2013-07-14
Marina Lizio (marina.lizio@riken.jp)
Inquiries to fantom-help@gsc.riken.jp or to data analysis provider, when available.
Phase1.1 contributing analyses folders.
This directory contains essentially same data as Phase1.0. for details on
content, see ../phase1.0/00_readme.txt 

ChangeLog
2013-02-07
*CAGE_peaks/hg19_cage_peaks*.gz have been updated from their original version. 
A label swap was found in the header section (CNhs12996 -temporal lobe tech_rep2- and CNhs12997 -duodenum failed to be lastly updated).
*Whole_genome_CTSS directory was added. It contains, per genome, whole genome CTSS and TSS expression.
2014-02-21 
Additional analysis results for human and mouse data is available.
*Sample_ontology_enrichment_of_CAGE_peaks contains enriched ontology terms for each sample.
*Sample_ontology_enrichment_of_coexpression clusters contains enriched ontology terms for each coexpression cluster.
*Repeat_expression contains relative expression of repeats-based CAGE peaks.
*Transcription_factors contains data on TF analyses. 
2014-05-02
DRA accessions available.
*DRA_accession_tables
2014-07-14
Additional cross-species analysis available in directory
*CAGE_peaks_Cross_species_projection