UBERON:0009145: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0009145
|name=pharyngeal region
|namespace=
|def=
|xref=EMAPA:16549;;RETIRED_EHDAA2:0001454
|is_a=UBERON:0005423
|synonym=
|comment=
|alt_id=
|di...") |
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|part_of=UBERON:0001041;;UBERON:0001557 | |part_of=UBERON:0001041;;UBERON:0001557 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:26, 15 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0001041(foregut),UBERON:0001557(upper respiratory tract) |
Children
| develops from: | UBERON:0001042 (chordate pharynx) |
|---|---|
| part of: | UBERON:0008814 (pharyngeal arch system) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009145 (pharyngeal region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.66e-65 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_21124ac0d35277f0d86f05eb23a2ce9a | p4@uc009bpa.1 |
| 1.66e-65 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_21124ac0d35277f0d86f05eb23a2ce9a | p4@uc009bpa.1 |
| 1.86e-64 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_dbdaabc8d2da325fcd49b6a0e8b6a69a | p8@uc009bpa.1 |
| 1.86e-64 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_dbdaabc8d2da325fcd49b6a0e8b6a69a | p8@uc009bpa.1 |
| 8.23e-63 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_f10a0d777b66dcd2ea501422c959de8e | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 8.23e-63 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_f10a0d777b66dcd2ea501422c959de8e | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 1.32e-61 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_05c7dd091c1587dfad45d01372545f4b | p@chr6:41491752..41491776, - |
| 1.32e-61 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_05c7dd091c1587dfad45d01372545f4b | p@chr6:41491752..41491776, - |
| 1.32e-61 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_05c7dd091c1587dfad45d01372545f4b | p@chr12:108361918..108361930, - |
| 1.32e-61 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_05c7dd091c1587dfad45d01372545f4b | p@chr12:108361918..108361930, - |
| 2.27e-60 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_3b6f9760749a959c56c872c039c7a211 | p2@ENSMUST00000103283 |
| 2.27e-60 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_3b6f9760749a959c56c872c039c7a211 | p2@ENSMUST00000103283 |
| 2.83e-60 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_5f27a3a939d3a7b82d9cf45b4b5eed6f | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 2.83e-60 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_5f27a3a939d3a7b82d9cf45b4b5eed6f | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_fe347199c3c0887e3819cebb6d57967e | p19@AMOTL1 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:42749543..42749555,+#_fe347199c3c0887e3819cebb6d57967e | p@chr21:42749543..42749555, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:22928012..22928031,+#_fe347199c3c0887e3819cebb6d57967e | p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_fe347199c3c0887e3819cebb6d57967e | p19@AMOTL1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:42749543..42749555,+#_fe347199c3c0887e3819cebb6d57967e | p@chr21:42749543..42749555, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_fe347199c3c0887e3819cebb6d57967e | p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1 |
| 3.96e-59 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_55fa8b5f4d1340fb8ffb092748e508cf | p@chr9:44807434..44807445, - |
| 3.96e-59 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_55fa8b5f4d1340fb8ffb092748e508cf | p@chr9:44807434..44807445, - |
| 4.91e-59 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_a50b642b06817d1ac63821d5d0595421 | p@chr6:41494001..41494028, + |
| 4.91e-59 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_a50b642b06817d1ac63821d5d0595421 | p@chr6:41494001..41494028, + |
| 1.18e-58 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_8321c6019172f8568282158020217ec1 | p@chr9:44809185..44809215, - |
| 1.18e-58 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_8321c6019172f8568282158020217ec1 | p@chr9:44809185..44809215, - |
| 1.22e-58 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_95627a763927ce1fdc147f1029b49ac0 | p11@Prkcq |
| 1.22e-58 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_95627a763927ce1fdc147f1029b49ac0 | p11@Prkcq |
| 3.55e-58 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_b72f8a9b4506f2a59688ee5f4dee5932 | p@chr14:54791784..54791787, + |
| 3.55e-58 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_b72f8a9b4506f2a59688ee5f4dee5932 | p@chr14:54791784..54791787, + |
| 6.17e-58 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_18553d2eca65f1b6735969a237cbef72 | p1@ENSMUST00000103263 |
| 6.17e-58 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_18553d2eca65f1b6735969a237cbef72 | p1@ENSMUST00000103263 |
| 1.17e-57 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_972f727febd99387ab069e8e62c311c4 | p5@Themis |
| 1.17e-57 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_972f727febd99387ab069e8e62c311c4 | p5@Themis |
| 1.36e-57 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_eef4a774b11ea4c58d6c986a77cf34e5 | p5@uc009bpa.1 |
| 1.36e-57 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_eef4a774b11ea4c58d6c986a77cf34e5 | p5@uc009bpa.1 |
| 1.46e-57 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_0e52dd0fdcbba76085d4293d9c6c4660 | p@chr9:44793518..44793537, + |
| 1.46e-57 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_0e52dd0fdcbba76085d4293d9c6c4660 | p@chr9:44793518..44793537, + |
| 1.87e-57 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_fb9f7b9adafd101dcb02c13e11d62ba5 | p@chr6:41071548..41071565, + |
| 1.87e-57 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_fb9f7b9adafd101dcb02c13e11d62ba5 | p@chr6:41071548..41071565, + |
| 3.74e-57 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_f70facb9cbd20d29eb4df9aa810d771f | p2@uc009bnp.1, p2@uc012eki.1 |
| 3.74e-57 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_f70facb9cbd20d29eb4df9aa810d771f | p2@uc009bnp.1, p2@uc012eki.1 |
| 2.11e-56 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_8a26f9b89df45efb49ced21f0fe8f162 | p5@Tcf7 |
| 2.11e-56 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_8a26f9b89df45efb49ced21f0fe8f162 | p5@Tcf7 |
| 7.76e-56 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_a192d31fece8152099bad9bc84ec050c | p@chr14:61328148..61328173, + |
| 7.76e-56 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_a192d31fece8152099bad9bc84ec050c | p@chr14:61328148..61328173, + |
| 1.22e-55 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_ee1be14184feb0823ba559326f2c46e4 | p2@uc009bpa.1 |
| 1.22e-55 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_ee1be14184feb0823ba559326f2c46e4 | p2@uc009bpa.1 |
| 1.4e-55 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_cde2865b24e7d972a4019dafc3450d11 | p2@Sh2d1a |
| 1.4e-55 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_cde2865b24e7d972a4019dafc3450d11 | p2@Sh2d1a |
| 2.37e-55 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_24961fa41ad6ff4d4cedad3516bfed5d | p1@uc012ekr.1 |
| 2.37e-55 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_24961fa41ad6ff4d4cedad3516bfed5d | p1@uc012ekr.1 |
| 2.97e-55 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_095712219625b10180c37a5279b38229 | p2@1810009J06Rik |
| 2.97e-55 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_095712219625b10180c37a5279b38229 | p2@1810009J06Rik |
| 4.31e-55 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_341413123021c0031b6d05d27b5beaed | p1@uc012ekk.1 |
| 4.31e-55 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_341413123021c0031b6d05d27b5beaed | p1@uc012ekk.1 |
| 5.01e-55 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_b083c691ac4dd24c0c0c6e98ba104fad | p1@ENSMUST00000103265 |
| 5.01e-55 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_b083c691ac4dd24c0c0c6e98ba104fad | p1@ENSMUST00000103265 |
| 5.01e-55 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_b083c691ac4dd24c0c0c6e98ba104fad | p3@uc009bpo.1, p3@uc009bpp.1 |
| 5.01e-55 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_b083c691ac4dd24c0c0c6e98ba104fad | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.07e-54 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_f6e700a311e73729ad91b60864bbb381 | p@chr7:133512043..133512060, - |
| 1.07e-54 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_f6e700a311e73729ad91b60864bbb381 | p@chr7:133512043..133512060, - |
| 1.32e-54 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_db0d3bedfe878ae48a90505f2cab0864 | p2@Gm5409 |
| 1.32e-54 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_db0d3bedfe878ae48a90505f2cab0864 | p2@Gm5409 |
| 2.0e-54 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_985f9c358a2230e9718916d8b2e906e9 | p5@Trat1 |
| 2.0e-54 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_985f9c358a2230e9718916d8b2e906e9 | p5@Trat1 |
| 2.2e-54 | FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_6253be97ddb6201989609bc86a89cee8 | p4@Trat1 |
| 2.2e-54 | FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_6253be97ddb6201989609bc86a89cee8 | p4@Trat1 |
| 2.23e-54 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_b73db6e6c146ef1bae09563959b79e08 | p@chr6:41489240..41489252, + |
| 2.23e-54 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_b73db6e6c146ef1bae09563959b79e08 | p@chr6:41489240..41489252, + |
| 4.16e-54 | FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_20d7984427adc6d992d32269dd43bc9d | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 4.16e-54 | FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_20d7984427adc6d992d32269dd43bc9d | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 4.37e-54 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_8ef3e4f512ef997ed389cc4ef137c025 | p1@ENSMUST00000103282 |
| 4.37e-54 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_8ef3e4f512ef997ed389cc4ef137c025 | p1@ENSMUST00000103282 |
| 4.37e-54 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_8ef3e4f512ef997ed389cc4ef137c025 | p@chr6:41494376..41494389, - |
| 4.37e-54 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_8ef3e4f512ef997ed389cc4ef137c025 | p@chr6:41494376..41494389, - |
| 5.42e-54 | FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_b369fd7d52f6957eb2dd6b4d1bf701b0 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 5.42e-54 | FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_b369fd7d52f6957eb2dd6b4d1bf701b0 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 5.43e-54 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_4e59350ef053691f733bafb92f0dba9a | p@chr14:54794540..54794554, + |
| 5.43e-54 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_4e59350ef053691f733bafb92f0dba9a | p@chr14:54794540..54794554, + |
| 5.9e-54 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_224bbdf91ef3fbf015e182bc5474869c | p@chr6:41491801..41491815, - |
| 5.9e-54 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_224bbdf91ef3fbf015e182bc5474869c | p@chr14:54496363..54496388, + |
| 5.9e-54 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_224bbdf91ef3fbf015e182bc5474869c | p@chr14:54496363..54496388, + |
| 5.9e-54 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_224bbdf91ef3fbf015e182bc5474869c | p@chr6:41491801..41491815, - |
| 6.18e-54 | FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_f3e6d699e49760108c973762b5cf703c | p@chr6:41492643..41492662, + |
| 6.18e-54 | FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_f3e6d699e49760108c973762b5cf703c | p@chr6:41492643..41492662, + |
| 6.96e-54 | FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_fb0968a4e846af71822acd95d149ea50 | p1@Il13 |
| 6.96e-54 | FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_fb0968a4e846af71822acd95d149ea50 | p1@Il13 |
| 7.53e-54 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_56eff43cebf22b8faaee8b45d098d432 | p@chr6:41492605..41492621, + |
| 7.53e-54 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_56eff43cebf22b8faaee8b45d098d432 | p@chr6:41492605..41492621, + |
| 7.54e-54 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_facf50d6d60a3b50e6eb1144c515aecf | p7@Lat |
| 7.54e-54 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_facf50d6d60a3b50e6eb1144c515aecf | p7@Lat |
| 8.18e-54 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_fadcfe320c7e2a60035dc6d7a49f4400 | p@chr6:41138311..41138333, + |
| 8.18e-54 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_fadcfe320c7e2a60035dc6d7a49f4400 | p@chr6:41138311..41138333, + |
| 1.05e-53 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_12390c3b2fdfbee7608e55fd414ab7e5 | p5@uc009bnp.1, p5@uc012eki.1 |
| 1.05e-53 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_12390c3b2fdfbee7608e55fd414ab7e5 | p5@uc009bnp.1, p5@uc012eki.1 |
| 1.16e-53 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_26d4f2e2fbddc9a9299ba3548cc7f0c6 | p@chr4:125978325..125978339, - |
| 1.16e-53 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_26d4f2e2fbddc9a9299ba3548cc7f0c6 | p6@uc009bpa.1 |
| 1.16e-53 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_26d4f2e2fbddc9a9299ba3548cc7f0c6 | p8@Lat |
| 1.16e-53 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_26d4f2e2fbddc9a9299ba3548cc7f0c6 | p6@uc009bpa.1 |
