Personal tools

FFCP PHASE1:Mm9::chr9:107853283..107853322,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Traip_5end
|description=CAGE_peak_1_at_Traip_5end
|id=chr9:107853283..107853322,+
|id=chr9:107853283..107853322,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.6787927191189,1.40167584357315,0.774739940649458,0.140788722151667,0,1.19852577757853,0.558405112967355,1.19840510951844,0.699363219351979,5.3297561890506,8.50396123037269,13.9912375625629,3.47008381894061,2.74228867211478,3.39511721438424,2.46625541438102,6.55320277925843,7.31359409589019,2.23989391910769,2.75291137280604,1.14846392823004,1.7230479846363,1.07735616342945,1.33016393619462,2.52030129759931,3.10422714917427,20.9560122241678,21.52726756546,15.8481681015439,10.3986583110459,9.47537478543406,6.53341940039581,5.4409111995798,6.2506827561904,7.32933241563318,1.17646297606203,2.04913645487534,5.34061388334269,1.1330713617802,1.01376931219515,0.917733760808408,1.56478268869608,2.8343270329458,0.219686182734472,1.36100929351998,2.79972843250725,1.43752564364972,2.01339127269284,1.45072428402269,1.68046899571232,1.28629718017973,1.14613375975503,0.515672092277442,1.82084814773638,1.05798195854407,3.1691570175309,2.71075625655306,1.77858959222228,0.449949858640699,0,0,1.19840044207362,1.15265491596466,4.76972216618997,4.3201900266141,5.04779907243317,1.99955689082663,0.883474163806454,5.75706756310284,8.05101956553185,6.43453150627015,0,0.255374676170375,0.46081959976873,1.97829431595291,1.55528994124096,1.56274011167028,1.3959149950069,0,0.763991238884051,1.47314292736834,0.996601765593721,1.1183966749518,1.06016670666458,4.23200736597999,0,0.860423876981386,0,0.539703191637817,0,0,0.983110940922263,2.38602451609281,4.93593408745451,3.18005617059306,1.83096445709685,5.13305909657271,2.54805239706646,0,8.22665955842614,6.84071636782766,5.05524445014783,1.25602267690966,1.8125651855302,0.742210695324124,10.0621489524359,1.82679286987285,3.68984795609694,2.71300752994721,2.11659672844269,1.38233250462643,0,0.433798070759735,2.65383165584962,4.20593809863264,7.06692859073259,11.1521308221101,1.86391761218122,1.17112318804619,1.04723353406728,1.53274233125155,8.8663192134381,3.59941638596045,8.00542430560307,0,0,3.26701315493447,0.173824320192276,1.27857728665165,0,0.162241263067758,5.90668310331835,3.85661608891288,0.758168275301024,0.420883711772948,8.58794923553845,11.0353010128067,5.58192602396583,6.32960234910003,7.96027040070536,6.14945857367279,5.15359485078509,0.776110112217047,9.26942369611222,5.67318240503458,5.63043597324636,4.3839146485515,4.44875598760957,3.83077383174383,3.08673204611915,5.57295947091781,7.02213187313235,8.74982884190032,12.5031939734061,5.17814431338755,4.92504725960302,5.40186184383045,6.39210786080068,5.70616272067471,4.01094493507183,4.41814495025775,5.36546802799238,3.26942958628075,4.44311594766397,1.80584210487005,0.648550476366846,0.146199987425332,0.219550115291051,0.805238512562231,0.420579897128254,2.46971069710283,0.330418782983798,1.58670339998127,9.17139477301506,7.89604684325491,6.31450560478257,7.05892336181699,3.7804267453628,2.66315876557583,4.2707615539006,1.4822905925161,2.01068167040216,2.58643413653496,2.33956904542944,0.898819408654221,3.02593269824572,1.7922714592893,6.44870863240478,8.3401414205102,7.88954149711563,5.90588850751411,4.84881217919064,3.85747009396752,2.08680572510049,0.295220295959204,0.31399745568275,1.48076596706161,0,9.17648081438517,7.86235980452812,11.6928298440124,6.6943840058206,10.1294407096015,6.3656462945355,2.87696137450811,5.18832725680113,5.76578967694971,2.87536413054709,2.23284568601102,2.49630138491648,2.27320990152401,2.51156378930677,0.482443521363367,0.369506380333209,8.7166049414423,11.7334783038259,8.82674446030978,9.15291968325158,1.67506257441816,1.90434912708811,1.17080188714679,2.83743259391144,4.4292937929755,1.59454768657487,1.80249646187312,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,2.95058563811422,1.93155722413313,0.963303539926752,0.234423373184406,2.78689407140348,1.26235463602186,6.31016438832513,6.24701990874622,6.03185513651837,5.01834475700359,4.01037613348309,2.54768877709949,8.09621403349789,3.79932615284705,3.55759000151871,0.963963949265421,1.70328102249922,5.34196811001766,6.35259141478947,1.15479086080775,0,5.34117399540959,11.1859716076958,3.39489143560617,2.06711325016541,1.84461088766356,1.80899805217755,3.27180356529755,7.12994756769443,2.52829406348653,1.05418608574999,3.09406629744561,0,7.74262704334634,6.33857550535497,3.42939256050548,2.83744373827638,1.78368817602071,3.78462747384878,3.65357938937519,3.52007562095566,0.42366414172764,0,1.15420377059036,3.22928853391811,7.11692514152239,5.72987251215055,2.79039529566604,2.62332752966866,0.741701208042039,6.66396435111626,8.04908785056568,10.7412825874433,14.1276342753518,10.1153728513559,9.37990510146743,4.58941760983409,5.17820373597535,5.38979897837253,0,9.17374381385292,5.28630614529807,6.58832579012988,5.01811910434725,2.40198820120795,4.04593039154462,4.29797969771747,1.04702376793612,1.68499465279331,0,3.38215763210514,7.32631075615496,8.93475848468327,7.19469396872976,6.19967152693109,6.9272011451219,6.45464812551647,7.68205870579306,6.8158573876712,10.3881171955183,7.20075015644664,3.16011120628178,11.149886840959,9.44940805916411,8.83461596249006,7.16106782669926,7.9472541912506,9.61563596159751,8.71368210330006,12.2169404437259,10.6689529317,8.87270429204197,4.48306251402861,7.31209996466504,8.18138315270983,0.680191150845634,8.21348027484039,9.240527230776,9.56942313275247,0.772758376128762,0.375364950902364,1.46521299413812,1.07184189539533,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,1.37016503954128,0,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,7.88783841639743,8.77854721482268,6.4878770186571,5.34834777550247,4.61148957781561,3.8607136774503,1.55572709461131,2.88449080134452,1.60459604795908,3.79045817645696,2.02783439912192,3.2066478035633,4.12022632867483,3.00918216302886,4.02048282689293,1.90517476513229,2.78122382267653,3.6652751888104,2.47251540481984,2.20798380201596,1.37147700954166,3.01708870470874,2.38436189947321,3.0522747492789,3.19971893412124,2.03075058940024,4.024415403201,2.36762740294059,2.03706170768793,2.24456908663095,2.96587545310435,2.26560309463796,2.86461730218783,2.32405261778949,3.08650577569826,1.99848462350357,3.97683734357194,1.93383948643468,1.91288332068843,2.20591419119516,1.15933917810211
|phase1_expression=1.92178616525753,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.6787927191189,1.40167584357315,0.774739940649458,0.140788722151667,0,1.19852577757853,0.558405112967355,1.19840510951844,0.699363219351979,5.3297561890506,8.50396123037269,13.9912375625629,3.47008381894061,2.74228867211478,3.39511721438424,2.46625541438102,6.55320277925843,7.31359409589019,2.23989391910769,2.75291137280604,1.14846392823004,1.7230479846363,1.07735616342945,1.33016393619462,2.52030129759931,3.10422714917427,20.9560122241678,21.52726756546,15.8481681015439,10.3986583110459,9.47537478543406,6.53341940039581,5.4409111995798,6.2506827561904,7.32933241563318,1.17646297606203,2.04913645487534,5.34061388334269,1.1330713617802,1.01376931219515,0.917733760808408,1.56478268869608,2.8343270329458,0.219686182734472,1.36100929351998,2.79972843250725,1.43752564364972,2.01339127269284,1.45072428402269,1.68046899571232,1.28629718017973,1.14613375975503,0.515672092277442,1.82084814773638,1.05798195854407,3.1691570175309,2.71075625655306,1.77858959222228,0.449949858640699,0,0,1.19840044207362,1.15265491596466,4.76972216618997,4.3201900266141,5.04779907243317,1.99955689082663,0.883474163806454,5.75706756310284,8.05101956553185,6.43453150627015,0,0.255374676170375,0.46081959976873,1.97829431595291,1.55528994124096,1.56274011167028,1.3959149950069,0,0.763991238884051,1.47314292736834,0.996601765593721,1.1183966749518,1.06016670666458,4.23200736597999,0,0.860423876981386,0,0.539703191637817,0,0,0.983110940922263,2.38602451609281,4.93593408745451,3.18005617059306,1.83096445709685,5.13305909657271,2.54805239706646,0,8.22665955842614,6.84071636782766,5.05524445014783,1.25602267690966,1.8125651855302,0.742210695324124,10.0621489524359,1.82679286987285,3.68984795609694,2.71300752994721,2.11659672844269,1.38233250462643,0,0.433798070759735,2.65383165584962,4.20593809863264,7.06692859073259,11.1521308221101,1.86391761218122,1.17112318804619,1.04723353406728,1.53274233125155,8.8663192134381,3.59941638596045,8.00542430560307,0,0,3.26701315493447,0.173824320192276,1.27857728665165,0,0.162241263067758,5.90668310331835,3.85661608891288,0.758168275301024,0.420883711772948,8.58794923553845,11.0353010128067,5.58192602396583,6.32960234910003,7.96027040070536,6.14945857367279,5.15359485078509,0.776110112217047,9.26942369611222,5.67318240503458,5.63043597324636,4.3839146485515,4.44875598760957,3.83077383174383,3.08673204611915,5.57295947091781,7.02213187313235,8.74982884190032,12.5031939734061,5.17814431338755,4.92504725960302,5.40186184383045,6.39210786080068,5.70616272067471,4.01094493507183,4.41814495025775,5.36546802799238,3.26942958628075,4.44311594766397,1.80584210487005,0.648550476366846,0.146199987425332,0.219550115291051,0.805238512562231,0.420579897128254,2.46971069710283,0.330418782983798,1.58670339998127,9.17139477301506,7.89604684325491,6.31450560478257,7.05892336181699,3.7804267453628,2.66315876557583,4.2707615539006,1.4822905925161,2.01068167040216,2.58643413653496,2.33956904542944,0.898819408654221,3.02593269824572,1.7922714592893,6.44870863240478,8.3401414205102,7.88954149711563,5.90588850751411,4.84881217919064,3.85747009396752,2.08680572510049,0.295220295959204,0.31399745568275,1.48076596706161,0,9.17648081438517,7.86235980452812,11.6928298440124,6.6943840058206,10.1294407096015,6.3656462945355,2.87696137450811,5.18832725680113,5.76578967694971,2.87536413054709,2.23284568601102,2.49630138491648,2.27320990152401,2.51156378930677,0.482443521363367,0.369506380333209,8.7166049414423,11.7334783038259,8.82674446030978,9.15291968325158,1.67506257441816,1.90434912708811,1.17080188714679,2.83743259391144,4.4292937929755,1.59454768657487,1.80249646187312,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,2.95058563811422,1.93155722413313,0.963303539926752,0.234423373184406,2.78689407140348,1.26235463602186,6.31016438832513,6.24701990874622,6.03185513651837,5.01834475700359,4.01037613348309,2.54768877709949,8.09621403349789,3.79932615284705,3.55759000151871,0.963963949265421,1.70328102249922,5.34196811001766,6.35259141478947,1.15479086080775,0,5.34117399540959,11.1859716076958,3.39489143560617,2.06711325016541,1.84461088766356,1.80899805217755,3.27180356529755,7.12994756769443,2.52829406348653,1.05418608574999,3.09406629744561,0,7.74262704334634,6.33857550535497,3.42939256050548,2.83744373827638,1.78368817602071,3.78462747384878,3.65357938937519,3.52007562095566,0.42366414172764,0,1.15420377059036,3.22928853391811,7.11692514152239,5.72987251215055,2.79039529566604,2.62332752966866,0.741701208042039,6.66396435111626,8.04908785056568,10.7412825874433,14.1276342753518,10.1153728513559,9.37990510146743,4.58941760983409,5.17820373597535,5.38979897837253,0,9.17374381385292,5.28630614529807,6.58832579012988,5.01811910434725,2.40198820120795,4.04593039154462,4.29797969771747,1.04702376793612,1.68499465279331,0,3.38215763210514,7.32631075615496,8.93475848468327,7.19469396872976,6.19967152693109,6.9272011451219,6.45464812551647,7.68205870579306,6.8158573876712,10.3881171955183,7.20075015644664,3.16011120628178,11.149886840959,9.44940805916411,8.83461596249006,7.16106782669926,7.9472541912506,9.61563596159751,8.71368210330006,12.2169404437259,10.6689529317,8.87270429204197,4.48306251402861,7.31209996466504,8.18138315270983,0.680191150845634,8.21348027484039,9.240527230776,9.56942313275247,0.772758376128762,0.375364950902364,1.46521299413812,1.07184189539533,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,1.37016503954128,0,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,7.88783841639743,8.77854721482268,6.4878770186571,5.34834777550247,4.61148957781561,3.8607136774503,1.55572709461131,2.88449080134452,1.60459604795908,3.79045817645696,2.02783439912192,3.2066478035633,4.12022632867483,3.00918216302886,4.02048282689293,1.90517476513229,2.78122382267653,3.6652751888104,2.47251540481984,2.20798380201596,1.37147700954166,3.01708870470874,2.38436189947321,3.0522747492789,3.19971893412124,2.03075058940024,4.024415403201,2.36762740294059,2.03706170768793,2.24456908663095,2.96587545310435,2.26560309463796,2.86461730218783,2.32405261778949,3.08650577569826,1.99848462350357,3.97683734357194,1.93383948643468,1.91288332068843,2.20591419119516,1.15933917810211
|short_description=p1@Traip
|short_description=p1@Traip
}}
}}

Revision as of 06:41, 19 April 2012

Short description:p1@Traip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Traip_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000049348, NM_011634, uc009rnn.1_5end
EntrezGene:Traip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Traip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F94.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.01
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F88.34
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E111.69
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F811.73
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C76.34
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D114.13
spleen, neonate N20.CNhs11112.824-19H110.12
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H310.39
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I29.45
thymus, embryo E16.CNhs11002.456-26C58.83
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F89.62
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C412.22
thymus, neonate N07.CNhs11211.713-19D310.67
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G77.31
thymus, neonate N30.CNhs11132.1393-42G28.18
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.57
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I87.89
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:107853283..107853322,%2B&oldid=1038029"