Personal tools

FFCP PHASE1:Mm9::chrX:71032341..71032356,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Ssr4_5end
|description=CAGE_peak_3_at_Ssr4_5end
|id=chrX:71032341..71032356,+
|id=chrX:71032341..71032356,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,10.8182376368202,10.0099832665698,6.95667686005709,12.0214975187123,2.68606835059024,2.10251376535973,3.09895976259783,0.281577444303333,0.234064526321993,0.513653904676515,0.398860794976682,3.42401459862411,1.92324885321794,2.6648780945253,2.22722794128809,5.59649502502517,1.41957974411207,0.685572168028694,2.12194825899015,3.57181818634493,0.397163804803541,0.261199789138935,4.7997726838022,7.11168771308227,12.0588712464154,9.90752591165872,5.817723282519,12.9215925230334,15.3738379153558,3.54768817048488,1.90509202037889,3.07532393792285,0,3.17736781726402,4.98703936075477,3.67504841272264,0.418531630736908,2.3440060335714,1.0470474879476,3.52938892818609,2.04913645487534,2.91306211818692,2.39203954153597,2.83855407414641,1.46837401729345,9.38869613217647,6.75877984779384,4.17403747195497,6.9994763666742,3.77963338388479,11.5002051491977,0.838913030288682,1.45072428402269,1.00828139742739,0.514518872071894,1.14613375975503,1.03134418455488,2.02316460859598,3.70293685490423,5.07065122804943,5.42151251310611,11.5608323494448,0.899899717281399,2.96659908770092,3.5524005747305,5.69240209984969,11.1423308543251,2.90330914463737,1.21505344498522,1.47227472945967,4.28476476605705,3.75476519617743,2.81728838194394,4.50473713785711,5.51531271966013,3.30347642998166,3.70293280447044,4.45458946443106,2.50583946687368,2.47016637726506,1.56274011167028,6.14202597803038,3.93933827022176,5.04234217663473,1.76777151284201,3.41692033917847,1.1183966749518,2.65041676666144,1.28471652181535,3.47837386442013,4.30211938490693,3.39985666853875,5.39703191637817,2.59910566979068,4.92829575807069,6.17955448579708,1.53387290320252,1.55871602761721,2.82671659608272,3.66192891419369,3.84979432242953,2.54805239706646,0,2.38140145112336,2.02687892380079,2.52762222507392,4.79572294820052,0.517875767294343,1.33597925158342,1.04091196059682,1.82679286987285,1.61430848079241,2.26083960828934,1.64624189989987,2.76466500925286,1.73036477414062,5.92857363371638,2.65383165584962,2.10296904931632,2.42925670306433,3.39412677194655,3.72783522436244,3.80615036115011,2.30391377494801,3.32094171771169,0,0.599902730993408,0.508280908292259,1.9472783122627,2.28750301409313,2.76439574648302,2.78118912307642,2.30143911597297,2.49345653471472,1.1356888414743,3.1570202793598,1.61729061793121,1.51633655060205,1.68353484709179,2.08192708740326,2.75882525320168,2.52086981727489,2.26057226753573,1.7009124787832,2.94661556655154,4.2165776051878,1.55222022443409,1.29340795759705,0.756424320671277,1.58356011747554,2.84954452155847,0.278047249225598,2.089512999133,0.823128545631774,3.38358253591438,0,0.257347907114715,0,1.03562886267751,0.703578179943289,1.98068267607116,1.89395788468168,1.96764231747404,3.08534225774756,1.39520366850245,2.41446061259657,3.97002164048376,3.62031669809657,4.10418660197738,5.91802309684747,6.43279944671462,4.61055242111206,6.44190810049784,1.89260953707715,2.05809224758569,4.29544417878937,4.49565963328025,1.49301775374664,1.16118335930219,1.54640953586512,1.21010114774006,4.66993892074228,3.23383564391351,6.16887780007865,4.94096864172033,6.03204501120647,5.57078121715222,4.48417400373976,1.79763881730844,3.02593269824572,3.98282546508734,0.948339504765408,1.48523066392647,2.25415471346161,0.814605311381257,2.90928730751439,2.80543279561274,3.47800954183415,4.72352473534727,4.08196692387575,4.19550357334122,3.26097889795864,1.83529616287703,1.37591296579242,1.12431056192427,1.82574109249653,3.37648023653384,2.03700681425136,1.15078454980324,1.62135226775035,2.19649130550465,0,1.86070473834252,3.12037673114561,2.52578877947112,3.04975602987251,2.41221760681684,1.84753190166605,1.32643988239339,1.62964976442026,1.01847051465113,1.64283173801951,2.1775813467436,1.90434912708811,2.73187107000918,1.41871629695572,3.32197034473162,2.23236676120482,3.4411296090305,2.07221978239075,2.89298117163023,0,0,0.983528546038072,0.551873492609465,2.40825884981688,2.69586879162067,0.327869890753351,5.04941854408746,2.83957397474631,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,1.13230612315533,0,2.04579100537918,1.58115111178609,2.24924921495265,1.84522110770749,4.45164009168138,4.72372182125371,2.47455184458803,0,2.91336763385978,0.604647113929502,2.07465587731488,2.36241514304618,2.76691633149535,3.6179961043551,2.18120237686503,2.85197902707777,0.948110273807448,0,4.12542172992747,3.40439605753788,1.98067203434441,2.8458910432206,1.28602221018955,3.72414490648775,3.38900753443934,4.11372551505302,6.39376393140658,1.40803024838226,0.847328283455281,2.20528398054962,2.30840754118072,1.29171541356724,2.0506394475573,2.38744688006273,1.64140899745061,3.20628920292836,2.59595422814714,2.05045056957423,2.06386867963222,0.555583582109135,3.20226376907975,1.91371918809435,1.60144721244566,1.01987057996313,0.69975726161829,0.414599921413271,2.86401185404534,1.10717597753397,1.82987520414164,1.08005340821801,1.04544148007234,1.09181281873089,1.88810084938749,1.90102948168273,3.14107130380836,3.75883422546199,2.4853572523477,1.12738587736838,2.39226473670366,3.64008679005615,1.36115831840833,3.22899558694328,2.36538575687089,3.40335992072686,3.77592716047455,3.35549902162275,3.8653459332161,1.72818003754719,0.632022241256357,1.82452693761148,1.23253148597793,1.29920822977795,0.716106782669926,2.18549490259391,1.44234539423963,1.77227432609493,1.71642964911851,1.905170166375,2.01652370273681,1.26695244961678,2.11666051608725,1.28564592399726,3.40095575422817,1.10992976687032,1.70456327558004,1.34307693091263,2.89784391048286,2.064507229963,1.64836461840539,3.64426244434412,1.50471631210609,1.6942555278512,1.38097570952153,1.14579102687879,3.26521046453006,3.42541259885321,3.0215755895588,1.35004500046361,3.15224842256954,1.35942722695261,2.07104124700728,0.726511433089237,1.19707462020309,1.36586884603307,1.21553358534147,0.209613162627982,2.38996560985018,1.55572709461131,3.5025959730612,1.60459604795908,2.27427490587418,2.02783439912192,2.07488975524684,2.90288673156635,2.94515701062399,3.21638626151434,4.76293691283074,2.54945517078682,3.6652751888104,4.53294490883637,2.64958056241915,1.71434626192708,3.37204031702741,1.90748951957857,2.61623549938191,3.10560955370591,2.876896668317,4.024415403201,2.10455769150274,4.34573164306758,2.80571135828869,3.55905054372522,4.23569274214923,1.22769312950907,3.87342102964915,3.66522560864169,1.74867404556562,3.50897412668113,2.36358159453128,5.54736162999646,3.08827986767322,4.40548887678801
|phase1_expression=1.92178616525753,10.8182376368202,10.0099832665698,6.95667686005709,12.0214975187123,2.68606835059024,2.10251376535973,3.09895976259783,0.281577444303333,0.234064526321993,0.513653904676515,0.398860794976682,3.42401459862411,1.92324885321794,2.6648780945253,2.22722794128809,5.59649502502517,1.41957974411207,0.685572168028694,2.12194825899015,3.57181818634493,0.397163804803541,0.261199789138935,4.7997726838022,7.11168771308227,12.0588712464154,9.90752591165872,5.817723282519,12.9215925230334,15.3738379153558,3.54768817048488,1.90509202037889,3.07532393792285,0,3.17736781726402,4.98703936075477,3.67504841272264,0.418531630736908,2.3440060335714,1.0470474879476,3.52938892818609,2.04913645487534,2.91306211818692,2.39203954153597,2.83855407414641,1.46837401729345,9.38869613217647,6.75877984779384,4.17403747195497,6.9994763666742,3.77963338388479,11.5002051491977,0.838913030288682,1.45072428402269,1.00828139742739,0.514518872071894,1.14613375975503,1.03134418455488,2.02316460859598,3.70293685490423,5.07065122804943,5.42151251310611,11.5608323494448,0.899899717281399,2.96659908770092,3.5524005747305,5.69240209984969,11.1423308543251,2.90330914463737,1.21505344498522,1.47227472945967,4.28476476605705,3.75476519617743,2.81728838194394,4.50473713785711,5.51531271966013,3.30347642998166,3.70293280447044,4.45458946443106,2.50583946687368,2.47016637726506,1.56274011167028,6.14202597803038,3.93933827022176,5.04234217663473,1.76777151284201,3.41692033917847,1.1183966749518,2.65041676666144,1.28471652181535,3.47837386442013,4.30211938490693,3.39985666853875,5.39703191637817,2.59910566979068,4.92829575807069,6.17955448579708,1.53387290320252,1.55871602761721,2.82671659608272,3.66192891419369,3.84979432242953,2.54805239706646,0,2.38140145112336,2.02687892380079,2.52762222507392,4.79572294820052,0.517875767294343,1.33597925158342,1.04091196059682,1.82679286987285,1.61430848079241,2.26083960828934,1.64624189989987,2.76466500925286,1.73036477414062,5.92857363371638,2.65383165584962,2.10296904931632,2.42925670306433,3.39412677194655,3.72783522436244,3.80615036115011,2.30391377494801,3.32094171771169,0,0.599902730993408,0.508280908292259,1.9472783122627,2.28750301409313,2.76439574648302,2.78118912307642,2.30143911597297,2.49345653471472,1.1356888414743,3.1570202793598,1.61729061793121,1.51633655060205,1.68353484709179,2.08192708740326,2.75882525320168,2.52086981727489,2.26057226753573,1.7009124787832,2.94661556655154,4.2165776051878,1.55222022443409,1.29340795759705,0.756424320671277,1.58356011747554,2.84954452155847,0.278047249225598,2.089512999133,0.823128545631774,3.38358253591438,0,0.257347907114715,0,1.03562886267751,0.703578179943289,1.98068267607116,1.89395788468168,1.96764231747404,3.08534225774756,1.39520366850245,2.41446061259657,3.97002164048376,3.62031669809657,4.10418660197738,5.91802309684747,6.43279944671462,4.61055242111206,6.44190810049784,1.89260953707715,2.05809224758569,4.29544417878937,4.49565963328025,1.49301775374664,1.16118335930219,1.54640953586512,1.21010114774006,4.66993892074228,3.23383564391351,6.16887780007865,4.94096864172033,6.03204501120647,5.57078121715222,4.48417400373976,1.79763881730844,3.02593269824572,3.98282546508734,0.948339504765408,1.48523066392647,2.25415471346161,0.814605311381257,2.90928730751439,2.80543279561274,3.47800954183415,4.72352473534727,4.08196692387575,4.19550357334122,3.26097889795864,1.83529616287703,1.37591296579242,1.12431056192427,1.82574109249653,3.37648023653384,2.03700681425136,1.15078454980324,1.62135226775035,2.19649130550465,0,1.86070473834252,3.12037673114561,2.52578877947112,3.04975602987251,2.41221760681684,1.84753190166605,1.32643988239339,1.62964976442026,1.01847051465113,1.64283173801951,2.1775813467436,1.90434912708811,2.73187107000918,1.41871629695572,3.32197034473162,2.23236676120482,3.4411296090305,2.07221978239075,2.89298117163023,0,0,0.983528546038072,0.551873492609465,2.40825884981688,2.69586879162067,0.327869890753351,5.04941854408746,2.83957397474631,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,1.13230612315533,0,2.04579100537918,1.58115111178609,2.24924921495265,1.84522110770749,4.45164009168138,4.72372182125371,2.47455184458803,0,2.91336763385978,0.604647113929502,2.07465587731488,2.36241514304618,2.76691633149535,3.6179961043551,2.18120237686503,2.85197902707777,0.948110273807448,0,4.12542172992747,3.40439605753788,1.98067203434441,2.8458910432206,1.28602221018955,3.72414490648775,3.38900753443934,4.11372551505302,6.39376393140658,1.40803024838226,0.847328283455281,2.20528398054962,2.30840754118072,1.29171541356724,2.0506394475573,2.38744688006273,1.64140899745061,3.20628920292836,2.59595422814714,2.05045056957423,2.06386867963222,0.555583582109135,3.20226376907975,1.91371918809435,1.60144721244566,1.01987057996313,0.69975726161829,0.414599921413271,2.86401185404534,1.10717597753397,1.82987520414164,1.08005340821801,1.04544148007234,1.09181281873089,1.88810084938749,1.90102948168273,3.14107130380836,3.75883422546199,2.4853572523477,1.12738587736838,2.39226473670366,3.64008679005615,1.36115831840833,3.22899558694328,2.36538575687089,3.40335992072686,3.77592716047455,3.35549902162275,3.8653459332161,1.72818003754719,0.632022241256357,1.82452693761148,1.23253148597793,1.29920822977795,0.716106782669926,2.18549490259391,1.44234539423963,1.77227432609493,1.71642964911851,1.905170166375,2.01652370273681,1.26695244961678,2.11666051608725,1.28564592399726,3.40095575422817,1.10992976687032,1.70456327558004,1.34307693091263,2.89784391048286,2.064507229963,1.64836461840539,3.64426244434412,1.50471631210609,1.6942555278512,1.38097570952153,1.14579102687879,3.26521046453006,3.42541259885321,3.0215755895588,1.35004500046361,3.15224842256954,1.35942722695261,2.07104124700728,0.726511433089237,1.19707462020309,1.36586884603307,1.21553358534147,0.209613162627982,2.38996560985018,1.55572709461131,3.5025959730612,1.60459604795908,2.27427490587418,2.02783439912192,2.07488975524684,2.90288673156635,2.94515701062399,3.21638626151434,4.76293691283074,2.54945517078682,3.6652751888104,4.53294490883637,2.64958056241915,1.71434626192708,3.37204031702741,1.90748951957857,2.61623549938191,3.10560955370591,2.876896668317,4.024415403201,2.10455769150274,4.34573164306758,2.80571135828869,3.55905054372522,4.23569274214923,1.22769312950907,3.87342102964915,3.66522560864169,1.74867404556562,3.50897412668113,2.36358159453128,5.54736162999646,3.08827986767322,4.40548887678801
|short_description=p3@Ssr4
|short_description=p3@Ssr4
}}
}}

Revision as of 08:57, 19 April 2012

Short description:p3@Ssr4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ssr4_5end
Coexpression cluster:NA
Association with transcript: -10bp_to_ENSMUST00000166518, NM_001166480, uc009tmr.2, uc009tms.2_5end
EntrezGene:Ssr4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ssr4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I25.82
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C115.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G15.92
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D53.48
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:71032341..71032356,%2B&oldid=1053730"