Source Name Comment [rna_tube] Comment [sample_name] Comment [organism] Comment [barcode] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [comment_on_rna] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 11300-117B4 11300-117B4 Rat Aortic Smooth Muscle cells, donor1 Rattus norvegicus CGATGT standard whole cell standard whole cell 11300-117B4.rna 11300-117B4.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:2481"; cell catalog:"CAR35405"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.4; A260A280:2.04; A260A230:2.08 OP-SOLEXA-shortRNA-TruSeq-v2.0 1100 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10004 SRhi10004 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ bwa_aln unknown_sex_type Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor1.SRhi10004.11300-117B4.rn6.CGATGT.bam 11377-118A9 11377-118A9 Rat Aortic Smooth Muscle cells, donor2 Rattus norvegicus CGATGT standard whole cell standard whole cell 11377-118A9.rna 11377-118A9.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:1540"; cell catalog:"CAR35405"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:10; A260A280:2.1; A260A230:2.1 OP-SOLEXA-shortRNA-TruSeq-v2.0 1105 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10009 SRhi10009 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ bwa_aln female Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor2.SRhi10009.11377-118A9.rn6.CGATGT.bam 11449-118I9 11449-118I9 Rat Aortic Smooth Muscle cells, donor3 Rattus norvegicus ACTTGA standard whole cell standard whole cell 11449-118I9.rna 11449-118I9.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:1399"; cell catalog:"CAR35405"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.5; A260A280:2.03; A260A230:2.03 OP-SOLEXA-shortRNA-TruSeq-v2.0 1111 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10015 SRhi10015 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ bwa_aln male Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor3.SRhi10015.11449-118I9.rn6.ACTTGA.bam