Personal tools

FFCP PHASE1:Mm9::chr9:45714981..45715004,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:45714981..45715004,-
|short_description=p3@Rnf214
|description=CAGE_peak_3_at_Rnf214_5end
|association_with_transcript=-4bp_to_ENSMUST00000160699_5end
|EntrezGene=235315
|EntrezGene=235315
|HGNC=
|HGNC=
|UniProt=Q8BFU3
|UniProt=Q8BFU3
|association_with_transcript=-4bp_to_ENSMUST00000160699_5end
|description=CAGE_peak_3_at_Rnf214_5end
|id=chr9:45714981..45715004,-
|ontology_enrichment_disease=
|phase1_expression=3.20297694209588,1.39590163055744,4.09499315450582,4.83942738090928,3.50627010962443,2.18243053485457,1.86890112476421,4.51931632045517,2.111830832275,2.34064526321993,0.34243593645101,0.957265907944037,4.28001824828014,6.38168937658681,5.66286595086627,3.23960427823721,5.59649502502517,4.41647031501533,3.70208970735495,3.39511721438424,6.4632900514813,2.28369187762036,2.61199789138935,2.23989391910769,2.52350209173887,3.44539178469012,0.86152399231815,1.72376986148711,2.66032787238923,3.02436155711917,2.66076612786366,1.90509202037889,3.07532393792285,0,1.1554064790051,0.997407872150954,1.02084678131185,4.60384793810598,2.3440060335714,3.14114246384279,8.82347232046521,5.46436387966757,2.91306211818692,2.51793635951155,3.4468156614635,1.83546752161682,3.12956537739216,2.39827672018491,3.07560655828261,3.4997381833371,3.21968769738334,7.18762821824858,4.36234775750115,3.62681071005672,6.04968838456435,2.57259436035947,6.01720223871389,5.15672092277442,9.91350658212029,7.93486468908049,10.1413024560989,2.03306719241479,4.4464739805557,0.899899717281399,1.97773272513395,1.4209602298922,1.79760066311043,2.30530983192933,5.91030790158323,8.50537411489651,5.25812403378455,5.71301968807607,7.06779331045163,7.96190194897201,6.70918297127655,13.7882817991503,2.20231761998777,6.76742891851495,7.37311359629969,7.38563211289086,6.67859798297591,6.77187381723788,6.14202597803038,3.37657566019008,8.40390362772456,10.9012576625257,9.681274294339,12.4887628702951,1.59025005999687,1.73814588245607,2.02905142091174,0.860423876981386,0.679971333707751,1.61910957491345,2.59910566979068,4.92829575807069,4.0728881838208,1.70430322578058,1.29893002301434,0.35333957451034,2.81686839553361,6.41632387071589,5.09610479413291,0,0.649473123033642,1.52015919285059,0,3.9964357901671,4.66088190564909,6.23456984072264,1.90833859442749,4.26251669636998,2.7673859670727,3.16517545160507,5.17390311397101,4.14699751387929,6.67426412882809,8.09756398751505,1.76922110389975,4.04417124868523,7.50861162765338,6.30337829075789,3.72783522436244,7.31951992528868,9.42510180660548,2.81002760729451,2.03685711660064,2.39961092397363,1.14363204365758,8.38827580667007,8.23501085073528,9.67538511269056,12.3415267336516,10.9957646652042,6.44142938134636,8.59878694259116,2.85150218780886,6.71797641294502,4.29628689337247,5.47148825304832,1.82168620147785,1.83921683546778,3.06105620669094,4.52114453507145,4.83059143974428,4.86832137082429,4.8724896771059,7.24369438069244,1.5089759505299,2.45837904218165,2.99116911078713,2.6303487891309,3.61461423993277,5.2237824978325,5.76189981942242,1.19420560091096,2.1066395619397,1.28673953557358,1.98914449576915,2.27838349789052,3.51789089971644,2.52086886045421,1.42046841351126,2.36117078096885,2.77680803197281,3.72054311600653,3.48755421819505,5.25444040652263,2.79751744852917,4.10418660197738,5.18840381093477,5.4093995347373,3.95190207523891,6.03928884421673,9.2527577368216,6.68879980465349,2.31293148088659,2.11560453330835,0.426576501070468,2.55460339046482,2.83508414908605,2.62188582010345,3.33567065767305,2.85338439168839,2.84717436926707,2.79988223030818,3.01602250560323,3.18330355265841,4.48417400373976,2.69645822596266,2.80979464837102,2.38969527905241,0.758671603812327,2.39921876480431,4.50830942692322,1.62921062276251,2.32742984601151,3.64706263429657,3.98390183882821,1.91893192373483,5.80895293013087,4.56569506510662,2.37162101669719,3.00321190288969,2.55526693647164,4.94696647246678,5.07150303471257,2.894125917029,3.05551022137704,4.31544206176216,7.13394997810156,3.29473695825698,8.62609239164127,4.83783231969054,4.36852742360385,3.03094653536534,1.79397413521912,6.75420929908714,4.24932337383191,1.89491411770485,0.977789858652155,3.05541154395339,3.98973422090454,1.84256883185997,5.47500374037832,5.26860849216057,3.62560831444239,3.10050565508285,4.14582398509466,3.93271955317771,3.9717545829156,4.77341893318988,9.04747703635634,3.80733978673097,3.44234991113325,3.58717770196152,7.70642831941401,5.86058432961016,0.819674726883377,6.5642441073137,1.89304931649754,3.90438744296638,4.52389135238878,2.15071918157297,4.23317480756549,6.22768367735431,6.47697122679831,4.38383786866968,3.95287777946523,13.4954952897159,1.56134093729095,0.712262414669021,2.60619134965722,2.47455184458803,9.2921596837974,2.18502572539483,1.209294227859,1.50884063804718,1.77181135728464,4.30409207121498,2.32585463851399,2.54473610634254,2.85197902707777,3.47640433729398,2.10837217149998,6.18813259489121,7.48967132658334,1.08036656418786,1.81102157295856,1.92903331528433,3.3694644392032,5.70780216326626,2.13913726782757,3.95804433848979,3.52007562095566,3.81297727554876,3.74898276693435,7.09010887648364,6.94297034792394,5.97097956788743,6.68485126417564,5.58079059133208,3.49777003955821,5.7481843623258,3.41741761595705,3.92135049130123,4.07427960213366,3.95573759709851,6.15124024744613,4.34678529092393,1.86976272993241,1.81936888020755,1.65839968565309,0.954670618015114,0.949007980743406,1.62655573701479,3.13215488383224,3.13632444021703,4.58561383866973,4.45052343069908,3.30613822901344,1.83229159388821,3.75883422546199,2.4853572523477,19.1655599152625,1.79419855252775,1.15820943319968,0.972255941720238,0.774958940866387,1.01373675294467,1.87771581833206,1.69265700297135,2.83120229949419,7.48910774560619,11.8092302565725,10.1123558601017,1.41907650703115,3.28675062927447,3.37794139742267,6.98204113103178,6.35780335300048,7.57231331975804,5.1691334511102,9.49084629512588,7.84930108546498,9.98179232854721,9.74578807397524,8.94770127255064,13.9083513596067,4.76133805591944,1.77588762699252,1.52513556236109,0.335769232728157,2.70465431645067,3.37828455812128,1.64836461840539,3.85863082342319,2.50786052017682,12.9892923801925,12.4287813856938,9.16632821503035,20.6223818812425,10.9613203163303,8.3093328712867,10.8003600037089,13.0593148935024,8.15656336171568,10.8729665467882,2.38710899443606,3.19219898720825,2.21953687480374,4.86213434136588,3.5634237646757,6.80220981265052,7.55638874525492,4.12070114477788,6.4183841918363,3.28506375292937,6.59046179714623,6.97917463128482,5.24392441831341,6.01836432605771,4.82457939227151,5.23923060411381,6.02598494913249,5.98018583437486,5.76920261124629,3.53277408322554,6.51451579532289,6.92155644021416,5.7224685587357,4.21504608233753,5.17601592284318,6.09225176820071,4.024415403201,3.41990624869196,3.93831930152999,5.61142271657738,5.45721083371201,6.40279135441163,7.36615877705441,4.95797891795091,4.82266527452853,6.49507502638659,6.78401664491684,5.37177635120746,7.26895661861605,5.07360263974886,4.63735671240843
|phase1_expression=3.20297694209588,1.39590163055744,4.09499315450582,4.83942738090928,3.50627010962443,2.18243053485457,1.86890112476421,4.51931632045517,2.111830832275,2.34064526321993,0.34243593645101,0.957265907944037,4.28001824828014,6.38168937658681,5.66286595086627,3.23960427823721,5.59649502502517,4.41647031501533,3.70208970735495,3.39511721438424,6.4632900514813,2.28369187762036,2.61199789138935,2.23989391910769,2.52350209173887,3.44539178469012,0.86152399231815,1.72376986148711,2.66032787238923,3.02436155711917,2.66076612786366,1.90509202037889,3.07532393792285,0,1.1554064790051,0.997407872150954,1.02084678131185,4.60384793810598,2.3440060335714,3.14114246384279,8.82347232046521,5.46436387966757,2.91306211818692,2.51793635951155,3.4468156614635,1.83546752161682,3.12956537739216,2.39827672018491,3.07560655828261,3.4997381833371,3.21968769738334,7.18762821824858,4.36234775750115,3.62681071005672,6.04968838456435,2.57259436035947,6.01720223871389,5.15672092277442,9.91350658212029,7.93486468908049,10.1413024560989,2.03306719241479,4.4464739805557,0.899899717281399,1.97773272513395,1.4209602298922,1.79760066311043,2.30530983192933,5.91030790158323,8.50537411489651,5.25812403378455,5.71301968807607,7.06779331045163,7.96190194897201,6.70918297127655,13.7882817991503,2.20231761998777,6.76742891851495,7.37311359629969,7.38563211289086,6.67859798297591,6.77187381723788,6.14202597803038,3.37657566019008,8.40390362772456,10.9012576625257,9.681274294339,12.4887628702951,1.59025005999687,1.73814588245607,2.02905142091174,0.860423876981386,0.679971333707751,1.61910957491345,2.59910566979068,4.92829575807069,4.0728881838208,1.70430322578058,1.29893002301434,0.35333957451034,2.81686839553361,6.41632387071589,5.09610479413291,0,0.649473123033642,1.52015919285059,0,3.9964357901671,4.66088190564909,6.23456984072264,1.90833859442749,4.26251669636998,2.7673859670727,3.16517545160507,5.17390311397101,4.14699751387929,6.67426412882809,8.09756398751505,1.76922110389975,4.04417124868523,7.50861162765338,6.30337829075789,3.72783522436244,7.31951992528868,9.42510180660548,2.81002760729451,2.03685711660064,2.39961092397363,1.14363204365758,8.38827580667007,8.23501085073528,9.67538511269056,12.3415267336516,10.9957646652042,6.44142938134636,8.59878694259116,2.85150218780886,6.71797641294502,4.29628689337247,5.47148825304832,1.82168620147785,1.83921683546778,3.06105620669094,4.52114453507145,4.83059143974428,4.86832137082429,4.8724896771059,7.24369438069244,1.5089759505299,2.45837904218165,2.99116911078713,2.6303487891309,3.61461423993277,5.2237824978325,5.76189981942242,1.19420560091096,2.1066395619397,1.28673953557358,1.98914449576915,2.27838349789052,3.51789089971644,2.52086886045421,1.42046841351126,2.36117078096885,2.77680803197281,3.72054311600653,3.48755421819505,5.25444040652263,2.79751744852917,4.10418660197738,5.18840381093477,5.4093995347373,3.95190207523891,6.03928884421673,9.2527577368216,6.68879980465349,2.31293148088659,2.11560453330835,0.426576501070468,2.55460339046482,2.83508414908605,2.62188582010345,3.33567065767305,2.85338439168839,2.84717436926707,2.79988223030818,3.01602250560323,3.18330355265841,4.48417400373976,2.69645822596266,2.80979464837102,2.38969527905241,0.758671603812327,2.39921876480431,4.50830942692322,1.62921062276251,2.32742984601151,3.64706263429657,3.98390183882821,1.91893192373483,5.80895293013087,4.56569506510662,2.37162101669719,3.00321190288969,2.55526693647164,4.94696647246678,5.07150303471257,2.894125917029,3.05551022137704,4.31544206176216,7.13394997810156,3.29473695825698,8.62609239164127,4.83783231969054,4.36852742360385,3.03094653536534,1.79397413521912,6.75420929908714,4.24932337383191,1.89491411770485,0.977789858652155,3.05541154395339,3.98973422090454,1.84256883185997,5.47500374037832,5.26860849216057,3.62560831444239,3.10050565508285,4.14582398509466,3.93271955317771,3.9717545829156,4.77341893318988,9.04747703635634,3.80733978673097,3.44234991113325,3.58717770196152,7.70642831941401,5.86058432961016,0.819674726883377,6.5642441073137,1.89304931649754,3.90438744296638,4.52389135238878,2.15071918157297,4.23317480756549,6.22768367735431,6.47697122679831,4.38383786866968,3.95287777946523,13.4954952897159,1.56134093729095,0.712262414669021,2.60619134965722,2.47455184458803,9.2921596837974,2.18502572539483,1.209294227859,1.50884063804718,1.77181135728464,4.30409207121498,2.32585463851399,2.54473610634254,2.85197902707777,3.47640433729398,2.10837217149998,6.18813259489121,7.48967132658334,1.08036656418786,1.81102157295856,1.92903331528433,3.3694644392032,5.70780216326626,2.13913726782757,3.95804433848979,3.52007562095566,3.81297727554876,3.74898276693435,7.09010887648364,6.94297034792394,5.97097956788743,6.68485126417564,5.58079059133208,3.49777003955821,5.7481843623258,3.41741761595705,3.92135049130123,4.07427960213366,3.95573759709851,6.15124024744613,4.34678529092393,1.86976272993241,1.81936888020755,1.65839968565309,0.954670618015114,0.949007980743406,1.62655573701479,3.13215488383224,3.13632444021703,4.58561383866973,4.45052343069908,3.30613822901344,1.83229159388821,3.75883422546199,2.4853572523477,19.1655599152625,1.79419855252775,1.15820943319968,0.972255941720238,0.774958940866387,1.01373675294467,1.87771581833206,1.69265700297135,2.83120229949419,7.48910774560619,11.8092302565725,10.1123558601017,1.41907650703115,3.28675062927447,3.37794139742267,6.98204113103178,6.35780335300048,7.57231331975804,5.1691334511102,9.49084629512588,7.84930108546498,9.98179232854721,9.74578807397524,8.94770127255064,13.9083513596067,4.76133805591944,1.77588762699252,1.52513556236109,0.335769232728157,2.70465431645067,3.37828455812128,1.64836461840539,3.85863082342319,2.50786052017682,12.9892923801925,12.4287813856938,9.16632821503035,20.6223818812425,10.9613203163303,8.3093328712867,10.8003600037089,13.0593148935024,8.15656336171568,10.8729665467882,2.38710899443606,3.19219898720825,2.21953687480374,4.86213434136588,3.5634237646757,6.80220981265052,7.55638874525492,4.12070114477788,6.4183841918363,3.28506375292937,6.59046179714623,6.97917463128482,5.24392441831341,6.01836432605771,4.82457939227151,5.23923060411381,6.02598494913249,5.98018583437486,5.76920261124629,3.53277408322554,6.51451579532289,6.92155644021416,5.7224685587357,4.21504608233753,5.17601592284318,6.09225176820071,4.024415403201,3.41990624869196,3.93831930152999,5.61142271657738,5.45721083371201,6.40279135441163,7.36615877705441,4.95797891795091,4.82266527452853,6.49507502638659,6.78401664491684,5.37177635120746,7.26895661861605,5.07360263974886,4.63735671240843
|short_description=p3@Rnf214
}}
}}

Revision as of 03:04, 19 April 2012

Short description:p3@Rnf214
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf214_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_ENSMUST00000160699_5end
EntrezGene:Rnf214
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf214

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D76.23
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A67.51
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D53.98
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H35.97
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E211.81
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C49.49
thymus, neonate N07.CNhs11211.713-19D37.85
thymus, neonate N10.CNhs11194.748-24E49.98
thymus, neonate N20.CNhs11186.820-7A29.75
thymus, neonate N25.CNhs11125.1362-25G78.95
thymus, neonate N30.CNhs11132.1393-42G213.91
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:45714981..45715004,-&oldid=1009285"