UBERON:0000167: Difference between revisions
From FANTOM5_SSTAR
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;; | |xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA2:0001324;;EHDAA:6970;;EMAPA:17411;;EV:0100057;;FMA:20292;;HAO:0000669;;ncithesaurus:Oral_Cavity;;SCTID:181220002;;TAO:0001027;;TGMA:0000102;;VHOG:0000188;;WBbt:0005255;;XAO:0000126;;ZFA:0001027 | ||
|is_a=UBERON:0002553 | |is_a=UBERON:0002553 | ||
|synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | |synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim;;vertebrate_core | |subset=uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 16:56, 26 June 2012
| Name: | oral cavity | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"buccal cavity" EXACT [FMA:20292] "cavity of mouth" EXACT [] | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002553(anatomical cavity) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000167 (oral cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760737..31760740,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760737..31760740, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:10412881..10412883,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:10412881..10412883, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31763312..31763323,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763312..31763323, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028629..71028648,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028629..71028648, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:66624229..66624234,+#_d0c61eebbf6b0409239e45fca343f024 | p4@AL117652 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11033624..11033630,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033624..11033630, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70861849..70861868,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70861849..70861868, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:55224381..55224392,+#_d0c61eebbf6b0409239e45fca343f024 | p7@MUCL1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_d0c61eebbf6b0409239e45fca343f024 | p1@ENST00000507298 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70921269..70921289,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70921269..70921289, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71020077..71020092,+#_d0c61eebbf6b0409239e45fca343f024 | p5@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255494..71255501,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255494..71255501, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70858987..70858995,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70858987..70858995, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255909..71255918,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255909..71255918, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009379..9009420,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009379..9009420, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11037034..11037039,-#_d0c61eebbf6b0409239e45fca343f024 | p4@PRH1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:127800673..127800677,+#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:127800673..127800677, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70898918..70898937,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70898918..70898937, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:142133987..142133994,-#_d0c61eebbf6b0409239e45fca343f024 | p15@RNF150 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31749597..31749606,+#_d0c61eebbf6b0409239e45fca343f024 | p10@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31760848..31760853,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760848..31760853, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31763312..31763323,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763312..31763323, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255683..71255689,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255683..71255689, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:66624229..66624234,+#_d0c61eebbf6b0409239e45fca343f024 | p4@AL117652 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11033561..11033572,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033561..11033572, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70861849..70861868,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70861849..70861868, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:104159271..104159273,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:104159271..104159273, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:80849228..80849258,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr17:80849228..80849258, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31756965..31756990,+#_d0c61eebbf6b0409239e45fca343f024 | p4@BPIFA2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:55224189..55224198,+#_d0c61eebbf6b0409239e45fca343f024 | p9@MUCL1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_d0c61eebbf6b0409239e45fca343f024 | p1@ENST00000507298 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70921269..70921289,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70921269..70921289, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71024344..71024359,+#_d0c61eebbf6b0409239e45fca343f024 | p6@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760848..31760853,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760848..31760853, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31767403..31767414,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31767403..31767414, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr9:81404652..81404653,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr9:81404652..81404653, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70866637..70866642,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70866637..70866642, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255909..71255918,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255909..71255918, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009379..9009420,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009379..9009420, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9027751..9027755,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9027751..9027755, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:73108040..73108043,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr16:73108040..73108043, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chrX:127800673..127800677,+#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:127800673..127800677, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70898918..70898937,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70898918..70898937, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:142133987..142133994,-#_d0c61eebbf6b0409239e45fca343f024 | p15@RNF150 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71024344..71024359,+#_d0c61eebbf6b0409239e45fca343f024 | p6@C4orf40 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:33651567..33651572,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:33651567..33651572, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70858987..70858995,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70858987..70858995, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255683..71255689,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255683..71255689, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:94247088..94247093,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:94247088..94247093, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009469..9009476,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009469..9009476, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:80849228..80849258,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr17:80849228..80849258, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31756965..31756990,+#_d0c61eebbf6b0409239e45fca343f024 | p4@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31763221..31763230,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763221..31763230, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71028660..71028668,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028660..71028668, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:21489085..21489115,-#_d0c61eebbf6b0409239e45fca343f024 | p62@NDRG2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31767403..31767414,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31767403..31767414, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:10569527..10569554,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr3:10569527..10569554, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255816..71255827,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255816..71255827, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009322..9009333,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009322..9009333, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:104159271..104159273,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:104159271..104159273, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11035682..11035705,-#_d0c61eebbf6b0409239e45fca343f024 | p4@PRR4 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11085389..11085397,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11085389..11085397, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr9:81404652..81404653,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr9:81404652..81404653, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70866637..70866642,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70866637..70866642, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70894345..70894354,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70894345..70894354, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:49942089..49942094,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942089..49942094, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9027751..9027755,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9027751..9027755, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31760756..31760778,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760756..31760778, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:73108040..73108043,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr16:73108040..73108043, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31763221..31763230,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763221..31763230, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:33651567..33651572,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:33651567..33651572, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:94247088..94247093,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:94247088..94247093, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:99243504..99243506,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:99243504..99243506, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009469..9009476,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009469..9009476, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:53171146..53171174,-#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:53171146..53171174, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760756..31760778,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760756..31760778, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31763318..31763328,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763318..31763328, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:68527632..68527634,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:68527632..68527634, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028660..71028668,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028660..71028668, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:66624238..66624249,+#_d0c61eebbf6b0409239e45fca343f024 | p1@AL117652 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11035201..11035242,-#_d0c61eebbf6b0409239e45fca343f024 | p6@PRR4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:10569527..10569554,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr3:10569527..10569554, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255816..71255827,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255816..71255827, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009322..9009333,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009322..9009333, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70894345..70894354,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70894345..70894354, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70924295..70924307,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924295..70924307, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chrX:53171146..53171174,-#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:53171146..53171174, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71029698..71029719,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71029698..71029719, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:12466842..12466843,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr10:12466842..12466843, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70859008..70859019,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859008..70859019, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009400..9009412,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009400..9009412, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11037049..11037056,-#_d0c61eebbf6b0409239e45fca343f024 | p5@PRH1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:129565220..129565223,+#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:129565220..129565223, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:99243504..99243506,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:99243504..99243506, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31761883..31761894,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761883..31761894, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71024386..71024397,+#_d0c61eebbf6b0409239e45fca343f024 | p8@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31763318..31763328,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763318..31763328, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:66624238..66624249,+#_d0c61eebbf6b0409239e45fca343f024 | p1@AL117652 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11033611..11033616,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033611..11033616, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:25004699..25004706, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
