Personal tools

DOID:299: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:299 |name=adenocarcinoma |namespace= |def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which orig...")
 
No edit summary
Line 2: Line 2:
|id=DOID:299
|id=DOID:299
|name=adenocarcinoma
|name=adenocarcinoma
|namespace=
|namespace=disease_ontology
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma]
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma]
|xref=
|xref=MSH:D000230;;NCI:C2852;;SNOMEDCT_2010_1_31:189578007;;SNOMEDCT_2010_1_31:189582009;;SNOMEDCT_2010_1_31:35917007;;SNOMEDCT_2010_1_31:443961001;;UMLS_CUI:C0001418
|is_a=DOID:305
|is_a=DOID:305
|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]
|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:00, 11 June 2012

Name:adenocarcinoma
Namespace:disease_ontology
Definition:"A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma]
Xrefs:
links:

MSH:D000230
NCI:C2852
SNOMEDCT_2010_1_31:189578007
SNOMEDCT_2010_1_31:189582009
SNOMEDCT_2010_1_31:35917007
SNOMEDCT_2010_1_31:443961001

UMLS_CUI:C0001418
Synonyms: "adenocarcinoma" EXACT [NCI2004_11_17:C2852]
"adenocarcinoma" EXACT [CSP2005:2000-0386]
"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009]
"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007]
"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:305(carcinoma)



Children


is a:DOID:3030 (mucinous adenocarcinoma),DOID:3111 (cystadenocarcinoma),DOID:3112 (papillary adenocarcinoma),DOID:3493 (signet ring cell adenocarcinoma),DOID:4468 (clear cell adenocarcinoma),DOID:4929 (tubular adenocarcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:299 (adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.16e-42FFCP PHASE2:Hg19::chr3:5740617..5740629,+#_24fe9e22f1590996caf18b5da809cac1p@chr3:5740617..5740629, +
8.16e-42FFCP PHASE1:Hg19::chr3:5740617..5740629,+#_24fe9e22f1590996caf18b5da809cac1p@chr3:5740617..5740629, +
8.61e-42FFCP PHASE1:Hg19::chr3:5741033..5741062,-#_cd0949b1e4c5312b1614e829f44b85bcp@chr3:5741033..5741062, -
8.61e-42FFCP PHASE2:Hg19::chr3:5741033..5741062,-#_cd0949b1e4c5312b1614e829f44b85bcp@chr3:5741033..5741062, -
2.93e-33FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_92fece98367533e9d68bebdc8a2e0f35p@chr6:75178505..75178516, +
2.93e-33FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_92fece98367533e9d68bebdc8a2e0f35p@chr6:75178505..75178516, +
3.43e-33FFCP PHASE1:Hg19::chr4:111532491..111532504,+#_77c1289477423cf21170f3a192cc8761p@chr4:111532491..111532504, +
3.43e-33FFCP PHASE2:Hg19::chr4:111532491..111532504,+#_77c1289477423cf21170f3a192cc8761p@chr4:111532491..111532504, +
2.66e-32FFCP PHASE1:Hg19::chr11:2114486..2114508,-#_ccfaa8c5fda36cb58c001dac71120197p@chr11:2114486..2114508, -
2.66e-32FFCP PHASE2:Hg19::chr11:2114486..2114508,-#_ccfaa8c5fda36cb58c001dac71120197p@chr11:2114486..2114508, -
2.42e-29FFCP PHASE1:Hg19::chr15:33359086..33359124,+#_feb7db58dd76fde384a66fcf6ab5f7c0p@chr15:33359086..33359124, +
2.42e-29FFCP PHASE2:Hg19::chr15:33359086..33359124,+#_feb7db58dd76fde384a66fcf6ab5f7c0p@chr15:33359086..33359124, +
1.35e-28FFCP PHASE2:Hg19::chr7:960521..960533,-#_82a91b2931f960827092189cf0c91fbap15@ADAP1
1.35e-28FFCP PHASE1:Hg19::chr7:960521..960533,-#_82a91b2931f960827092189cf0c91fbap15@ADAP1
1.9e-28FFCP PHASE1:Hg19::chr12:4136920..4136943,+#_0c7ee99fd3bc48f76bb1a291c5766c41p@chr12:4136920..4136943, +
1.9e-28FFCP PHASE2:Hg19::chr12:4136920..4136943,+#_0c7ee99fd3bc48f76bb1a291c5766c41p@chr12:4136920..4136943, +
4.47e-27FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_4471df4b618c55bd43f1d3d837517b07p8@PAX8
4.47e-27FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_4471df4b618c55bd43f1d3d837517b07p8@PAX8
5.75e-26FFCP PHASE1:Hg19::chr6:18497083..18497107,+#_dc716ee4ecc59a3c69ca0c7f13530c98p@chr6:18497083..18497107, +
5.75e-26FFCP PHASE2:Hg19::chr6:18497083..18497107,+#_dc716ee4ecc59a3c69ca0c7f13530c98p@chr6:18497083..18497107, +
6.54e-26FFCP PHASE2:Hg19::chr17:55185128..55185169,+#_316ba123bf83551533f5ce5758d8bcc8p@chr17:55185128..55185169, +
6.54e-26FFCP PHASE1:Hg19::chr17:55185128..55185169,+#_316ba123bf83551533f5ce5758d8bcc8p@chr17:55185128..55185169, +
6.54e-26FFCP PHASE2:Hg19::chr13:37363331..37363344,-#_316ba123bf83551533f5ce5758d8bcc8p@chr13:37363331..37363344, -
6.54e-26FFCP PHASE1:Hg19::chr13:37363331..37363344,-#_316ba123bf83551533f5ce5758d8bcc8p@chr13:37363331..37363344, -
6.59e-26FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_a4a8d31702189c3440d2437a306f3ee0p@chr2:113981834..113981850, -
6.59e-26FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_a4a8d31702189c3440d2437a306f3ee0p@chr2:113981834..113981850, -
6.98e-26FFCP PHASE2:Hg19::chr19:51472686..51472697,-#_68ad9d2d544c204fab291b630638c219p@chr19:51472686..51472697, -
6.98e-26FFCP PHASE1:Hg19::chr19:51472686..51472697,-#_68ad9d2d544c204fab291b630638c219p@chr19:51472686..51472697, -
1.11e-25FFCP PHASE2:Hg19::chr19:51471909..51471917,-#_5677f6916cab9c8fe2587e8f746ff0dbp10@KLK6
1.11e-25FFCP PHASE1:Hg19::chr19:51471909..51471917,-#_5677f6916cab9c8fe2587e8f746ff0dbp10@KLK6
4.73e-25FFCP PHASE2:Hg19::chr7:960507..960519,-#_094c691c45f9e9e6916f89ed47399505p9@ADAP1
4.73e-25FFCP PHASE1:Hg19::chr7:960507..960519,-#_094c691c45f9e9e6916f89ed47399505p9@ADAP1
5.36e-25FFCP PHASE2:Hg19::chr1:206288186..206288203,-#_d69fadf87b34226980b6598c606460a2p1@C1orf186
5.36e-25FFCP PHASE1:Hg19::chr1:206288186..206288203,-#_d69fadf87b34226980b6598c606460a2p1@C1orf186
7.06e-25FFCP PHASE2:Hg19::chr16:2031433..2031447,-#_61469681b1b6a10c485957f49309ef7ep2@NOXO1
7.06e-25FFCP PHASE1:Hg19::chr16:2031433..2031447,-#_61469681b1b6a10c485957f49309ef7ep2@NOXO1
8.15e-25FFCP PHASE1:Hg19::chr1:55352248..55352260,+#_44c39ba981e27fef9e66e85c01540af1p1@ENST00000415336
8.15e-25FFCP PHASE2:Hg19::chr1:55352248..55352260,+#_44c39ba981e27fef9e66e85c01540af1p1@ENST00000415336
1.1e-24FFCP PHASE2:Hg19::chr10:8904309..8904317,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:8904309..8904317, +
1.1e-24FFCP PHASE1:Hg19::chr21:41755024..41755027,+#_941425c9ead95a02a02e2f83ac361f96p2@DSCAM-AS1
1.1e-24FFCP PHASE2:Hg19::chr11:85539944..85539950,+#_941425c9ead95a02a02e2f83ac361f96p@chr11:85539944..85539950, +
1.1e-24FFCP PHASE2:Hg19::chr10:19498568..19498573,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498568..19498573, +
1.1e-24FFCP PHASE1:Hg19::chr9:130913135..130913143,+#_941425c9ead95a02a02e2f83ac361f96p@chr9:130913135..130913143, +
1.1e-24FFCP PHASE1:Hg19::chr19:1753387..1753395,-#_941425c9ead95a02a02e2f83ac361f96p@chr19:1753387..1753395, -
1.1e-24FFCP PHASE2:Hg19::chr6:125589278..125589288,+#_941425c9ead95a02a02e2f83ac361f96p@chr6:125589278..125589288, +
1.1e-24FFCP PHASE2:Hg19::chr21:41711178..41711186,-#_941425c9ead95a02a02e2f83ac361f96p@chr21:41711178..41711186, -
1.1e-24FFCP PHASE2:Hg19::chr10:8910201..8910211,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:8910201..8910211, +
1.1e-24FFCP PHASE2:Hg19::chr10:19498407..19498415,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498407..19498415, +
1.1e-24FFCP PHASE1:Hg19::chr10:19498507..19498511,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498507..19498511, +
1.1e-24FFCP PHASE1:Hg19::chr7:34890932..34890934,+#_941425c9ead95a02a02e2f83ac361f96p@chr7:34890932..34890934, +
1.1e-24FFCP PHASE1:Hg19::chr7:960494..960498,-#_941425c9ead95a02a02e2f83ac361f96p19@ADAP1
1.1e-24FFCP PHASE1:Hg19::chr21:41755185..41755210,+#_941425c9ead95a02a02e2f83ac361f96p1@DSCAM-AS1
1.1e-24FFCP PHASE1:Hg19::chr17:38843592..38843605,+#_941425c9ead95a02a02e2f83ac361f96p@chr17:38843592..38843605, +
1.1e-24FFCP PHASE1:Hg19::chr10:9012128..9012139,+#_941425c9ead95a02a02e2f83ac361f96p2@ENST00000456526
1.1e-24FFCP PHASE1:Hg19::chr16:75511082..75511090,+#_941425c9ead95a02a02e2f83ac361f96p@chr16:75511082..75511090, +
1.1e-24FFCP PHASE2:Hg19::chr9:83986187..83986191,-#_941425c9ead95a02a02e2f83ac361f96p@chr9:83986187..83986191, -
1.1e-24FFCP PHASE2:Hg19::chr7:960422..960430,-#_941425c9ead95a02a02e2f83ac361f96p20@ADAP1
1.1e-24FFCP PHASE1:Hg19::chr10:8904309..8904317,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:8904309..8904317, +
1.1e-24FFCP PHASE1:Hg19::chr9:130913151..130913159,+#_941425c9ead95a02a02e2f83ac361f96p@chr9:130913151..130913159, +
1.1e-24FFCP PHASE2:Hg19::chr21:41755024..41755027,+#_941425c9ead95a02a02e2f83ac361f96p2@DSCAM-AS1
1.1e-24FFCP PHASE2:Hg19::chr10:9012087..9012100,+#_941425c9ead95a02a02e2f83ac361f96p1@ENST00000456526
1.1e-24FFCP PHASE1:Hg19::chr10:19498541..19498551,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498541..19498551, +
1.1e-24FFCP PHASE2:Hg19::chr7:960534..960548,-#_941425c9ead95a02a02e2f83ac361f96p16@ADAP1
1.1e-24FFCP PHASE1:Hg19::chr21:41756567..41756583,-#_941425c9ead95a02a02e2f83ac361f96p@chr21:41756567..41756583, -
1.1e-24FFCP PHASE2:Hg19::chr15:63753284..63753288,+#_941425c9ead95a02a02e2f83ac361f96p@chr15:63753284..63753288, +
1.1e-24FFCP PHASE2:Hg19::chr19:1753387..1753395,-#_941425c9ead95a02a02e2f83ac361f96p@chr19:1753387..1753395, -
1.1e-24FFCP PHASE1:Hg19::chr6:18496965..18496969,+#_941425c9ead95a02a02e2f83ac361f96p@chr6:18496965..18496969, +
1.1e-24FFCP PHASE1:Hg19::chr11:85539944..85539950,+#_941425c9ead95a02a02e2f83ac361f96p@chr11:85539944..85539950, +
1.1e-24FFCP PHASE1:Hg19::chr10:8910201..8910211,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:8910201..8910211, +
1.1e-24FFCP PHASE2:Hg19::chr21:41755185..41755210,+#_941425c9ead95a02a02e2f83ac361f96p1@DSCAM-AS1
1.1e-24FFCP PHASE2:Hg19::chr10:19498507..19498511,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498507..19498511, +
1.1e-24FFCP PHASE1:Hg19::chr10:19498568..19498573,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498568..19498573, +
1.1e-24FFCP PHASE2:Hg19::chr9:130913135..130913143,+#_941425c9ead95a02a02e2f83ac361f96p@chr9:130913135..130913143, +
1.1e-24FFCP PHASE2:Hg19::chr17:38843592..38843605,+#_941425c9ead95a02a02e2f83ac361f96p@chr17:38843592..38843605, +
1.1e-24FFCP PHASE2:Hg19::chr7:34890932..34890934,+#_941425c9ead95a02a02e2f83ac361f96p@chr7:34890932..34890934, +
1.1e-24FFCP PHASE1:Hg19::chr10:19498407..19498415,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498407..19498415, +
1.1e-24FFCP PHASE1:Hg19::chr6:125589278..125589288,+#_941425c9ead95a02a02e2f83ac361f96p@chr6:125589278..125589288, +
1.1e-24FFCP PHASE2:Hg19::chr7:960494..960498,-#_941425c9ead95a02a02e2f83ac361f96p19@ADAP1
1.1e-24FFCP PHASE1:Hg19::chr7:960422..960430,-#_941425c9ead95a02a02e2f83ac361f96p20@ADAP1
1.1e-24FFCP PHASE1:Hg19::chr21:41711178..41711186,-#_941425c9ead95a02a02e2f83ac361f96p@chr21:41711178..41711186, -
1.1e-24FFCP PHASE1:Hg19::chr10:9012087..9012100,+#_941425c9ead95a02a02e2f83ac361f96p1@ENST00000456526
1.1e-24FFCP PHASE1:Hg19::chr15:63753284..63753288,+#_941425c9ead95a02a02e2f83ac361f96p@chr15:63753284..63753288, +
1.1e-24FFCP PHASE2:Hg19::chr21:41756567..41756583,-#_941425c9ead95a02a02e2f83ac361f96p@chr21:41756567..41756583, -
1.1e-24FFCP PHASE2:Hg19::chr10:9012128..9012139,+#_941425c9ead95a02a02e2f83ac361f96p2@ENST00000456526
1.1e-24FFCP PHASE2:Hg19::chr10:19498541..19498551,+#_941425c9ead95a02a02e2f83ac361f96p@chr10:19498541..19498551, +
1.1e-24FFCP PHASE2:Hg19::chr16:75511082..75511090,+#_941425c9ead95a02a02e2f83ac361f96p@chr16:75511082..75511090, +
1.1e-24FFCP PHASE1:Hg19::chr9:83986187..83986191,-#_941425c9ead95a02a02e2f83ac361f96p@chr9:83986187..83986191, -
1.1e-24FFCP PHASE2:Hg19::chr9:130913151..130913159,+#_941425c9ead95a02a02e2f83ac361f96p@chr9:130913151..130913159, +
1.1e-24FFCP PHASE2:Hg19::chr6:18496965..18496969,+#_941425c9ead95a02a02e2f83ac361f96p@chr6:18496965..18496969, +
1.1e-24FFCP PHASE1:Hg19::chr7:960534..960548,-#_941425c9ead95a02a02e2f83ac361f96p16@ADAP1
2.18e-24FFCP PHASE1:Hg19::chr7:47009249..47009265,+#_5fc5536a0085fd0aba43cce1a459f4f1p1@ENST00000445615
2.18e-24FFCP PHASE2:Hg19::chr7:47009249..47009265,+#_5fc5536a0085fd0aba43cce1a459f4f1p1@ENST00000445615
2.5e-23FFCP PHASE2:Hg19::chr20:30307655..30307679,-#_5df5761863ca469870a35b80d7c17fc3p@chr20:30307655..30307679, -
2.5e-23FFCP PHASE1:Hg19::chr20:30307655..30307679,-#_5df5761863ca469870a35b80d7c17fc3p@chr20:30307655..30307679, -
3.53e-23FFCP PHASE1:Hg19::chr1:204347256..204347303,-#_3108d5f25b6f16c4fb738ddff2cef74ep1@ENST00000441225
3.53e-23FFCP PHASE2:Hg19::chr1:204347256..204347303,-#_3108d5f25b6f16c4fb738ddff2cef74ep1@ENST00000441225
5.85e-23FFCP PHASE2:Hg19::chr3:53033328..53033357,-#_7730515163e7acb7cc46928360807b64p@chr3:53033328..53033357, -
5.85e-23FFCP PHASE1:Hg19::chr3:53033328..53033357,-#_7730515163e7acb7cc46928360807b64p@chr3:53033328..53033357, -
6.47e-23FFCP PHASE2:Hg19::chr4:19457034..19457063,+#_40f20f162d5d306b13409841eb2cac91p1@ENST00000511431
6.47e-23FFCP PHASE1:Hg19::chr4:19457034..19457063,+#_40f20f162d5d306b13409841eb2cac91p1@ENST00000511431

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:299&oldid=1832224"