Personal tools

FFCP PHASE1:Mm9::chr9:108998082..108998114,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000221!2.97e-20!44;CL:0000133!2.97e-20!44;CL:0002319!7.91e-20!43;CL:0000540!1.23e-15!33;CL:0000047!1.23e-15!33;CL:0000031!1.23e-15!33;CL:0000404!1.23e-15!33;CL:0000055!3.65e-15!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39
|ontology_enrichment_celltype=CL:0000221!2.97e-20!44;CL:0000133!2.97e-20!44;CL:0002319!7.91e-20!43;CL:0000540!1.23e-15!33;CL:0000047!1.23e-15!33;CL:0000031!1.23e-15!33;CL:0000404!1.23e-15!33;CL:0000055!3.65e-15!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004121!8.16e-40!102;UBERON:0000924!8.16e-40!102;UBERON:0006601!8.16e-40!102;UBERON:0000073!2.03e-36!75;UBERON:0001016!2.03e-36!75;UBERON:0001017!2.39e-36!73;UBERON:0005743!2.39e-36!73;UBERON:0002346!8.19e-29!71;UBERON:0003075!8.19e-29!71;UBERON:0007284!8.19e-29!71;UBERON:0000033!3.74e-25!63;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0000955!2.14e-23!50;UBERON:0006238!2.14e-23!50;UBERON:0002616!8.14e-23!49;UBERON:0003056!9.33e-20!49;UBERON:0003080!3.99e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002020!1.29e-16!34;UBERON:0002791!8.15e-14!29;UBERON:0003528!8.15e-14!29;UBERON:0001893!8.15e-14!29;UBERON:0000468!1.17e-10!333;UBERON:0007811!3.47e-10!86;UBERON:0000153!5.94e-10!94;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0004111!8.05e-09!122;UBERON:0000025!1.02e-08!114;UBERON:0002619!2.33e-08!17;UBERON:0000922!3.64e-08!328;UBERON:0000479!6.16e-07!349;UBERON:0003076!6.73e-07!12;UBERON:0003057!6.73e-07!12
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0,0.671517087647559,1.86890112476421,0.258246646883153,0.281577444303333,1.40438715793196,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,3.74190476664707,0,0,0.95995453676044,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0,0,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,1.52065396829272,1.28482726513177,1.56478268869608,63.6633456630904,54.0428009526801,55.9958109333936,28.1372707466979,77.6263847570847,0,0,0,1.54355661621568,2.0057340795713,1.03134418455488,18.8154308599426,16.398720357433,15.8457850876545,3.38844532069132,9.78224275722253,0,0,0,44.3408163567239,79.5331892015618,7.77672092313582,9.72042755988173,9.25429829946081,23.9946826899195,18.5529574399355,11.8816075238505,9.68039257284187,11.9498442259303,36.3382407297983,28.2189017168265,30.8749131845049,15.5625819521629,12.4423195299277,18.2319679694866,24.8472869111229,18.0084035210138,26.4340968653881,18.8562294703147,22.3523538854592,12.8615617619457,2.49896437999507,11.5624486963382,4.63783181922684,1.72084775396277,0.679971333707751,0,0,0.448026887097336,1.96622188184453,0,0,0,11.1266301623578,0,0,0,0.865964164044856,2.78695852022608,2.52762222507392,2.05530983494308,0.776813650941515,19.8912466346865,2.4287945747259,6.39377504455497,3.45923245884088,4.52167921657868,5.64425794251383,9.55066094105534,6.67426412882809,2.60278842455841,0,3.558870698843,1.76673214768315,3.39412677194655,1.86391761218122,22.5441213698891,19.8974371472782,0.255457055208591,0,0,0,28.9095934051308,21.9600289352941,10.178002521142,17.3824320192276,18.4115129277838,25.1423533917068,24.3361894601636,2.13862664085664,2.36373244159177,0,2.10441855886474,5.07469727554544,6.20735681970377,7.20248519221397,7.53524089178575,10.1374383735478,11.0177799444971,11.5253121208466,5.69147415625834,3.88022387279116,5.67318240503458,3.69497360744293,2.6303487891309,2.78047249225598,3.83077383174383,2.46938563689532,1.99034266818493,0,0,0,3.31401236056803,1.87620847984877,2.16074473753218,3.55117103377815,1.37734962223183,1.54267112887378,2.32533944750408,1.3413670069981,2.21854150497622,1.81015834904829,1.64167464079095,2.26992666728396,3.21639972335731,1.97595103761946,3.75777972529041,23.5524742391823,13.0688857721691,0,0.528901133327089,2.55945900642281,3.25131340604614,2.57734922644187,2.62188582010345,1.11189021922435,2.66315876557583,0.474529061544512,0.658795818896044,1.25667604400135,1.98956472041151,2.14460495831032,0.898819408654221,1.29682829924817,1.39398891278057,1.89667900953082,3.08470984046268,3.38123207019241,3.05476991767971,3.68509725618489,5.61086559122549,6.5133633237985,3.69025369949005,4.23896565171712,2.71473760627961,0.592905254174298,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,1.20588579876208,1.78238096246994,0.863088412352432,0.162135226775035,1.09824565275233,1.43768206527355,2.60498663367952,2.80833905803104,2.52578877947112,2.15276896226295,1.4473305640901,6.46636165583116,3.22135400009824,2.77040459951444,3.73439188705414,3.05097322775053,3.68513766371995,3.33261097240419,6.63454402716516,5.51723004371669,2.87904096543407,5.10255259703959,7.04612253277673,4.66249451037918,5.93061140184197,0,0,1.47529281905711,1.65562047782839,24.5642402681322,27.0758996027989,0.163934945376675,2.27223834483936,11.042787679569,10.5418460960092,24.5582673415391,6.4521575447189,9.13474563737816,13.0215204162863,9.31064613852257,13.151513606009,11.4633455604492,17.9939937196212,12.2068473279111,3.02711526234334,3.90928702448583,11.5479086080775,2.65490276679926,3.8844901784797,3.32555912661226,3.39489143560617,5.61073596473468,3.3817866273832,3.35956781118687,3.27180356529755,2.49548164869305,2.84433082142234,2.10837217149998,8.25084345985495,14.6389030474129,8.10274923140896,6.98536892426874,8.14480733120051,8.15765074754458,9.63191615051181,7.0756078858912,7.91608867697958,5.16277757740163,9.32061111800809,1.7642271844397,7.09010887648364,2.26050197374268,3.43783672090488,4.77489376012546,6.07321329056727,1.7488850197791,34.1182555699338,0.854354403989263,3.50857675537478,0.740778109478847,0.941842285023455,0.956859594047176,0.228778173206523,0,0,0.138199973804424,3.81868247206045,4.11236791655476,6.91286188231286,5.29226170026826,6.27264888043406,4.58561383866973,6.47348862647139,5.53778153359751,4.71160695571253,1.16653475962614,1.24267862617385,0,5.23307911153926,3.14371131868485,6.22243802700952,3.35815541042101,3.54807863530634,2.46450201156083,2.73429208172295,1.78260885523708,0.966336483304024,0.576060012515731,0.948033361884535,1.01362607645082,1.33524244314275,0.389762468933385,1.07416017400489,1.98681354781265,1.08175904567972,0.738447635872886,1.11063094942962,0.533447646584999,0.100826185136841,0.0974578807397524,0.192423683280659,0.701261413089414,14.7374749349887,0,0,0.167884616364078,2.89784391048286,0.750729901804728,2.19781949120718,3.85863082342319,1.50471631210609,11.8597886949584,8.28585425712918,10.3121192419091,9.79563139359019,8.90607275701835,12.8416962556249,11.4753825039407,10.8077088773813,12.6879874515577,9.83744592328458,2.69847103718859,12.768795948833,5.63420898988643,3.8897074730927,2.30574478890781,2.38996560985018,2.22246727801615,3.91466608753899,2.24643446714271,4.80124702351215,5.83002389747551,3.77252682772152,2.71560371662659,3.71345883948242,3.67587001315925,6.66811167796303,3.94006708212509,2.89363830695558,2.88460130562315,4.56316652416632,3.77156177623957,4.08194354166476,3.09967046931517,4.65108533223451,3.48204707536723,2.79228206042532,3.10977553883713,2.10455769150274,2.8518863907631,5.05028044491965,3.79632057997357,2.46261205938909,4.91077251803627,3.56354734727722,4.62975866354739,6.74488560432454,3.27504251823572,2.36358159453128,3.63447830930802,5.29419405886837,4.17362104116759
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0,0.671517087647559,1.86890112476421,0.258246646883153,0.281577444303333,1.40438715793196,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,3.74190476664707,0,0,0.95995453676044,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0,0,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,1.52065396829272,1.28482726513177,1.56478268869608,63.6633456630904,54.0428009526801,55.9958109333936,28.1372707466979,77.6263847570847,0,0,0,1.54355661621568,2.0057340795713,1.03134418455488,18.8154308599426,16.398720357433,15.8457850876545,3.38844532069132,9.78224275722253,0,0,0,44.3408163567239,79.5331892015618,7.77672092313582,9.72042755988173,9.25429829946081,23.9946826899195,18.5529574399355,11.8816075238505,9.68039257284187,11.9498442259303,36.3382407297983,28.2189017168265,30.8749131845049,15.5625819521629,12.4423195299277,18.2319679694866,24.8472869111229,18.0084035210138,26.4340968653881,18.8562294703147,22.3523538854592,12.8615617619457,2.49896437999507,11.5624486963382,4.63783181922684,1.72084775396277,0.679971333707751,0,0,0.448026887097336,1.96622188184453,0,0,0,11.1266301623578,0,0,0,0.865964164044856,2.78695852022608,2.52762222507392,2.05530983494308,0.776813650941515,19.8912466346865,2.4287945747259,6.39377504455497,3.45923245884088,4.52167921657868,5.64425794251383,9.55066094105534,6.67426412882809,2.60278842455841,0,3.558870698843,1.76673214768315,3.39412677194655,1.86391761218122,22.5441213698891,19.8974371472782,0.255457055208591,0,0,0,28.9095934051308,21.9600289352941,10.178002521142,17.3824320192276,18.4115129277838,25.1423533917068,24.3361894601636,2.13862664085664,2.36373244159177,0,2.10441855886474,5.07469727554544,6.20735681970377,7.20248519221397,7.53524089178575,10.1374383735478,11.0177799444971,11.5253121208466,5.69147415625834,3.88022387279116,5.67318240503458,3.69497360744293,2.6303487891309,2.78047249225598,3.83077383174383,2.46938563689532,1.99034266818493,0,0,0,3.31401236056803,1.87620847984877,2.16074473753218,3.55117103377815,1.37734962223183,1.54267112887378,2.32533944750408,1.3413670069981,2.21854150497622,1.81015834904829,1.64167464079095,2.26992666728396,3.21639972335731,1.97595103761946,3.75777972529041,23.5524742391823,13.0688857721691,0,0.528901133327089,2.55945900642281,3.25131340604614,2.57734922644187,2.62188582010345,1.11189021922435,2.66315876557583,0.474529061544512,0.658795818896044,1.25667604400135,1.98956472041151,2.14460495831032,0.898819408654221,1.29682829924817,1.39398891278057,1.89667900953082,3.08470984046268,3.38123207019241,3.05476991767971,3.68509725618489,5.61086559122549,6.5133633237985,3.69025369949005,4.23896565171712,2.71473760627961,0.592905254174298,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,1.20588579876208,1.78238096246994,0.863088412352432,0.162135226775035,1.09824565275233,1.43768206527355,2.60498663367952,2.80833905803104,2.52578877947112,2.15276896226295,1.4473305640901,6.46636165583116,3.22135400009824,2.77040459951444,3.73439188705414,3.05097322775053,3.68513766371995,3.33261097240419,6.63454402716516,5.51723004371669,2.87904096543407,5.10255259703959,7.04612253277673,4.66249451037918,5.93061140184197,0,0,1.47529281905711,1.65562047782839,24.5642402681322,27.0758996027989,0.163934945376675,2.27223834483936,11.042787679569,10.5418460960092,24.5582673415391,6.4521575447189,9.13474563737816,13.0215204162863,9.31064613852257,13.151513606009,11.4633455604492,17.9939937196212,12.2068473279111,3.02711526234334,3.90928702448583,11.5479086080775,2.65490276679926,3.8844901784797,3.32555912661226,3.39489143560617,5.61073596473468,3.3817866273832,3.35956781118687,3.27180356529755,2.49548164869305,2.84433082142234,2.10837217149998,8.25084345985495,14.6389030474129,8.10274923140896,6.98536892426874,8.14480733120051,8.15765074754458,9.63191615051181,7.0756078858912,7.91608867697958,5.16277757740163,9.32061111800809,1.7642271844397,7.09010887648364,2.26050197374268,3.43783672090488,4.77489376012546,6.07321329056727,1.7488850197791,34.1182555699338,0.854354403989263,3.50857675537478,0.740778109478847,0.941842285023455,0.956859594047176,0.228778173206523,0,0,0.138199973804424,3.81868247206045,4.11236791655476,6.91286188231286,5.29226170026826,6.27264888043406,4.58561383866973,6.47348862647139,5.53778153359751,4.71160695571253,1.16653475962614,1.24267862617385,0,5.23307911153926,3.14371131868485,6.22243802700952,3.35815541042101,3.54807863530634,2.46450201156083,2.73429208172295,1.78260885523708,0.966336483304024,0.576060012515731,0.948033361884535,1.01362607645082,1.33524244314275,0.389762468933385,1.07416017400489,1.98681354781265,1.08175904567972,0.738447635872886,1.11063094942962,0.533447646584999,0.100826185136841,0.0974578807397524,0.192423683280659,0.701261413089414,14.7374749349887,0,0,0.167884616364078,2.89784391048286,0.750729901804728,2.19781949120718,3.85863082342319,1.50471631210609,11.8597886949584,8.28585425712918,10.3121192419091,9.79563139359019,8.90607275701835,12.8416962556249,11.4753825039407,10.8077088773813,12.6879874515577,9.83744592328458,2.69847103718859,12.768795948833,5.63420898988643,3.8897074730927,2.30574478890781,2.38996560985018,2.22246727801615,3.91466608753899,2.24643446714271,4.80124702351215,5.83002389747551,3.77252682772152,2.71560371662659,3.71345883948242,3.67587001315925,6.66811167796303,3.94006708212509,2.89363830695558,2.88460130562315,4.56316652416632,3.77156177623957,4.08194354166476,3.09967046931517,4.65108533223451,3.48204707536723,2.79228206042532,3.10977553883713,2.10455769150274,2.8518863907631,5.05028044491965,3.79632057997357,2.46261205938909,4.91077251803627,3.56354734727722,4.62975866354739,6.74488560432454,3.27504251823572,2.36358159453128,3.63447830930802,5.29419405886837,4.17362104116759
|short_description=p1@Plxnb1
|short_description=p1@Plxnb1
}}
}}

Revision as of 02:27, 20 April 2012

Short description:p1@Plxnb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plxnb1_5end
Coexpression cluster:NA
Association with transcript: 132bp_to_ENSMUST00000072093, NM_172775, uc009rrz.2_5end
EntrezGene:Plxnb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plxnb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C263.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B854.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C356.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C428.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C477.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C844.34
Mouse Microglia, donor2.CNhs12634.11736-123E879.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.86
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F911.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D719.89
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I39.55
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B222.54
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F225.14
diencephalon, neonate N30.CNhs11201.1388-42B224.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C610.14
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G811.53
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E823.55
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G75.61
kidney, neonate N10.CNhs11206.758-6D56.51
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C224.56
medulla oblongata, neonate N30.CNhs11200.1396-42A327.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I712.21
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G611.55
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H33.44
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C934.12
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B414.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:108998082..108998114,%2B&oldid=1154194"