UBERON:0002031: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002031
|name=epithelium of bronchus
|namespace=
|def="An epithelium that is part of a bronchus [Obol]." [OBOL:automatic]
|xref=BTO:0001845;;EFO:00003...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:14, 15 June 2012
| Name: | epithelium of bronchus | ||
|---|---|---|---|
| Definition: | "An epithelium that is part of a bronchus [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"bronchi epithelial tissue" EXACT [OBOL:automatic] "bronchi epithelium" EXACT [OBOL:automatic] "bronchial epithelium" EXACT [] "bronchial trunk epithelial tissue" EXACT [OBOL:automatic] "bronchial trunk epithelium" EXACT [OBOL:automatic] "bronchus epithelial tissue" EXACT [OBOL:automatic] "bronchus epithelium" EXACT [] "epithelial tissue of bronchi" EXACT [OBOL:automatic] "epithelial tissue of bronchial trunk" EXACT [OBOL:automatic] "epithelial tissue of bronchus" EXACT [OBOL:automatic] "epithelium of bronchi" EXACT [OBOL:automatic] "epithelium of bronchial trunk" EXACT [OBOL:automatic] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_67782-MA_0001839 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000485(simple columnar epithelium),UBERON:0004815(lower respiratory tract epithelium) |
|---|---|
| part_of: | UBERON:0002185(bronchus) |
Children
| part of: | CL:0002328 (bronchial epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
- 11457-119A8 (Bronchial Epithelial Cell, donor5)
- 11461-119B3 (Bronchial Epithelial Cell, donor6)
- 11511-119G8 (Bronchial Epithelial Cell, donor1)
- 11591-120G7 (Bronchial Epithelial Cell, donor2)
- 11672-122G7 (Bronchial Epithelial Cell, donor3)
- 11769-123I5 (Bronchial Epithelial Cell, donor7)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002031 (epithelium of bronchus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.71e-84 | FFCP PHASE1:Hg19::chr3:189632708..189632721,-#_3c1c44f62f4b34aef5e352028c6ebcc7 | p@chr3:189632708..189632721, - |
| 1.71e-84 | FFCP PHASE2:Hg19::chr3:189632708..189632721,-#_3c1c44f62f4b34aef5e352028c6ebcc7 | p@chr3:189632708..189632721, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:209823455..209823467,-#_0919ea1f1492b96e595a1c224cd001dc | p@chr1:209823455..209823467, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:209823455..209823467,-#_0919ea1f1492b96e595a1c224cd001dc | p@chr1:209823455..209823467, - |
| 3.13e-50 | FFCP PHASE2:Hg19::chr1:95088552..95088567,+#_b91b526aca2db3246f42f10221615aa0 | p@chr1:95088552..95088567, + |
| 3.13e-50 | FFCP PHASE1:Hg19::chr1:95088552..95088567,+#_b91b526aca2db3246f42f10221615aa0 | p@chr1:95088552..95088567, + |
| 1.03e-46 | FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_8735df81873d64147e4b6af61b09abfd | p@chr1:3591362..3591369, - |
| 1.03e-46 | FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_8735df81873d64147e4b6af61b09abfd | p@chr1:3591362..3591369, - |
| 5.0e-45 | FFCP PHASE1:Hg19::chr2:113830230..113830233,-#_d294976de922f9cf249390b6b214c944 | p@chr2:113830230..113830233, - |
| 5.0e-45 | FFCP PHASE2:Hg19::chr2:113830230..113830233,-#_d294976de922f9cf249390b6b214c944 | p@chr2:113830230..113830233, - |
| 1.92e-43 | FFCP PHASE2:Hg19::chr10:73679250..73679255,-#_5dad6c710b91e902b575433ac16d87a4 | p@chr10:73679250..73679255, - |
| 1.92e-43 | FFCP PHASE1:Hg19::chr10:73679250..73679255,-#_5dad6c710b91e902b575433ac16d87a4 | p@chr10:73679250..73679255, - |
| 7.6e-41 | FFCP PHASE1:Hg19::chr1:9953308..9953320,-#_da8f1f7720ee8f4617d924fe8648a3eb | p9@CTNNBIP1 |
| 7.6e-41 | FFCP PHASE2:Hg19::chr1:9953308..9953320,-#_da8f1f7720ee8f4617d924fe8648a3eb | p9@CTNNBIP1 |
| 1.49e-38 | FFCP PHASE2:Hg19::chr17:48611912..48611919,+#_f65706d030c264a52907edf052f9e992 | p7@EPN3 |
| 1.49e-38 | FFCP PHASE1:Hg19::chr17:48611912..48611919,+#_f65706d030c264a52907edf052f9e992 | p7@EPN3 |
| 1.62e-38 | FFCP PHASE2:Hg19::chr1:95089255..95089279,-#_cacf7209a40d09d8d986b4af2aea3ecd | p1@ENST00000435559 |
| 1.62e-38 | FFCP PHASE1:Hg19::chr1:95089255..95089279,-#_cacf7209a40d09d8d986b4af2aea3ecd | p1@ENST00000435559 |
| 1.8e-38 | FFCP PHASE2:Hg19::chr7:135018332..135018336,+#_0e75c6dece41385f8591613a45551acd | p@chr7:135018332..135018336, + |
| 1.8e-38 | FFCP PHASE1:Hg19::chr7:135018332..135018336,+#_0e75c6dece41385f8591613a45551acd | p@chr7:135018332..135018336, + |
| 3.06e-38 | FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_0ffcc4bc89b7edb99935259f16a04af5 | p5@EPN3 |
| 3.06e-38 | FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_0ffcc4bc89b7edb99935259f16a04af5 | p5@EPN3 |
| 5.76e-38 | FFCP PHASE1:Hg19::chr2:74211227..74211238,+#_939496d229cd832cbb703bf54cbf1d96 | p@chr2:74211227..74211238, + |
| 5.76e-38 | FFCP PHASE2:Hg19::chr2:74211227..74211238,+#_939496d229cd832cbb703bf54cbf1d96 | p@chr2:74211227..74211238, + |
| 2.35e-36 | FFCP PHASE2:Hg19::chr17:38179639..38179652,-#_f91d8b8fe48ceed67337b7f832bfea01 | p7@MED24 |
| 2.35e-36 | FFCP PHASE1:Hg19::chr17:38179639..38179652,-#_f91d8b8fe48ceed67337b7f832bfea01 | p7@MED24 |
| 2.53e-35 | FFCP PHASE1:Hg19::chr20:14248741..14248745,-#_b58921276eb476ff556c8b20fa593505 | p@chr20:14248741..14248745, - |
| 2.53e-35 | FFCP PHASE2:Hg19::chr20:14248741..14248745,-#_b58921276eb476ff556c8b20fa593505 | p@chr20:14248741..14248745, - |
| 1.96e-34 | FFCP PHASE1:Hg19::chr17:38652393..38652403,-#_5a3d39e42150ae9c1d0aed08e806748e | p16@TNS4 |
| 1.96e-34 | FFCP PHASE2:Hg19::chr17:38652393..38652403,-#_5a3d39e42150ae9c1d0aed08e806748e | p16@TNS4 |
| 2.75e-34 | FFCP PHASE1:Hg19::chr1:153540420..153540455,+#_5a03401367e55830a62c543e7409c0f1 | p@chr1:153540420..153540455, + |
| 2.75e-34 | FFCP PHASE2:Hg19::chr1:153540420..153540455,+#_5a03401367e55830a62c543e7409c0f1 | p@chr1:153540420..153540455, + |
| 3.07e-34 | FFCP PHASE2:Hg19::chr12:52844247..52844256,-#_3d422a2138549adcce699a2d835d4a7d | p@chr12:52844247..52844256, - |
| 3.07e-34 | FFCP PHASE1:Hg19::chr12:52844247..52844256,-#_3d422a2138549adcce699a2d835d4a7d | p@chr12:52844247..52844256, - |
| 5.51e-34 | FFCP PHASE1:Hg19::chr11:94427497..94427507,-#_35905ce770dbef1dbf811c6742553ddf | p@chr11:94427497..94427507, - |
| 5.51e-34 | FFCP PHASE2:Hg19::chr11:94427497..94427507,-#_35905ce770dbef1dbf811c6742553ddf | p@chr11:94427497..94427507, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:27181551..27181558,-#_1a07e1901eb95c57613de6ea260a07bd | p@chr1:27181551..27181558, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:27181551..27181558,-#_1a07e1901eb95c57613de6ea260a07bd | p@chr1:27181551..27181558, - |
| 6.76e-34 | FFCP PHASE1:Hg19::chr1:183133608..183133625,-#_f7fc1c5c9658ebe2c6efb86a78f96c5a | p@chr1:183133608..183133625, - |
| 6.76e-34 | FFCP PHASE2:Hg19::chr1:183133608..183133625,-#_f7fc1c5c9658ebe2c6efb86a78f96c5a | p@chr1:183133608..183133625, - |
| 1.27e-33 | FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_0b6bcc10f9a90023287c84b673472974 | p@chr3:190252374..190252383, - |
| 1.27e-33 | FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_0b6bcc10f9a90023287c84b673472974 | p@chr3:190252374..190252383, - |
| 1.5e-33 | FFCP PHASE1:Hg19::chr8:29414184..29414190,+#_59e247b0b8e089414e26a3d99da762b3 | p@chr8:29414184..29414190, + |
| 1.5e-33 | FFCP PHASE2:Hg19::chr8:29414184..29414190,+#_59e247b0b8e089414e26a3d99da762b3 | p@chr8:29414184..29414190, + |
| 6.66e-33 | FFCP PHASE1:Hg19::chr14:67879076..67879080,+#_4e62b5c3847ca9b15a54d9db49f50da1 | p@chr14:67879076..67879080, + |
| 6.66e-33 | FFCP PHASE2:Hg19::chr14:67879076..67879080,+#_4e62b5c3847ca9b15a54d9db49f50da1 | p@chr14:67879076..67879080, + |
| 1.14e-32 | FFCP PHASE1:Hg19::chr1:209807970..209807983,-#_b6c22381624bcab31a685940cbaac995 | p@chr1:209807970..209807983, - |
| 1.14e-32 | FFCP PHASE2:Hg19::chr1:209807970..209807983,-#_b6c22381624bcab31a685940cbaac995 | p@chr1:209807970..209807983, - |
| 2.68e-32 | FFCP PHASE2:Hg19::chr6:83075367..83075383,-#_9decf3ef656df006f519055a8686b211 | p@chr6:83075367..83075383, - |
| 2.68e-32 | FFCP PHASE1:Hg19::chr6:83075367..83075383,-#_9decf3ef656df006f519055a8686b211 | p@chr6:83075367..83075383, - |
| 2.95e-31 | FFCP PHASE1:Hg19::chr4:15937715..15937733,-#_3ab7cb3b6b8b8baabebac2bc355bf655 | p@chr4:15937715..15937733, - |
| 2.95e-31 | FFCP PHASE2:Hg19::chr4:15937715..15937733,-#_3ab7cb3b6b8b8baabebac2bc355bf655 | p@chr4:15937715..15937733, - |
| 6.66e-31 | FFCP PHASE1:Hg19::chr9:26747081..26747110,+#_595b3c0b0cd5582edcb506a7f881e0a5 | p@chr9:26747081..26747110, + |
| 6.66e-31 | FFCP PHASE2:Hg19::chr9:26747081..26747110,+#_595b3c0b0cd5582edcb506a7f881e0a5 | p@chr9:26747081..26747110, + |
| 1.0e-30 | FFCP PHASE2:Hg19::chr11:120008883..120008884,-#_530c888bdf626c0bc5e774094c822120 | p16@TRIM29 |
| 1.0e-30 | FFCP PHASE1:Hg19::chr11:120008883..120008884,-#_530c888bdf626c0bc5e774094c822120 | p16@TRIM29 |
| 1.09e-30 | FFCP PHASE2:Hg19::chr13:61507880..61507904,-#_a450c334f160b1f1ecd8052cc394af5e | p@chr13:61507880..61507904, - |
| 1.09e-30 | FFCP PHASE1:Hg19::chr13:61507880..61507904,-#_a450c334f160b1f1ecd8052cc394af5e | p@chr13:61507880..61507904, - |
| 1.47e-30 | FFCP PHASE1:Hg19::chr1:152475755..152475761,+#_41a9225c2bfbc70c0104c65393282241 | p@chr1:152475755..152475761, + |
| 1.47e-30 | FFCP PHASE2:Hg19::chr1:152475755..152475761,+#_41a9225c2bfbc70c0104c65393282241 | p@chr1:152475755..152475761, + |
| 1.66e-30 | FFCP PHASE1:Hg19::chr17:39777017..39777027,+#_d02bc35d6d84f9410056f0fabb2775c2 | p@chr17:39777017..39777027, + |
| 1.66e-30 | FFCP PHASE2:Hg19::chr17:39777017..39777027,+#_d02bc35d6d84f9410056f0fabb2775c2 | p@chr17:39777017..39777027, + |
| 1.71e-30 | FFCP PHASE2:Hg19::chr4:82554167..82554171,+#_37dedf0d3f8575d42968cdfb4b937bd2 | p@chr4:82554167..82554171, + |
| 1.71e-30 | FFCP PHASE1:Hg19::chr4:82554167..82554171,+#_37dedf0d3f8575d42968cdfb4b937bd2 | p@chr4:82554167..82554171, + |
| 2.24e-30 | FFCP PHASE2:Hg19::chr1:209825932..209825936,-#_611db38e95957832b00ec76d45417cc3 | p10@LAMB3 |
| 2.24e-30 | FFCP PHASE1:Hg19::chr1:209825932..209825936,-#_611db38e95957832b00ec76d45417cc3 | p10@LAMB3 |
| 3.1e-30 | FFCP PHASE2:Hg19::chr15:76443020..76443024,-#_29d11ff1353a64614cf2cd45a3ca25d2 | p@chr15:76443020..76443024, - |
| 3.1e-30 | FFCP PHASE1:Hg19::chr15:76443020..76443024,-#_29d11ff1353a64614cf2cd45a3ca25d2 | p@chr15:76443020..76443024, - |
| 3.11e-30 | FFCP PHASE2:Hg19::chr17:39780624..39780631,-#_af3f370e9b4644c1f00ed1c67645eb7b | p8@KRT17 |
| 3.11e-30 | FFCP PHASE1:Hg19::chr17:39780624..39780631,-#_af3f370e9b4644c1f00ed1c67645eb7b | p8@KRT17 |
| 5.61e-30 | FFCP PHASE1:Hg19::chr1:156720278..156720286,+#_36b3147999d409cff79618cea7a4ade1 | p15@PRCC |
| 5.61e-30 | FFCP PHASE2:Hg19::chr1:156720278..156720286,+#_36b3147999d409cff79618cea7a4ade1 | p15@PRCC |
| 8.74e-30 | FFCP PHASE1:Hg19::chr14:94426721..94426726,+#_c81b5c01094ad1f305ff558da77fd683 | p@chr14:94426721..94426726, + |
| 8.74e-30 | FFCP PHASE2:Hg19::chr14:94426721..94426726,+#_c81b5c01094ad1f305ff558da77fd683 | p@chr14:94426721..94426726, + |
| 1.34e-29 | FFCP PHASE2:Hg19::chr12:52913881..52913889,+#_400ed355de145ba75e94d762146d0aaf | p@chr12:52913881..52913889, + |
| 1.34e-29 | FFCP PHASE1:Hg19::chr12:52913881..52913889,+#_400ed355de145ba75e94d762146d0aaf | p@chr12:52913881..52913889, + |
| 1.63e-29 | FFCP PHASE2:Hg19::chr17:73719483..73719489,-#_9f3807943a5c76a5da4459138fb3793e | p@chr17:73719483..73719489, - |
| 1.63e-29 | FFCP PHASE1:Hg19::chr17:73719483..73719489,-#_9f3807943a5c76a5da4459138fb3793e | p@chr17:73719483..73719489, - |
| 1.98e-29 | FFCP PHASE2:Hg19::chr1:209827520..209827532,-#_90eee597d6b5e9f5c16fdca53702b59f | p@chr1:209827520..209827532, - |
| 1.98e-29 | FFCP PHASE1:Hg19::chr1:209827520..209827532,-#_90eee597d6b5e9f5c16fdca53702b59f | p@chr1:209827520..209827532, - |
| 2.64e-29 | FFCP PHASE2:Hg19::chr12:56332022..56332030,+#_be704b903700a36d1842e6b961484ea6 | p17@DGKA |
| 2.64e-29 | FFCP PHASE1:Hg19::chr12:56332022..56332030,+#_be704b903700a36d1842e6b961484ea6 | p17@DGKA |
| 3.27e-28 | FFCP PHASE2:Hg19::chr17:38657781..38657786,-#_c6f809e1ae5b2073f5b5fd6b1673b86f | p15@TNS4 |
| 3.27e-28 | FFCP PHASE1:Hg19::chr17:38657781..38657786,-#_c6f809e1ae5b2073f5b5fd6b1673b86f | p15@TNS4 |
| 4.32e-28 | FFCP PHASE2:Hg19::chr1:55436540..55436544,-#_a5136886f22974ac67fb896121997e0a | p@chr1:55436540..55436544, - |
| 4.32e-28 | FFCP PHASE1:Hg19::chr1:55436540..55436544,-#_a5136886f22974ac67fb896121997e0a | p@chr1:55436540..55436544, - |
| 6.24e-28 | FFCP PHASE1:Hg19::chr1:153534013..153534025,+#_cdc146323f64f711679d7fd1b100e415 | p@chr1:153534013..153534025, + |
| 6.24e-28 | FFCP PHASE2:Hg19::chr1:153534013..153534025,+#_cdc146323f64f711679d7fd1b100e415 | p@chr1:153534013..153534025, + |
| 8.22e-28 | FFCP PHASE1:Hg19::chr17:39768786..39768828,-#_66c80e3b7d67d95a18f97f6c55e274ff | p2@KRT16 |
| 8.22e-28 | FFCP PHASE2:Hg19::chr17:39768786..39768828,-#_66c80e3b7d67d95a18f97f6c55e274ff | p2@KRT16 |
| 1.22e-27 | FFCP PHASE1:Hg19::chr2:70581573..70581577,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr2:70581573..70581577, - |
| 1.22e-27 | FFCP PHASE2:Hg19::chr2:70581573..70581577,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr2:70581573..70581577, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr1:153587360..153587377,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr1:153587360..153587377, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr1:44446555..44446566,+#_3617cebe9170469d2d52f6215f4c8dd0 | p16@B4GALT2 |
| 1.22e-27 | FFCP PHASE1:Hg19::chr19:48101913..48101916,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr19:48101913..48101916, - |
| 1.22e-27 | FFCP PHASE2:Hg19::chr1:153587360..153587377,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr1:153587360..153587377, - |
| 1.22e-27 | FFCP PHASE2:Hg19::chr1:44446555..44446566,+#_3617cebe9170469d2d52f6215f4c8dd0 | p16@B4GALT2 |
| 1.22e-27 | FFCP PHASE2:Hg19::chr19:48101913..48101916,-#_3617cebe9170469d2d52f6215f4c8dd0 | p@chr19:48101913..48101916, - |
| 1.39e-27 | FFCP PHASE2:Hg19::chr1:46647115..46647118,-#_9c2bacd69f9194918789c6a75f687625 | p@chr1:46647115..46647118, - |
| 1.39e-27 | FFCP PHASE1:Hg19::chr2:20402306..20402318,-#_9c2bacd69f9194918789c6a75f687625 | p@chr2:20402306..20402318, - |
