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|namespace=
|namespace=
|def="Alveolar ducts are the tiny end ducts of the branching airways that fill the lungs. Each lung holds approximately 1.5 to 2 million of them. The tubules divide into two or three alveolar sacs at the distal end. They are formed from the confluence openings of several alveoli. Distal terminations of alveolar ducts are atria which then end in alveolar sacs. In human anatomy, respiratory bronchioles exists proximal to the alveolar ducts. The epithelial lining consists of smooth muscle knobs covered by nonciliated, simple cuboidal cells. The smooth muscle constricts under parasympathetic innervation and relax under sympathetic innervation. [WP,unvetted]." [Wikipedia:Alveolar_duct]
|def="Alveolar ducts are the tiny end ducts of the branching airways that fill the lungs. Each lung holds approximately 1.5 to 2 million of them. The tubules divide into two or three alveolar sacs at the distal end. They are formed from the confluence openings of several alveoli. Distal terminations of alveolar ducts are atria which then end in alveolar sacs. In human anatomy, respiratory bronchioles exists proximal to the alveolar ducts. The epithelial lining consists of smooth muscle knobs covered by nonciliated, simple cuboidal cells. The smooth muscle constricts under parasympathetic innervation and relax under sympathetic innervation. [WP,unvetted]." [Wikipedia:Alveolar_duct]
|xref=EMAPA:19183;;EMAPA:19185;;EMAPA:19187;;EMAPA:19189;;EMAPA:19191;;FMA:7341;;MA:0000417;;ncithesaurus:Alveolar_Duct;;OpenCyc:Mx4rvXmfV5wpEbGdrcN5Y29ycA
|xref=EMAPA:19183;;EMAPA:19185;;EMAPA:19187;;EMAPA:19189;;EMAPA:19191;;FMA:7341;;http://upload.wikimedia.org/wikipedia/commons/8/8f/Gray975.png;;MA:0000417;;ncithesaurus:Alveolar_Duct;;OpenCyc:Mx4rvXmfV5wpEbGdrcN5Y29ycA
|is_a=UBERON:0000058;;UBERON:0000077
|is_a=UBERON:0000058;;UBERON:0004119
|synonym=
|synonym=
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002048;;UBERON:0006524
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:01, 26 June 2012

Name:alveolar duct
Definition:"Alveolar ducts are the tiny end ducts of the branching airways that fill the lungs. Each lung holds approximately 1.5 to 2 million of them. The tubules divide into two or three alveolar sacs at the distal end. They are formed from the confluence openings of several alveoli. Distal terminations of alveolar ducts are atria which then end in alveolar sacs. In human anatomy, respiratory bronchioles exists proximal to the alveolar ducts. The epithelial lining consists of smooth muscle knobs covered by nonciliated, simple cuboidal cells. The smooth muscle constricts under parasympathetic innervation and relax under sympathetic innervation. [WP,unvetted]." [Wikipedia:Alveolar_duct]
Xrefs:
links:

EMAPA:19183
EMAPA:19185
EMAPA:19187
EMAPA:19189
EMAPA:19191
FMA:7341
[ Gray975.png Gray975.png]
MA:0000417
ncithesaurus:Alveolar_Duct

OpenCyc:Mx4rvXmfV5wpEbGdrcN5Y29ycA
Alt_id: UBERON:FMA_7341-MA_0000417
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0004119(endoderm-derived structure)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
  • 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
  • 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002173 (alveolar duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_dd2e1923f0d8731e9eb1f990165788b2p14@DNMBP
1.55e-98FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_dd2e1923f0d8731e9eb1f990165788b2p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_dd2e1923f0d8731e9eb1f990165788b2p1@ENST00000430271
1.55e-98FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_dd2e1923f0d8731e9eb1f990165788b2p12@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_dd2e1923f0d8731e9eb1f990165788b2p14@DNMBP
1.55e-98FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_dd2e1923f0d8731e9eb1f990165788b2p13@DNMBP
1.55e-98FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_dd2e1923f0d8731e9eb1f990165788b2p9@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_dd2e1923f0d8731e9eb1f990165788b2p16@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_dd2e1923f0d8731e9eb1f990165788b2p13@DNMBP
1.55e-98FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_dd2e1923f0d8731e9eb1f990165788b2p1@SSX5
1.55e-98FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr14:36536932..36536937, -
1.55e-98FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr14:36536932..36536937, -
1.55e-98FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_dd2e1923f0d8731e9eb1f990165788b2p12@CLEC16A
1.55e-98FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_dd2e1923f0d8731e9eb1f990165788b2p13@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_dd2e1923f0d8731e9eb1f990165788b2p1@ENST00000430271
1.55e-98FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_dd2e1923f0d8731e9eb1f990165788b2p12@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_dd2e1923f0d8731e9eb1f990165788b2p9@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_dd2e1923f0d8731e9eb1f990165788b2p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_dd2e1923f0d8731e9eb1f990165788b2p16@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_dd2e1923f0d8731e9eb1f990165788b2p12@CLEC16A
1.55e-98FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_dd2e1923f0d8731e9eb1f990165788b2p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_dd2e1923f0d8731e9eb1f990165788b2p13@CPXM1
1.55e-98FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_dd2e1923f0d8731e9eb1f990165788b2p1@SSX5
3.96e-66FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_cd6ceda5f2a0233544eaca55652f4658p@chr2:191696381..191696384, -
3.96e-66FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_cd6ceda5f2a0233544eaca55652f4658p@chr2:191696381..191696384, -
2.74e-50FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_3a4086e290e5b3c50f2b7d875db16911p@chr4:169956294..169956301, -
2.74e-50FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_3a4086e290e5b3c50f2b7d875db16911p@chr9:103785643..103785646, -
2.74e-50FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_3a4086e290e5b3c50f2b7d875db16911p11@DNMBP
2.74e-50FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_3a4086e290e5b3c50f2b7d875db16911p30@PDP1
2.74e-50FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_3a4086e290e5b3c50f2b7d875db16911p11@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_3a4086e290e5b3c50f2b7d875db16911p@chr9:103785643..103785646, -
2.74e-50FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_3a4086e290e5b3c50f2b7d875db16911p@chr8:122157279..122157284, -
2.74e-50FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_3a4086e290e5b3c50f2b7d875db16911p3@FMR1NB
2.74e-50FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_3a4086e290e5b3c50f2b7d875db16911p30@NELF
2.74e-50FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_3a4086e290e5b3c50f2b7d875db16911p@chr11:104005546..104005596, -
2.74e-50FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_3a4086e290e5b3c50f2b7d875db16911p30@PDP1
2.74e-50FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_3a4086e290e5b3c50f2b7d875db16911p@chr4:169956294..169956301, -
2.74e-50FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_3a4086e290e5b3c50f2b7d875db16911p@chr11:104005546..104005596, -
2.74e-50FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_3a4086e290e5b3c50f2b7d875db16911p7@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_3a4086e290e5b3c50f2b7d875db16911p@chr11:106266838..106266843, +
2.74e-50FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_3a4086e290e5b3c50f2b7d875db16911p@chr11:41809203..41809208, -
2.74e-50FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_3a4086e290e5b3c50f2b7d875db16911p30@NELF
2.74e-50FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_3a4086e290e5b3c50f2b7d875db16911p7@DNMBP
2.74e-50FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_3a4086e290e5b3c50f2b7d875db16911p@chr11:106266838..106266843, +
2.74e-50FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_3a4086e290e5b3c50f2b7d875db16911p@chr8:122157279..122157284, -
2.74e-50FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_3a4086e290e5b3c50f2b7d875db16911p@chr11:41809203..41809208, -
2.74e-50FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_3a4086e290e5b3c50f2b7d875db16911p3@FMR1NB
4.52e-50FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p6@INSIG2
4.52e-50FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p36@NELF
4.52e-50FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:169691363..169691375, -
4.52e-50FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr12:65386452..65386492, -
4.52e-50FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr17:63533845..63533851, -
4.52e-50FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr12:65386452..65386492, -
4.52e-50FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr3:139035972..139036016, -
4.52e-50FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399533..45399540, +
4.52e-50FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45405393..45405412, +
4.52e-50FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399263..45399274, +
4.52e-50FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr1:119837700..119837705, +
4.52e-50FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p12@AADAT
4.52e-50FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr15:55806847..55806854, -
4.52e-50FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399245..45399258, +
4.52e-50FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p34@NELF
4.52e-50FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p6@INSIG2
4.52e-50FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p36@NELF
4.52e-50FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p5@C20orf141
4.52e-50FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399294..45399301, +
4.52e-50FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:46985426..46985427, -
4.52e-50FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr1:93054640..93054674, -
4.52e-50FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399263..45399274, +
4.52e-50FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45405332..45405343, +
4.52e-50FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr1:119837700..119837705, +
4.52e-50FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr17:63533845..63533851, -
4.52e-50FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p34@NELF
4.52e-50FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr3:139035972..139036016, -
4.52e-50FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:141743015..141743025, +
4.52e-50FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45405393..45405412, +
4.52e-50FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399294..45399301, +
4.52e-50FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:169691363..169691375, -
4.52e-50FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p12@AADAT
4.52e-50FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr15:55806847..55806854, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399533..45399540, +
4.52e-50FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p5@C20orf141
4.52e-50FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45405332..45405343, +
4.52e-50FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:45399245..45399258, +
4.52e-50FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:141743015..141743025, +
4.52e-50FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr6:46985426..46985427, -
4.52e-50FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_ceb8bbae41d3e2a24f5f39e4bb620f77p@chr1:93054640..93054674, -
4.0e-45FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_a957951012b1704597bfd4d7a90e5200p1@BC018659
4.0e-45FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_a957951012b1704597bfd4d7a90e5200p1@BC018659
1.1e-40FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_b267a4ea44991b21645002bc57d7c45fp@chr14:29047235..29047244, +
1.1e-40FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_b267a4ea44991b21645002bc57d7c45fp@chr14:29047235..29047244, +
3.61e-34FFCP PHASE1:Hg19::chr8:144260966..144260967,-#_7ab190b1d2fc382ffda3f1b1e8727ce6p@chr8:144260966..144260967, -
3.61e-34FFCP PHASE1:Hg19::chr1:87994589..87994604,-#_7ab190b1d2fc382ffda3f1b1e8727ce6p@chr1:87994589..87994604, -
3.61e-34FFCP PHASE1:Hg19::chr11:47256459..47256470,+#_7ab190b1d2fc382ffda3f1b1e8727ce6p@chr11:47256459..47256470, +
3.61e-34FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_7ab190b1d2fc382ffda3f1b1e8727ce6p@chr6:73786620..73786627, +

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