UBERON:0003928: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003928
|name=digestive system duct
|namespace=
|def="A duct that is part of a digestive system [Obol]." [OBOL:automatic]
|xref=ZFA:0005162
|is_a=UBE...") |
No edit summary |
||
Line 21: | Line 21: | ||
|part_of=UBERON:0001007 | |part_of=UBERON:0001007 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:19, 15 June 2012
Name: | digestive system duct | ||
---|---|---|---|
Definition: | "A duct that is part of a digestive system [Obol]." [OBOL:automatic] | ||
Xrefs: |
| ||
Synonyms: |
"duct of digestive system" EXACT [OBOL:automatic] "duct of gastrointestinal system" EXACT [OBOL:automatic] "gastrointestinal system duct" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000058(duct) |
---|---|
part_of: | UBERON:0001007(digestive system) |
Children
is a: | UBERON:0002394 (bile duct),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0007329 (pancreatic duct) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10496-107C1 (bile duct carcinoma cell line:TFK-1)
- 10533-107G2
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10542-107H2
- 10627-108H6
- 10629-108H8
- 10630-108H9
- 11522-119I1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003928 (digestive system duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:15678147..15678149, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:109223756..109223764, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:75375903..75375931, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:109031260..109031268, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35945332..35945335, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35106749..35106752, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:25530071..25530072, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:100890388..100890423, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:141645056..141645068, + |
3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:116223548..116223551, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chrX:166418658..166418683, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35094068..35094092, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:86691530..86691535, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:129180613..129180616, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:60398371..60398393, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35093377..35093381, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:85288471..85288502, + |
3.07e-86 | FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:32912678..32912687, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:87046930..87046933, + |
3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:85547242..85547252, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:141645056..141645068, + |
3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr3:90270007..90270012, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:132405466..132405470, + |
3.07e-86 | FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr14:101778294..101778296, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:97402708..97402712, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:163794592..163794593, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:117101788..117101793, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113550715..113550722, - |
3.07e-86 | FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:169549462..169549477, + |
3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:87046930..87046933, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:114250006..114250039, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:57687477..57687488, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:85587155..85587188, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:138241693..138241697, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:82193340..82193343, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:93895817..93895819, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35106749..35106752, - |
3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:100000226..100000230, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:186559285..186559288, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:138241693..138241697, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:43407825..43407830, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:62009160..62009164, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:38831400..38831402, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:85587155..85587188, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:84756280..84756286, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:34798597..34798606, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:25364645..25364655, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:169549462..169549477, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:34549876..34549892, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:88237840..88237851, - |
3.07e-86 | FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr19:29573929..29573932, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:129407463..129407468, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:88669906..88669914, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:117829935..117829959, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:59435855..59435878, - |
3.07e-86 | FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:30944451..30944485, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:76329688..76329692, - |
3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:34549876..34549892, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113554186..113554192, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:89310639..89310641, - |
3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:111108947..111108951, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:44793802..44793835, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:92938260..92938264, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:65159026..65159034, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:86691575..86691580, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:88890706..88890745, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:39513150..39513152, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:48822294..48822295, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:28107053..28107062, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:33088768..33088773, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:186559285..186559288, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:85585949..85585969, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:8471698..8471701, + |
3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p6@Adamts1 |
3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:84756280..84756286, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:43407825..43407830, + |
3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:133323630..133323631, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:173044327..173044331, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:66883923..66883955, - |
3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr14:8928284..8928331, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:48398664..48398684, - |
3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:118287827..118287833, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:86335502..86335509, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:47491114..47491123, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:68437375..68437378, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p8@Map3k8 |
3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:35881716..35881727, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:82207617..82207621, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:93942324..93942342, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113542610..113542614, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:32178407..32178408, - |