UBERON:0002073: Difference between revisions
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|def="a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle] | |def="a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle] | ||
|xref=BTO:0000554;;EFO:0002464;;EMAPA:29741;;EV:0100156;;FMA:70660;;GAID:934;;MA:0000154;;MESH:A.10.272.497.500;;ncithesaurus:Hair_Follicle;;OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA;;SCTID:280830006;;VHOG:0001268 | |xref=BTO:0000554;;EFO:0002464;;EMAPA:29741;;EV:0100156;;FMA:70660;;GAID:934;;http://upload.wikimedia.org/wikipedia/commons/4/4d/Hair_follicle-en.svg;;MA:0000154;;MESH:A.10.272.497.500;;ncithesaurus:Hair_Follicle;;OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA;;SCTID:280830006;;VHOG:0001268 | ||
|is_a=UBERON:0000062;;UBERON:0004121 | |is_a=UBERON:0000062;;UBERON:0004121 | ||
|synonym="vibrissa follicle" RELATED [MP:0010234] | |synonym="folliculus pili" RELATED LATIN [Wikipedia:Hair_follicle];;"vibrissa follicle" RELATED [MP:0010234] | ||
|comment=TODO - add new class for MA:0002910 vibrissa follicle | |comment=TODO - add new class for MA:0002910 vibrissa follicle | ||
|alt_id=UBERON:FMA_70660-MA_0000154 | |alt_id=UBERON:FMA_70660-MA_0000154 | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset=organ_slim;;uberon_slim | |subset=organ_slim;;uberon_slim | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:01, 26 June 2012
| Name: | hair follicle | ||
|---|---|---|---|
| Definition: | "a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle] | ||
| Xrefs: |
| ||
| Synonyms: |
"folliculus pili" RELATED LATIN [Wikipedia:Hair_follicle] "vibrissa follicle" RELATED [MP:0010234] | ||
| Comments: | TODO - add new class for MA:0002910 vibrissa follicle | ||
| Alt_id: | UBERON:FMA_70660-MA_0000154 | ||
| Subset: |
organ_slim uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ),UBERON:0004121(ectoderm-derived structure) |
|---|
Children
| is a: | FF:0011174 (Skin - armpit hair follicle) |
|---|---|
| part of: | CL:0002559 (hair follicle cell),UBERON:0005932 (bulb of hair follicle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10283-104F4
- 10311-104I5
- 10339-105C6
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
- 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)
- 11503-119F9
- 11504-119G1 (Hair Follicle Outer Root Sheath Cells, donor1)
- 11505-119G2
- 11583-120F8
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002073 (hair follicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.48e-40 | FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_c015d28145f65b5eed831b94b431a085 | p@chr7:127963997..127964004, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_c015d28145f65b5eed831b94b431a085 | p@chr7:127963997..127964004, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_114b617f474109e0b80d01812b4abcc1 | p@chr16:85617034..85617043, - |
| 3.31e-40 | FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_114b617f474109e0b80d01812b4abcc1 | p@chr16:85617034..85617043, - |
| 4.05e-40 | FFCP PHASE1:Hg19::chr3:4723000..4723006,+#_b0a9ce7f48be9b51d5128f9f62fa028a | p@chr3:4723000..4723006, + |
| 4.05e-40 | FFCP PHASE2:Hg19::chr3:4723000..4723006,+#_b0a9ce7f48be9b51d5128f9f62fa028a | p@chr3:4723000..4723006, + |
| 4.05e-40 | FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_b0a9ce7f48be9b51d5128f9f62fa028a | p@chr5:174252850..174252859, + |
| 4.05e-40 | FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_b0a9ce7f48be9b51d5128f9f62fa028a | p@chr5:174252850..174252859, + |
| 9.7e-37 | FFCP PHASE2:Hg19::chr20:940152..940156,-#_69be01acd67eaf6e7615685ae67f3e9e | p@chr20:940152..940156, - |
| 9.7e-37 | FFCP PHASE1:Hg19::chr20:940152..940156,-#_69be01acd67eaf6e7615685ae67f3e9e | p@chr20:940152..940156, - |
| 3.25e-36 | FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_2e36ec356c082b8cab400ec59e9d341e | p10@TBX15 |
| 3.25e-36 | FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_2e36ec356c082b8cab400ec59e9d341e | p10@TBX15 |
| 4.66e-36 | FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_1cb0e26b2978097fb342f156fd5b50e0 | p@chr17:73682761..73682766, + |
| 4.66e-36 | FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_1cb0e26b2978097fb342f156fd5b50e0 | p@chr17:73682761..73682766, + |
| 1.44e-32 | FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_3582973e7977090934f09a0cdfd9fb3b | p2@ENST00000443993, p2@uc004bya.1 |
| 1.44e-32 | FFCP PHASE2:Hg19::chr1:8950583..8950588,+#_3582973e7977090934f09a0cdfd9fb3b | p@chr1:8950583..8950588, + |
| 1.44e-32 | FFCP PHASE1:Hg19::chr1:8950583..8950588,+#_3582973e7977090934f09a0cdfd9fb3b | p@chr1:8950583..8950588, + |
| 1.44e-32 | FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_3582973e7977090934f09a0cdfd9fb3b | p2@ENST00000443993, p2@uc004bya.1 |
| 1.7e-32 | FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_d9bf96a80df3bbb2bb39ecb2996a40ed | p@chr12:5198401..5198415, + |
| 1.7e-32 | FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_d9bf96a80df3bbb2bb39ecb2996a40ed | p@chr12:2163623..2163634, + |
| 1.7e-32 | FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_d9bf96a80df3bbb2bb39ecb2996a40ed | p@chr12:5198401..5198415, + |
| 1.7e-32 | FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_d9bf96a80df3bbb2bb39ecb2996a40ed | p@chr12:2163623..2163634, + |
| 2.86e-30 | FFCP PHASE1:Hg19::chr7:142563953..142563963,+#_de23cb55eb970dcc0cd1686c0d236e02 | p@chr7:142563953..142563963, + |
| 2.86e-30 | FFCP PHASE2:Hg19::chr7:142563953..142563963,+#_de23cb55eb970dcc0cd1686c0d236e02 | p@chr7:142563953..142563963, + |
| 3.66e-28 | FFCP PHASE2:Hg19::chr15:80842979..80842998,+#_116d6c26ebef9954b211d69e61535618 | p20@ARNT2 |
| 3.66e-28 | FFCP PHASE1:Hg19::chr15:80842979..80842998,+#_116d6c26ebef9954b211d69e61535618 | p20@ARNT2 |
| 3.91e-28 | FFCP PHASE1:Hg19::chr9:89892210..89892234,-#_80a51386f5c756817ee3fc47b0932aee | p@chr9:89892210..89892234, - |
| 3.91e-28 | FFCP PHASE2:Hg19::chr9:89892210..89892234,-#_80a51386f5c756817ee3fc47b0932aee | p@chr9:89892210..89892234, - |
| 7.91e-28 | FFCP PHASE1:Hg19::chr2:119605374..119605377,-#_9da798cd197adb0913005560f0920c0f | p7@EN1 |
| 7.91e-28 | FFCP PHASE2:Hg19::chr2:119605374..119605377,-#_9da798cd197adb0913005560f0920c0f | p7@EN1 |
| 2.72e-27 | FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_4c1682f611d8d2ce4d30ae048a215d0b | p@chr16:85617044..85617059, - |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_4c1682f611d8d2ce4d30ae048a215d0b | p@chr10:15760985..15760992, - |
| 2.72e-27 | FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_4c1682f611d8d2ce4d30ae048a215d0b | p@chr16:85617044..85617059, - |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_4c1682f611d8d2ce4d30ae048a215d0b | p@chr10:15760985..15760992, - |
| 4.63e-27 | FFCP PHASE2:Hg19::chr12:56224522..56224535,-#_1832170f080178fd3e736b1d78266a69 | p7@DNAJC14 |
| 4.63e-27 | FFCP PHASE1:Hg19::chr12:56224522..56224535,-#_1832170f080178fd3e736b1d78266a69 | p7@DNAJC14 |
| 1.85e-26 | FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_96491d6d7420656cfa46d2e3c0a3a6e5 | p@chr18:8747536..8747542, - |
| 1.85e-26 | FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_96491d6d7420656cfa46d2e3c0a3a6e5 | p@chr18:8747536..8747542, - |
| 1.48e-25 | FFCP PHASE1:Hg19::chr2:119605253..119605264,-#_f91dbd582c5eb3d8ce84020b3e9a6742 | p5@EN1 |
| 1.48e-25 | FFCP PHASE2:Hg19::chr2:119605253..119605264,-#_f91dbd582c5eb3d8ce84020b3e9a6742 | p5@EN1 |
| 1.2e-24 | FFCP PHASE1:Hg19::chr11:121896688..121896697,-#_6b93b3c46d58abc454f41d8e16b2a42c | p@chr11:121896688..121896697, - |
| 1.2e-24 | FFCP PHASE2:Hg19::chr11:121896688..121896697,-#_6b93b3c46d58abc454f41d8e16b2a42c | p@chr11:121896688..121896697, - |
| 1.35e-24 | FFCP PHASE1:Hg19::chr15:90348431..90348458,-#_3664f69fb2fd0b7393094bfcca1a58eb | p17@ANPEP |
| 1.35e-24 | FFCP PHASE2:Hg19::chr15:90348431..90348458,-#_3664f69fb2fd0b7393094bfcca1a58eb | p17@ANPEP |
| 1.02e-23 | FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_d0061af3168c68039949b89cfd5b7699 | p@chr15:39534820..39534834, + |
| 1.02e-23 | FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_d0061af3168c68039949b89cfd5b7699 | p@chr15:39534820..39534834, + |
| 1.14e-23 | FFCP PHASE2:Hg19::chr2:238153616..238153621,-#_2b9e384a8fbfc6e300583565bbd1f7dd | p@chr2:238153616..238153621, - |
| 1.14e-23 | FFCP PHASE1:Hg19::chr2:238153616..238153621,-#_2b9e384a8fbfc6e300583565bbd1f7dd | p@chr2:238153616..238153621, - |
| 1.61e-23 | FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_6409aae17e0ab712a66c2c3802e6ad51 | p@chr3:147109858..147109861, + |
| 1.61e-23 | FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_6409aae17e0ab712a66c2c3802e6ad51 | p@chr3:147109858..147109861, + |
| 1.81e-23 | FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_bd3be5d499343d7f5cca6b023d3123c6 | p4@AB464362 |
| 1.81e-23 | FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_bd3be5d499343d7f5cca6b023d3123c6 | p4@AB464362 |
| 2.77e-23 | FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_da2cafd6013b5b959d472e78590c8d9a | p@chr3:147112699..147112713, - |
| 2.77e-23 | FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_da2cafd6013b5b959d472e78590c8d9a | p@chr3:147112699..147112713, - |
| 3.75e-23 | FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_c0df9c639392b3c438b340ce86d29250 | p@chr21:47405885..47405896, + |
| 3.75e-23 | FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_c0df9c639392b3c438b340ce86d29250 | p@chr21:47405885..47405896, + |
| 5.46e-23 | FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_f65cab9c54dda6b27cb407824c9435cf | p@chr15:80800274..80800278, - |
| 5.46e-23 | FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_f65cab9c54dda6b27cb407824c9435cf | p@chr15:80800274..80800278, - |
| 8.54e-23 | FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_e6457b8376d059f3175af7f827937b1f | p@chr6:5498703..5498727, + |
| 8.54e-23 | FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_e6457b8376d059f3175af7f827937b1f | p@chr6:5498703..5498727, + |
| 3.99e-22 | FFCP PHASE2:Hg19::chr2:119605233..119605245,-#_b1edf89ed1a072ce3d78f5f4beece698 | p8@EN1 |
| 3.99e-22 | FFCP PHASE1:Hg19::chr2:119605233..119605245,-#_b1edf89ed1a072ce3d78f5f4beece698 | p8@EN1 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr13:30075330..30075333,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr13:30075330..30075333, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_2c203bc05179e6b888462ae1191eb4b9 | p15@FAS |
| 5.15e-21 | FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr20:55403726..55403730, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr12:69754026..69754035, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_2c203bc05179e6b888462ae1191eb4b9 | p13@ADPRHL1 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr7:93928562..93928567, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr13:50654430..50654438, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_2c203bc05179e6b888462ae1191eb4b9 | p25@ZCCHC6 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr9:3330877..3330914, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr5:53358788..53358795, - |
| 5.15e-21 | FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_2c203bc05179e6b888462ae1191eb4b9 | p14@TPT1 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr8:23210765..23210805, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr5:150398982..150399013, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr3:124485247..124485272, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr4:151246994..151247003, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr13:30075330..30075333, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr6:26305727..26305730, - |
| 5.15e-21 | FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr11:118789349..118789355, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr12:69754026..69754035, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_2c203bc05179e6b888462ae1191eb4b9 | p13@GBA2 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_2c203bc05179e6b888462ae1191eb4b9 | p1@ENST00000489027 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_2c203bc05179e6b888462ae1191eb4b9 | p13@ADPRHL1 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_2c203bc05179e6b888462ae1191eb4b9 | p33@MLLT4 |
| 5.15e-21 | FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr20:55403726..55403730, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_2c203bc05179e6b888462ae1191eb4b9 | p11@LCLAT1 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_2c203bc05179e6b888462ae1191eb4b9 | p14@PRKCDBP |
| 5.15e-21 | FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr7:93928562..93928567, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_2c203bc05179e6b888462ae1191eb4b9 | p15@FAS |
| 5.15e-21 | FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_2c203bc05179e6b888462ae1191eb4b9 | p14@TPT1 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr5:53358788..53358795, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr15:40773537..40773544,-#_2c203bc05179e6b888462ae1191eb4b9 | p1@ENST00000489027 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr13:50654430..50654438, + |
| 5.15e-21 | FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_2c203bc05179e6b888462ae1191eb4b9 | p25@ZCCHC6 |
| 5.15e-21 | FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr3:124485247..124485272, - |
| 5.15e-21 | FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr6:26305727..26305730, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_2c203bc05179e6b888462ae1191eb4b9 | p@chr9:3330877..3330914, - |
| 5.15e-21 | FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_2c203bc05179e6b888462ae1191eb4b9 | p@chr11:118789349..118789355, + |
| 5.15e-21 | FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_2c203bc05179e6b888462ae1191eb4b9 | p13@GBA2 |
