Personal tools

FFCP PHASE1:Mm9::chr8:108225042..108225090,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Pard6a_5end
|description=CAGE_peak_1_at_Pard6a_5end
|id=chr8:108225042..108225090,+
|id=chr8:108225042..108225090,+
|ontology_enrichment_celltype=CL:0000221!3.73e-14!44;CL:0000133!3.73e-14!44;CL:0002319!1.22e-13!43;CL:0000055!1.82e-13!50;CL:0000723!6.99e-12!91;CL:0000048!6.99e-12!91;CL:0000034!9.72e-11!97;CL:0000393!2.24e-09!39;CL:0000211!2.24e-09!39;CL:0000540!6.44e-09!33;CL:0000047!6.44e-09!33;CL:0000031!6.44e-09!33;CL:0000404!6.44e-09!33;CL:0002371!7.68e-09!118;CL:0000548!7.98e-09!115;CL:0000004!7.98e-09!115;CL:0000255!7.98e-09!115;CL:0000144!5.05e-08!121;CL:0000012!5.05e-08!121;CL:0000117!8.05e-08!23;CL:0000337!8.05e-08!23;CL:0000219!3.56e-07!54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=13.1322054625931,2.09385244583617,2.27499619694768,2.41971369045464,3.00537437967808,2.51818907867835,4.20502753071946,6.32704284863724,5.77233760821834,6.31974221069382,4.96532107853964,3.98860794976682,6.50562773738582,10.2281870830227,6.66219523631325,9.11138703254217,11.1929900500503,9.14840279538889,6.7186072466812,8.48779303596061,11.8210173309987,18.5674078745655,17.5003858723087,4.63978026100879,6.42345986988076,1.72269589234506,4.30761996159075,4.30942465371778,2.85035129184561,2.52030129759931,3.54768817048488,19.6859508772486,19.6820732027062,0,4.33277429626912,5.98444723290572,5.9209113316087,6.69650609179052,9.37602413428561,5.23523743973798,12.9410927366823,6.83045484958446,7.2826552954673,6.79842817068117,6.18399280439039,6.60768307782054,26.6013057078333,30.3054967368821,17.7945808014922,16.9154012194627,17.0783434382942,18.6878333674463,13.5903910906766,5.80289713609076,7.05796978199174,8.2323019531503,13.1805382371828,10.8291139378263,9.91350658212029,13.7537654610729,8.87363964908651,9.4876468979357,16.0073063300005,15.2982951937838,10.8775299882367,11.3676818391376,24.2676089519908,43.4166685013357,8.08778976006126,12.5555522648472,10.9368979902719,10.5690864229407,13.0312439161452,11.1466627285608,10.6388472830242,17.4651569455904,9.91042928994498,6.51205424234457,8.60196586234964,10.0233578674947,11.8933936683133,8.33461392890816,9.49222196604695,8.4414391504752,9.62628960993904,7.07108605136802,7.68807076315156,7.82877672466262,6.28527404665428,9.06858721281426,9.56552812715537,5.16254326188832,2.03991400112325,9.17495425784289,7.14754059192436,6.2723764193627,7.72444310724635,7.49893419343454,8.83272415649754,8.12681021373782,12.5350643601246,7.69958864485907,0,0,8.44315059943735,5.06719730950197,4.04419556011827,5.48082622651488,2.33044095282455,4.45326417194474,8.50078101154066,7.61163695780353,5.5347719341454,8.28974523039424,3.88042733547826,4.90099706185734,4.44950941921873,6.36237170447611,8.84610551949874,5.82360659810673,5.74187947997023,5.81850303762267,3.72783522436244,6.73395833126558,9.00620839297857,4.59822699375465,5.27186547826049,5.99902730993408,9.53026703047985,9.73639156131348,8.6925114535539,8.79580464790051,7.12679712788333,9.71718737855256,8.10373373782284,7.94982189032012,5.90668310331835,7.58882520721567,9.60346482047964,4.8401626853889,7.54698569183682,7.81667155073808,10.0834792690996,8.28876498096433,5.98721192531685,7.55870949680614,8.71426038405478,6.98499100995342,4.95806383745537,5.10586416453112,6.862093842394,6.79506770525482,7.50727572909114,4.179025998266,7.81972118350185,6.56813080501028,18.2575428701441,8.74982884190032,4.83077948972507,6.21377317606506,6.56672967947069,5.76198596675248,4.26140524053378,6.68998387941173,6.63348585415727,8.37122201101468,5.633741429392,3.38619492864792,5.10135534731789,7.05920095540109,6.16122952548504,7.74859933354261,6.14740322814942,7.78397228810156,7.14985825118033,7.82075054082562,6.60837565967596,3.96675849995316,5.54549451391608,4.87697010906921,4.38149368495117,5.04208811558356,5.33707305227689,8.17970192284004,5.69434873853414,2.9645811850322,8.79673230800943,5.57078121715222,4.874102177978,2.69645822596266,3.24207074812041,3.78368419183298,6.63837653335786,6.85491075658373,4.50830942692322,5.09128319613286,4.26695471768777,3.08597607517402,5.05892296994058,3.54264355151045,6.59394656933774,6.91024117962083,7.11486305009157,6.17326891149548,4.91397487783007,6.74586337154561,6.49152388443209,5.06472035480075,6.62027214631691,3.74004978686054,3.24270453550071,2.74561413188081,2.87536413054709,5.20997326735905,4.99260276983297,5.30415643688935,2.69096120282868,4.3419916922703,7.20537441649758,6.06372517665551,5.70377417547091,7.46878377410828,8.68353918667458,5.69521275302174,5.2369600994923,4.29294025287157,5.51723004371669,4.65075848262427,4.30527875375215,5.73521601505083,5.35323443784276,7.23245292907558,9.04747703635634,6.52686820582452,6.88469982226651,4.69092468718045,8.83028244932856,7.2671245687166,7.86887737808042,9.3414243065618,6.94118082715765,8.58965237452605,9.47862950024315,6.93009514062401,7.12955757063661,6.22768367735431,8.50102473517278,10.5212108848072,7.90575555893047,6.74774764485795,6.52924391958036,7.47875535402472,4.72372182125371,6.59880491890142,3.98235415019888,4.37005145078967,6.65111825322452,4.71512699389745,7.38254732201932,8.30074899448604,4.13485269069154,3.63533729477506,4.27796854061666,3.79244109522979,6.32511651449993,3.09406629744561,14.6389030474129,10.6236045478473,11.9009989080134,9.00215547132688,11.8817956540323,14.6262430433698,15.9612549984057,21.6170113871366,3.75474732901937,5.2958017715955,5.29268155331909,5.11147384118588,3.06782410722221,4.1012788951146,5.96861720015682,4.26766339337159,3.49777003955821,7.78786268444141,7.00570611271196,5.98521917093345,5.74103034846106,6.40452753815949,7.38148829693536,7.54967971581525,4.75939603982795,6.01791244991729,4.00779924032829,4.77335309007557,3.63786392618306,5.89626454667861,4.21220829205025,5.43629569637619,6.55087691238533,6.20375993370175,4.46328660916814,3.66458318777641,5.31421390496351,5.59205381778233,78.9170114157866,3.88743019714345,7.44563207056939,8.94475466382619,6.97463046779748,7.94093789806657,3.75543163666413,4.4269490846943,3.67007705489988,36.4792022447269,36.5798107947489,9.16432249821717,5.0681303822541,6.98434508720825,7.27556608675652,5.37080087002444,6.15912199821921,5.16840432935866,6.64602872285597,5.75508764704442,6.62999217898499,5.14213544197887,5.65255708290564,6.25376970662141,8.76576766361767,4.76133805591944,8.21348027484039,7.08739467214858,5.70807695637867,5.79568782096571,7.50729901804728,4.57879060668163,7.28852488868824,2.50786052017682,16.3778034358949,12.4287813856938,8.59343270159095,10.998603669996,12.3314853558716,12.8416962556249,9.45031500324528,9.90706647093285,12.2348450425735,12.4262474820437,6.01966615988225,5.58634822761443,9.39034831647738,5.10524105843418,5.65955539095552,8.08911437180062,5.55616819504038,6.18105171716683,9.62757628775446,8.08631077644152,7.09742039692671,6.41329560712659,6.83583004530142,5.89031402124797,5.57124048869449,7.62069906052918,5.2147946675185,4.24400285020151,6.59337441285291,6.62395140604788,6.17164654293748,4.61437096014278,3.81497903915713,6.54058874845478,5.08190654242785,7.02301245500915,8.23175877927476,6.05060336307039,5.16055632614275,10.1005608898393,5.57584585183618,4.33419722452479,4.91077251803627,3.71848418846318,6.94463799532109,8.24374907195222,7.01794825336225,6.23126056740065,5.54736162999646,7.50010825006353,7.41977073985349
|phase1_expression=13.1322054625931,2.09385244583617,2.27499619694768,2.41971369045464,3.00537437967808,2.51818907867835,4.20502753071946,6.32704284863724,5.77233760821834,6.31974221069382,4.96532107853964,3.98860794976682,6.50562773738582,10.2281870830227,6.66219523631325,9.11138703254217,11.1929900500503,9.14840279538889,6.7186072466812,8.48779303596061,11.8210173309987,18.5674078745655,17.5003858723087,4.63978026100879,6.42345986988076,1.72269589234506,4.30761996159075,4.30942465371778,2.85035129184561,2.52030129759931,3.54768817048488,19.6859508772486,19.6820732027062,0,4.33277429626912,5.98444723290572,5.9209113316087,6.69650609179052,9.37602413428561,5.23523743973798,12.9410927366823,6.83045484958446,7.2826552954673,6.79842817068117,6.18399280439039,6.60768307782054,26.6013057078333,30.3054967368821,17.7945808014922,16.9154012194627,17.0783434382942,18.6878333674463,13.5903910906766,5.80289713609076,7.05796978199174,8.2323019531503,13.1805382371828,10.8291139378263,9.91350658212029,13.7537654610729,8.87363964908651,9.4876468979357,16.0073063300005,15.2982951937838,10.8775299882367,11.3676818391376,24.2676089519908,43.4166685013357,8.08778976006126,12.5555522648472,10.9368979902719,10.5690864229407,13.0312439161452,11.1466627285608,10.6388472830242,17.4651569455904,9.91042928994498,6.51205424234457,8.60196586234964,10.0233578674947,11.8933936683133,8.33461392890816,9.49222196604695,8.4414391504752,9.62628960993904,7.07108605136802,7.68807076315156,7.82877672466262,6.28527404665428,9.06858721281426,9.56552812715537,5.16254326188832,2.03991400112325,9.17495425784289,7.14754059192436,6.2723764193627,7.72444310724635,7.49893419343454,8.83272415649754,8.12681021373782,12.5350643601246,7.69958864485907,0,0,8.44315059943735,5.06719730950197,4.04419556011827,5.48082622651488,2.33044095282455,4.45326417194474,8.50078101154066,7.61163695780353,5.5347719341454,8.28974523039424,3.88042733547826,4.90099706185734,4.44950941921873,6.36237170447611,8.84610551949874,5.82360659810673,5.74187947997023,5.81850303762267,3.72783522436244,6.73395833126558,9.00620839297857,4.59822699375465,5.27186547826049,5.99902730993408,9.53026703047985,9.73639156131348,8.6925114535539,8.79580464790051,7.12679712788333,9.71718737855256,8.10373373782284,7.94982189032012,5.90668310331835,7.58882520721567,9.60346482047964,4.8401626853889,7.54698569183682,7.81667155073808,10.0834792690996,8.28876498096433,5.98721192531685,7.55870949680614,8.71426038405478,6.98499100995342,4.95806383745537,5.10586416453112,6.862093842394,6.79506770525482,7.50727572909114,4.179025998266,7.81972118350185,6.56813080501028,18.2575428701441,8.74982884190032,4.83077948972507,6.21377317606506,6.56672967947069,5.76198596675248,4.26140524053378,6.68998387941173,6.63348585415727,8.37122201101468,5.633741429392,3.38619492864792,5.10135534731789,7.05920095540109,6.16122952548504,7.74859933354261,6.14740322814942,7.78397228810156,7.14985825118033,7.82075054082562,6.60837565967596,3.96675849995316,5.54549451391608,4.87697010906921,4.38149368495117,5.04208811558356,5.33707305227689,8.17970192284004,5.69434873853414,2.9645811850322,8.79673230800943,5.57078121715222,4.874102177978,2.69645822596266,3.24207074812041,3.78368419183298,6.63837653335786,6.85491075658373,4.50830942692322,5.09128319613286,4.26695471768777,3.08597607517402,5.05892296994058,3.54264355151045,6.59394656933774,6.91024117962083,7.11486305009157,6.17326891149548,4.91397487783007,6.74586337154561,6.49152388443209,5.06472035480075,6.62027214631691,3.74004978686054,3.24270453550071,2.74561413188081,2.87536413054709,5.20997326735905,4.99260276983297,5.30415643688935,2.69096120282868,4.3419916922703,7.20537441649758,6.06372517665551,5.70377417547091,7.46878377410828,8.68353918667458,5.69521275302174,5.2369600994923,4.29294025287157,5.51723004371669,4.65075848262427,4.30527875375215,5.73521601505083,5.35323443784276,7.23245292907558,9.04747703635634,6.52686820582452,6.88469982226651,4.69092468718045,8.83028244932856,7.2671245687166,7.86887737808042,9.3414243065618,6.94118082715765,8.58965237452605,9.47862950024315,6.93009514062401,7.12955757063661,6.22768367735431,8.50102473517278,10.5212108848072,7.90575555893047,6.74774764485795,6.52924391958036,7.47875535402472,4.72372182125371,6.59880491890142,3.98235415019888,4.37005145078967,6.65111825322452,4.71512699389745,7.38254732201932,8.30074899448604,4.13485269069154,3.63533729477506,4.27796854061666,3.79244109522979,6.32511651449993,3.09406629744561,14.6389030474129,10.6236045478473,11.9009989080134,9.00215547132688,11.8817956540323,14.6262430433698,15.9612549984057,21.6170113871366,3.75474732901937,5.2958017715955,5.29268155331909,5.11147384118588,3.06782410722221,4.1012788951146,5.96861720015682,4.26766339337159,3.49777003955821,7.78786268444141,7.00570611271196,5.98521917093345,5.74103034846106,6.40452753815949,7.38148829693536,7.54967971581525,4.75939603982795,6.01791244991729,4.00779924032829,4.77335309007557,3.63786392618306,5.89626454667861,4.21220829205025,5.43629569637619,6.55087691238533,6.20375993370175,4.46328660916814,3.66458318777641,5.31421390496351,5.59205381778233,78.9170114157866,3.88743019714345,7.44563207056939,8.94475466382619,6.97463046779748,7.94093789806657,3.75543163666413,4.4269490846943,3.67007705489988,36.4792022447269,36.5798107947489,9.16432249821717,5.0681303822541,6.98434508720825,7.27556608675652,5.37080087002444,6.15912199821921,5.16840432935866,6.64602872285597,5.75508764704442,6.62999217898499,5.14213544197887,5.65255708290564,6.25376970662141,8.76576766361767,4.76133805591944,8.21348027484039,7.08739467214858,5.70807695637867,5.79568782096571,7.50729901804728,4.57879060668163,7.28852488868824,2.50786052017682,16.3778034358949,12.4287813856938,8.59343270159095,10.998603669996,12.3314853558716,12.8416962556249,9.45031500324528,9.90706647093285,12.2348450425735,12.4262474820437,6.01966615988225,5.58634822761443,9.39034831647738,5.10524105843418,5.65955539095552,8.08911437180062,5.55616819504038,6.18105171716683,9.62757628775446,8.08631077644152,7.09742039692671,6.41329560712659,6.83583004530142,5.89031402124797,5.57124048869449,7.62069906052918,5.2147946675185,4.24400285020151,6.59337441285291,6.62395140604788,6.17164654293748,4.61437096014278,3.81497903915713,6.54058874845478,5.08190654242785,7.02301245500915,8.23175877927476,6.05060336307039,5.16055632614275,10.1005608898393,5.57584585183618,4.33419722452479,4.91077251803627,3.71848418846318,6.94463799532109,8.24374907195222,7.01794825336225,6.23126056740065,5.54736162999646,7.50010825006353,7.41977073985349
|short_description=p1@Pard6a
|short_description=p1@Pard6a
}}
}}

Revision as of 05:07, 19 April 2012

Short description:p1@Pard6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pard6a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098444, NM_001047436, uc009ndu.1_5end
EntrezGene:Pard6a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pard6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C824.27
Mouse Microglia, donor2.CNhs12634.11736-123E843.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D96.29
Mouse Schwann, donor2.CNhs12573.11746-123F99.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I29.01
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G88.71
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D55.06
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C57.47
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.34
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E610.62
pituitary gland, embryo E13.CNhs11009.370-44C711.90
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F614.63
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E921.62
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G578.92
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H336.48
testis, neonate N30.CNhs11130.1391-42E236.58
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I26.98
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F85.17
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C45.76
thymus, neonate N07.CNhs11211.713-19D36.63
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A25.65
thymus, neonate N25.CNhs11125.1362-25G76.25
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.71
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:108225042..108225090,%2B&oldid=1026928"