CL:0000355: Difference between revisions
From FANTOM5_SSTAR
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|def="A multifate stem cell found in skeletal muscle than can differentiate into many different cell types. Dist...") |
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Revision as of 17:37, 15 June 2012
| Name: | muscle stem cell | |
|---|---|---|
| Namespace: | cell | |
| Definition: | "A multifate stem cell found in skeletal muscle than can differentiate into many different cell types. Distinct cell type from satellite cell." [PMID:18282570] | |
| Xrefs: |
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Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000048(multi fate stem cell) |
|---|---|
| part_of: | UBERON:0001134(skeletal muscle tissue) |
Children
| derives from: | FF:0000267 (mouse muscle derived stem cell sample) |
|---|---|
| develops from: | CL:0000056 (myoblast),CL:0000515 (skeletal muscle myoblast) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12159-128G8 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL))
- 12161-128H1 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL))
- 12163-128H3 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL))
Mouse (Mus musculus)
- 12159-128G8 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL))
- 12161-128H1 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL))
- 12163-128H3 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000355 (muscle stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
