Personal tools

FFCP PHASE1:Mm9::chrX:54646206..54646217,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004177!2.08e-09!29;UBERON:0001004!9.99e-09!42;UBERON:0000065!1.04e-08!41;UBERON:0002370!2.98e-07!23;UBERON:0000974!2.98e-07!23;UBERON:0004807!2.98e-07!23;UBERON:0005058!2.98e-07!23;UBERON:0003351!2.98e-07!23;UBERON:0009113!2.98e-07!23;UBERON:0003295!2.98e-07!23;UBERON:0009722!2.98e-07!23;UBERON:0005562!2.98e-07!23;UBERON:0007690!2.98e-07!23;UBERON:0003408!3.17e-07!24;UBERON:0003081!4.81e-07!88
|phase1_expression=3.20297694209588,3.48975407639361,5.45999087267443,3.32710632437513,4.50806156951712,2.35030980676646,3.97141489012394,13.0414556675992,14.9236045480767,14.0438715793196,9.93064215707929,7.8974437405383,16.0928686135333,16.9595580692855,5.66286595086627,9.31386229993199,2.79824751251259,16.8772258466657,15.0825876966313,11.0341309467488,5.01755411891312,11.2198774857,9.92559198727954,6.39969691173627,5.04700418347774,2.29692785646008,2.58457197695445,3.44753972297422,4.75058548640935,2.77233142735924,4.43461021310609,5.71527606113668,4.92051830067656,0,7.22129049378186,7.14808975041517,7.14592746918292,12.5559489221072,15.626706890476,16.7527598071615,22.9410280332096,13.6609096991689,15.5363312969969,4.78407908307194,2.83855407414641,2.9367480345869,0.782391344348039,2.18025156380447,0.878744730937887,1.94429899074283,3.07970127575798,1.43752564364972,10.5703041816374,6.5282592781021,7.39406358113421,6.68874533693462,5.15760191889762,2.06268836910977,5.05791152148994,5.81890077199236,3.80298842103708,4.40497891689872,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,7.98410014775278,6.34527910158946,6.09942387919008,1.42825492201902,1.98781686856452,5.87955836231779,6.80502844229478,5.51531271966013,7.70811166995721,4.85211884723713,3.5329502648936,5.80299666012853,4.66586982372289,3.12548022334056,5.862842979029,3.37657566019008,4.43114918552749,5.00868595305235,3.41692033917847,4.28718725398191,3.71058347332602,7.55715601067855,6.08715426273523,9.46466264679525,0.679971333707751,2.69851595818909,3.89865850468601,2.68816132258401,5.47733238513832,6.47635225796619,5.71529210126311,6.00677276667578,2.53518155598025,2.56652954828636,0,0,2.16491041011214,2.02687892380079,2.52762222507392,3.9964357901671,21.4918443427153,4.75014845007439,3.99016251562112,3.65358573974569,1.84492397804847,5.42601505989441,4.23319345688537,5.40366342717605,7.41584903203122,9.83275627055399,7.07688441559899,8.41187619726528,7.72945314611377,10.1823803158397,1.86391761218122,13.7606974595427,8.16842156572475,4.85368404896324,9.4653948359677,7.7987355029143,6.86179226194549,5.69204429738326,3.66000482254901,2.76439574648302,4.69325664519146,4.60287823194595,3.94797284663164,4.38051410282946,6.41587992256993,6.84238338355512,5.55990068554084,5.26104639716185,5.59517904739626,9.42598628177239,7.38254732201932,8.43946979880004,7.41597840749474,8.45550553880009,7.77724313845749,7.76110112217047,7.32931175971664,5.8622884852024,5.63043597324636,4.82230611340665,4.17070873838397,6.268538997399,4.32142486456681,6.76716507182877,7.02213187313235,8.74982884190032,8.24074148247219,6.42089894860056,7.27030785941398,8.4629168886677,8.75955521665278,9.83821158737019,10.181629450567,6.27841650826101,7.24338183778972,7.35621656913168,9.70903114489535,6.07419617092652,5.18840381093477,4.67839959761063,7.68425403518677,7.64976586934119,8.20130799400096,5.14523061896422,3.63460661282178,4.49565963328025,7.67837701926842,7.19933682767359,6.82997545007095,5.64713868945359,5.33707305227689,7.60902504450237,6.64340686162316,3.95277491337626,6.78605063760728,5.57078121715222,7.01870713628832,9.88701349519644,5.40345124686736,5.97423819763102,7.58671603812327,6.39791670614481,12.3978509240388,8.5533557695032,8.92181440971078,6.94344616914154,8.85311519739602,8.11855813887812,9.41992367048249,8.39100714668244,4.15033677922008,9.34332592010127,7.27268281918851,9.89393294493356,8.11440485554012,10.1294407096015,11.7127891819453,7.48009957372108,3.72911021582581,5.76578967694971,7.18841032636773,4.46569137202204,6.86482880852033,6.56705082662491,4.30553792452589,3.85954817090694,9.79191907883005,7.39016505904891,9.28900365719548,9.84521497496091,10.3263709246941,11.8929442783689,9.75978927632656,6.82967767502296,9.61574379047765,9.30151696524855,8.29164797018933,9.34020893879707,10.7064688756855,11.4272756279394,6.03165135757089,7.07077388964322,7.37646409528554,9.10591262805617,6.26147300952389,5.62616095642575,3.44263385291018,7.32165688892682,4.10160685241134,2.34263246577983,5.17016154558717,4.06246956519338,2.45078541490634,0.849229592366497,4.85772842009873,2.92255857911312,3.95287777946523,11.8888887076069,6.81312408999689,3.5613120733451,4.88660878060728,8.41347627159931,1.32745138339963,4.37005145078967,6.34879469625977,6.03536255218874,4.13422650033082,6.7635732547664,5.16856586336442,5.08947221268508,6.06045543254026,7.9009189483954,4.21674434299995,11.3449097573006,5.44703369206061,6.12207719706455,4.01011919726539,3.21505552547388,3.90148514013002,2.14042581122485,3.45552943264454,3.65357938937519,12.4376005273766,11.4389318266463,4.6310963591542,5.11147384118588,3.55221738730992,6.45348296731268,4.53614907211919,5.41664969158702,5.53813589596716,5.7481843623258,10.7648654902647,8.2554747185289,9.07453184111587,8.66494902221579,10.2520670790769,10.066239621087,7.13909405974192,8.81694149639045,8.29199842826543,6.68269432610579,6.64305586520384,6.50622294805916,5.07625101862466,6.48173717644853,6.11415178489297,4.18079473792944,5.86839535649885,6.80565449158477,5.05498395837992,6.83473244395618,1.69107881605257,5.53211220362722,5.12921320417003,7.97249872210595,4.26227417476513,5.74450826668646,7.3935060346825,4.9477666240701,3.67007705489988,1.69108884578204,2.30424005006292,16.7485893932934,6.48720688928525,6.67621221571377,12.6023198288461,13.6060288707286,12.3182439964384,12.3801313005568,12.4059202826645,15.8517326418592,11.354814191595,13.4098826231998,16.5678397257579,16.7408604454173,14.7264896748777,4.0811469050738,3.55177525398503,4.66512054369274,5.37230772365051,5.79568782096571,5.06742683718191,6.22715522508701,5.78794623513478,1.50471631210609,3.3885110557024,2.30162618253588,3.43737308063638,3.60891682921744,2.74033007908257,7.55393897389701,4.72515750162264,3.60256962579376,4.07828168085784,4.14208249401456,7.68026372122907,7.98049746802062,5.80494259564056,6.07766792670735,5.8691685535835,5.88299227040045,4.66718128383392,5.97501665992793,5.45562656306086,6.31743029409494,6.59046179714623,6.60192194851267,6.74218853783153,8.38729496503788,7.63891737109657,6.66811167796303,6.60540657885676,5.20854895252004,6.1812885120496,5.2991611248383,7.20025430009372,7.0990322463735,9.0605752179982,6.39524233182245,5.92889096616583,7.53070010235921,6.0366231048015,5.26139422875686,8.01244271690584,8.41713407486608,8.30445126869219,8.37288100192289,7.7753898202241,7.90177890048427,6.17301155139652,4.74640098082097,7.01794825336225,4.94203424311086,4.59091996965224,5.95596831622692,5.10109238364927
|phase1_expression=3.20297694209588,3.48975407639361,5.45999087267443,3.32710632437513,4.50806156951712,2.35030980676646,3.97141489012394,13.0414556675992,14.9236045480767,14.0438715793196,9.93064215707929,7.8974437405383,16.0928686135333,16.9595580692855,5.66286595086627,9.31386229993199,2.79824751251259,16.8772258466657,15.0825876966313,11.0341309467488,5.01755411891312,11.2198774857,9.92559198727954,6.39969691173627,5.04700418347774,2.29692785646008,2.58457197695445,3.44753972297422,4.75058548640935,2.77233142735924,4.43461021310609,5.71527606113668,4.92051830067656,0,7.22129049378186,7.14808975041517,7.14592746918292,12.5559489221072,15.626706890476,16.7527598071615,22.9410280332096,13.6609096991689,15.5363312969969,4.78407908307194,2.83855407414641,2.9367480345869,0.782391344348039,2.18025156380447,0.878744730937887,1.94429899074283,3.07970127575798,1.43752564364972,10.5703041816374,6.5282592781021,7.39406358113421,6.68874533693462,5.15760191889762,2.06268836910977,5.05791152148994,5.81890077199236,3.80298842103708,4.40497891689872,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,7.98410014775278,6.34527910158946,6.09942387919008,1.42825492201902,1.98781686856452,5.87955836231779,6.80502844229478,5.51531271966013,7.70811166995721,4.85211884723713,3.5329502648936,5.80299666012853,4.66586982372289,3.12548022334056,5.862842979029,3.37657566019008,4.43114918552749,5.00868595305235,3.41692033917847,4.28718725398191,3.71058347332602,7.55715601067855,6.08715426273523,9.46466264679525,0.679971333707751,2.69851595818909,3.89865850468601,2.68816132258401,5.47733238513832,6.47635225796619,5.71529210126311,6.00677276667578,2.53518155598025,2.56652954828636,0,0,2.16491041011214,2.02687892380079,2.52762222507392,3.9964357901671,21.4918443427153,4.75014845007439,3.99016251562112,3.65358573974569,1.84492397804847,5.42601505989441,4.23319345688537,5.40366342717605,7.41584903203122,9.83275627055399,7.07688441559899,8.41187619726528,7.72945314611377,10.1823803158397,1.86391761218122,13.7606974595427,8.16842156572475,4.85368404896324,9.4653948359677,7.7987355029143,6.86179226194549,5.69204429738326,3.66000482254901,2.76439574648302,4.69325664519146,4.60287823194595,3.94797284663164,4.38051410282946,6.41587992256993,6.84238338355512,5.55990068554084,5.26104639716185,5.59517904739626,9.42598628177239,7.38254732201932,8.43946979880004,7.41597840749474,8.45550553880009,7.77724313845749,7.76110112217047,7.32931175971664,5.8622884852024,5.63043597324636,4.82230611340665,4.17070873838397,6.268538997399,4.32142486456681,6.76716507182877,7.02213187313235,8.74982884190032,8.24074148247219,6.42089894860056,7.27030785941398,8.4629168886677,8.75955521665278,9.83821158737019,10.181629450567,6.27841650826101,7.24338183778972,7.35621656913168,9.70903114489535,6.07419617092652,5.18840381093477,4.67839959761063,7.68425403518677,7.64976586934119,8.20130799400096,5.14523061896422,3.63460661282178,4.49565963328025,7.67837701926842,7.19933682767359,6.82997545007095,5.64713868945359,5.33707305227689,7.60902504450237,6.64340686162316,3.95277491337626,6.78605063760728,5.57078121715222,7.01870713628832,9.88701349519644,5.40345124686736,5.97423819763102,7.58671603812327,6.39791670614481,12.3978509240388,8.5533557695032,8.92181440971078,6.94344616914154,8.85311519739602,8.11855813887812,9.41992367048249,8.39100714668244,4.15033677922008,9.34332592010127,7.27268281918851,9.89393294493356,8.11440485554012,10.1294407096015,11.7127891819453,7.48009957372108,3.72911021582581,5.76578967694971,7.18841032636773,4.46569137202204,6.86482880852033,6.56705082662491,4.30553792452589,3.85954817090694,9.79191907883005,7.39016505904891,9.28900365719548,9.84521497496091,10.3263709246941,11.8929442783689,9.75978927632656,6.82967767502296,9.61574379047765,9.30151696524855,8.29164797018933,9.34020893879707,10.7064688756855,11.4272756279394,6.03165135757089,7.07077388964322,7.37646409528554,9.10591262805617,6.26147300952389,5.62616095642575,3.44263385291018,7.32165688892682,4.10160685241134,2.34263246577983,5.17016154558717,4.06246956519338,2.45078541490634,0.849229592366497,4.85772842009873,2.92255857911312,3.95287777946523,11.8888887076069,6.81312408999689,3.5613120733451,4.88660878060728,8.41347627159931,1.32745138339963,4.37005145078967,6.34879469625977,6.03536255218874,4.13422650033082,6.7635732547664,5.16856586336442,5.08947221268508,6.06045543254026,7.9009189483954,4.21674434299995,11.3449097573006,5.44703369206061,6.12207719706455,4.01011919726539,3.21505552547388,3.90148514013002,2.14042581122485,3.45552943264454,3.65357938937519,12.4376005273766,11.4389318266463,4.6310963591542,5.11147384118588,3.55221738730992,6.45348296731268,4.53614907211919,5.41664969158702,5.53813589596716,5.7481843623258,10.7648654902647,8.2554747185289,9.07453184111587,8.66494902221579,10.2520670790769,10.066239621087,7.13909405974192,8.81694149639045,8.29199842826543,6.68269432610579,6.64305586520384,6.50622294805916,5.07625101862466,6.48173717644853,6.11415178489297,4.18079473792944,5.86839535649885,6.80565449158477,5.05498395837992,6.83473244395618,1.69107881605257,5.53211220362722,5.12921320417003,7.97249872210595,4.26227417476513,5.74450826668646,7.3935060346825,4.9477666240701,3.67007705489988,1.69108884578204,2.30424005006292,16.7485893932934,6.48720688928525,6.67621221571377,12.6023198288461,13.6060288707286,12.3182439964384,12.3801313005568,12.4059202826645,15.8517326418592,11.354814191595,13.4098826231998,16.5678397257579,16.7408604454173,14.7264896748777,4.0811469050738,3.55177525398503,4.66512054369274,5.37230772365051,5.79568782096571,5.06742683718191,6.22715522508701,5.78794623513478,1.50471631210609,3.3885110557024,2.30162618253588,3.43737308063638,3.60891682921744,2.74033007908257,7.55393897389701,4.72515750162264,3.60256962579376,4.07828168085784,4.14208249401456,7.68026372122907,7.98049746802062,5.80494259564056,6.07766792670735,5.8691685535835,5.88299227040045,4.66718128383392,5.97501665992793,5.45562656306086,6.31743029409494,6.59046179714623,6.60192194851267,6.74218853783153,8.38729496503788,7.63891737109657,6.66811167796303,6.60540657885676,5.20854895252004,6.1812885120496,5.2991611248383,7.20025430009372,7.0990322463735,9.0605752179982,6.39524233182245,5.92889096616583,7.53070010235921,6.0366231048015,5.26139422875686,8.01244271690584,8.41713407486608,8.30445126869219,8.37288100192289,7.7753898202241,7.90177890048427,6.17301155139652,4.74640098082097,7.01794825336225,4.94203424311086,4.59091996965224,5.95596831622692,5.10109238364927
|short_description=p2@Rbmx
|short_description=p2@Rbmx
}}
}}

Revision as of 06:10, 20 April 2012

Short description:p2@Rbmx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rbmx_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000033470, ENSMUST00000098470, ENSMUST00000114726, NM_001166623, NM_011252, NR_029425, uc009thg.2, uc009thh.2, uc009thi.2, uc009thj.2_5end
EntrezGene:Rbmx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rbmx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.09
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F97.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I35.40
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H19.83
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F58.41
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C67.42
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C610.18
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.36
heart, neonate N03.CNhs11221.1349-25I29.71
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G76.94
kidney, neonate N10.CNhs11206.758-6D58.85
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H18.39
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F89.29
lung, embryo E15.CNhs11020.432-17C59.85
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A611.89
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H211.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G68.41
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H36.45
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G210.76
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D18.66
spleen, neonate N20.CNhs11112.824-19H110.25
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G57.97
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I44.95
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I26.68
thymus, embryo E16.CNhs11002.456-26C512.60
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G412.32
thymus, neonate N02.CNhs11181.1541-43F812.38
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C415.85
thymus, neonate N07.CNhs11211.713-19D311.35
thymus, neonate N10.CNhs11194.748-24E413.41
thymus, neonate N20.CNhs11186.820-7A216.57
thymus, neonate N25.CNhs11125.1362-25G716.74
thymus, neonate N30.CNhs11132.1393-42G214.73
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:54646206..54646217,-&oldid=1176856"