This directory contains the January 2005 freeze of the human CAGE from RIKEN, Japan.
file descriptions.
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cage.rep_tag.chr*.gff.gz:
CAGE tag mapping information in each chromosomes.
this file is gff format.
this file format is GFF3 ver 1.0 format.
in the feature section,
"ID" : means rep_tag_id (also "Name")
"Target": contains tag alignment information.
"Note" : contains other fearture informations
- number of tags
- ctss_id
- tss_id (same as TC_id)
- tu_id
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