readme.txt
This folder contains data files used in the analysis described in Lizio et al. Folder CAGE_data contains the knock-down experiment data on 23 TFs (single TSS bed files and combined expression tables). Folder ChIP_data contains the ChIP-Seq experiment data on 4 TFs, peaks called, reproducible peaks (also divided into containing and not containing the motif). Folder DE_expression contains the results of edgeR (Robinson, 2010) differential expression analysis on the CAGE knock-down data. Folder Homer_motifs contains the motif analysis results for 4 TFs. Marina Lizio , Alistair Forrest
data/
Direct link to this directory:
| Name | Filesize | Last Modified |
|---|---|---|
 CAGE_data |
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| ChIP_data |
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| DE_expression |
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| HOMER_motifs |
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 Gene_ontology_S9.xlsx |
1.48 mb | Mar 09, 2018 |
| readme.txt |
644 b | Nov 19, 2015 |
| Files: 2 | Directories: 4 | ||