Source Name Comment [rna_tube] Comment [sample_name] Comment [organism] Comment [barcode] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [comment_on_rna] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 11299-117B3 11299-117B3 Mouse Aortic Smooth Muscle cells, donor1 Mus musculus CGATGT standard whole cell standard whole cell 11299-117B3.rna 11299-117B3.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:2438"; cell catalog:"M354-20"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.3; A260A280:2.13; A260A230:1.61 OP-SOLEXA-shortRNA-TruSeq-v2.0 1098 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10002 SRhi10002 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ bwa_aln unknown_sex_type Mouse%20Aortic%20Smooth%20Muscle%20cells%2c%20donor1.SRhi10002.11299-117B3.mm9.CGATGT.bam