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|namespace=
|namespace=
|def="." [HP:0000284]
|def="." [HP:0000284]
|xref=
|xref=FMA:260119
|is_a=UBERON:0000061
|is_a=UBERON:0000477
|synonym="eye region" EXACT [OBOL:automatic]
|synonym="content of orbital part of eye" EXACT [FMA:260119];;"eye region" EXACT [OBOL:automatic]
|comment=in HP covers eyelid, eyebrow
|comment=TODO: consider the following: eyeball (eye proper) part_of eye (= eyeball+eyelid etc) part_of ocular region (= eye + eyebrow); note the FMA class is more narrow though, and is more like eye + muscles + vasculature // in HP covers eyelid, eyebrow
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0001456
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:04, 26 June 2012

Name:ocular region
Definition:"." [HP:0000284]
Xrefs:
links:
FMA:260119
Synonyms: "content of orbital part of eye" EXACT [FMA:260119]
"eye region" EXACT [OBOL:automatic]
Comments:TODO: consider the following: eyeball (eye proper) part_of eye (= eyeball+eyelid etc) part_of ocular region (= eye + eyebrow); note the FMA class is more narrow though, and is more like eye + muscles + vasculature // in HP covers eyelid, eyebrow

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000477(anatomical cluster)



Children

part of:UBERON:0000019 (camera-type eye)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004088 (ocular region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.31e-86FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_bf123f4ba155748dead7c4110fcc1c2bp4@Dct
1.31e-86FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_bf123f4ba155748dead7c4110fcc1c2bp1@E130218I03Rik
1.31e-86FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_bf123f4ba155748dead7c4110fcc1c2bp3@Osbp2
1.31e-86FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_bf123f4ba155748dead7c4110fcc1c2bp5@Zfp365
1.31e-86FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31815126..31815139, -
1.31e-86FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_bf123f4ba155748dead7c4110fcc1c2bp6@Celf1
1.31e-86FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31818263..31818276, +
1.31e-86FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_bf123f4ba155748dead7c4110fcc1c2bp1@Mir184
1.31e-86FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_bf123f4ba155748dead7c4110fcc1c2bp8@Osbp2
1.31e-86FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr11:77532391..77532408, -
1.31e-86FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr11:77532391..77532408, -
1.31e-86FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_bf123f4ba155748dead7c4110fcc1c2bp5@Zfp365
1.31e-86FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31817987..31818013, +
1.31e-86FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr11:77532283..77532316, -
1.31e-86FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_bf123f4ba155748dead7c4110fcc1c2bp3@Osbp2
1.31e-86FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31815126..31815139, -
1.31e-86FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr10:127668442..127668453, +
1.31e-86FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31818106..31818119, +
1.31e-86FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr16:21743134..21743139, -
1.31e-86FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr3:129525389..129525400, -
1.31e-86FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr3:129525389..129525400, -
1.31e-86FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_bf123f4ba155748dead7c4110fcc1c2bp1@E130218I03Rik
1.31e-86FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_bf123f4ba155748dead7c4110fcc1c2bp8@Osbp2
1.31e-86FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31818263..31818276, +
1.31e-86FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr11:77532283..77532316, -
1.31e-86FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_bf123f4ba155748dead7c4110fcc1c2bp6@Celf1
1.31e-86FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_bf123f4ba155748dead7c4110fcc1c2bp4@Dct
1.31e-86FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_bf123f4ba155748dead7c4110fcc1c2bp@chr16:21743134..21743139, -
1.31e-86FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr10:127668442..127668453, +
1.31e-86FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31818106..31818119, +
1.31e-86FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_bf123f4ba155748dead7c4110fcc1c2bp@chr17:31817987..31818013, +
1.31e-86FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_bf123f4ba155748dead7c4110fcc1c2bp1@Mir184
2.3e-78FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_cc2d23cc6ec70e36de9c4cda376cb444p3@LOC100504989, p3@Timeless
2.3e-78FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_cc2d23cc6ec70e36de9c4cda376cb444p@chr7:64675015..64675028, +
2.3e-78FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_cc2d23cc6ec70e36de9c4cda376cb444p@chr7:64675015..64675028, +
2.3e-78FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_cc2d23cc6ec70e36de9c4cda376cb444p3@LOC100504989, p3@Timeless
2.82e-78FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_c68ee37678299e02158da29a46af1c7ep6@Pax6
2.82e-78FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_c68ee37678299e02158da29a46af1c7ep6@Pax6
2.82e-78FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_c68ee37678299e02158da29a46af1c7ep@chr6:97891135..97891147, +
2.82e-78FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_c68ee37678299e02158da29a46af1c7ep@chr6:97891135..97891147, +
3.46e-78FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_8bc55d144a787becd1021cfc52510be4p1@4933429O19Rik
3.46e-78FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_8bc55d144a787becd1021cfc52510be4p1@4933429O19Rik
4.97e-77FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113506190..113506202, -
4.97e-77FFCP PHASE1:Mm9::chr5:113506006..113506025,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113506006..113506025, -
4.97e-77FFCP PHASE2:Mm9::chr3:129525435..129525448,-#_7b1a7e9fdf58d31a702781dbb16e7cdap2@Rrh
4.97e-77FFCP PHASE1:Mm9::chr3:129525435..129525448,-#_7b1a7e9fdf58d31a702781dbb16e7cdap2@Rrh
4.97e-77FFCP PHASE1:Mm9::chr1:65146997..65147021,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr1:65146997..65147021, -
4.97e-77FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_7b1a7e9fdf58d31a702781dbb16e7cdap2@Cryga
4.97e-77FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_7b1a7e9fdf58d31a702781dbb16e7cdap2@Cryga
4.97e-77FFCP PHASE2:Mm9::chr5:112690963..112690994,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112690963..112690994, +
4.97e-77FFCP PHASE1:Mm9::chr5:112692580..112692595,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112692580..112692595, +
4.97e-77FFCP PHASE2:Mm9::chr8:77582172..77582183,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr8:77582172..77582183, +
4.97e-77FFCP PHASE1:Mm9::chr10:127668480..127668491,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr10:127668480..127668491, +
4.97e-77FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr7:28282354..28282365, +
4.97e-77FFCP PHASE1:Mm9::chr17:31818215..31818239,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr17:31818215..31818239, -
4.97e-77FFCP PHASE2:Mm9::chr5:113507470..113507483,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113507470..113507483, -
4.97e-77FFCP PHASE2:Mm9::chr5:112686483..112686494,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112686483..112686494, +
4.97e-77FFCP PHASE1:Mm9::chr5:112688342..112688357,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112688342..112688357, +
4.97e-77FFCP PHASE2:Mm9::chr5:112692580..112692595,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112692580..112692595, +
4.97e-77FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_7b1a7e9fdf58d31a702781dbb16e7cdap4@LOC100504989, p4@Timeless
4.97e-77FFCP PHASE1:Mm9::chr1:152166537..152166579,+#_7b1a7e9fdf58d31a702781dbb16e7cdap1@Pdc
4.97e-77FFCP PHASE2:Mm9::chr17:31816514..31816526,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr17:31816514..31816526, +
4.97e-77FFCP PHASE1:Mm9::chr5:112690963..112690994,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112690963..112690994, +
4.97e-77FFCP PHASE2:Mm9::chr1:65146997..65147021,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr1:65146997..65147021, -
4.97e-77FFCP PHASE1:Mm9::chr17:31817947..31817965,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr17:31817947..31817965, +
4.97e-77FFCP PHASE1:Mm9::chr6:115162924..115162933,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr6:115162924..115162933, +
4.97e-77FFCP PHASE2:Mm9::chr1:38092538..38092550,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr1:38092538..38092550, +
4.97e-77FFCP PHASE1:Mm9::chr10:93761330..93761358,-#_7b1a7e9fdf58d31a702781dbb16e7cdap1@Gm4792
4.97e-77FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr8:77582172..77582183, +
4.97e-77FFCP PHASE2:Mm9::chr17:31816584..31816600,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr17:31816584..31816600, +
4.97e-77FFCP PHASE2:Mm9::chr5:113504891..113504916,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113504891..113504916, -
4.97e-77FFCP PHASE2:Mm9::chr3:129525452..129525463,-#_7b1a7e9fdf58d31a702781dbb16e7cdap3@Rrh
4.97e-77FFCP PHASE1:Mm9::chr3:129525452..129525463,-#_7b1a7e9fdf58d31a702781dbb16e7cdap3@Rrh
4.97e-77FFCP PHASE2:Mm9::chr11:77532270..77532280,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr11:77532270..77532280, -
4.97e-77FFCP PHASE1:Mm9::chr7:29477874..29477889,+#_7b1a7e9fdf58d31a702781dbb16e7cdap6@Fbxo27
4.97e-77FFCP PHASE1:Mm9::chr5:113507470..113507483,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113507470..113507483, -
4.97e-77FFCP PHASE1:Mm9::chr11:95705150..95705170,+#_7b1a7e9fdf58d31a702781dbb16e7cdap3@Gngt2
4.97e-77FFCP PHASE2:Mm9::chr6:115162924..115162933,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr6:115162924..115162933, +
4.97e-77FFCP PHASE2:Mm9::chr6:85969237..85969247,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr6:85969237..85969247, +
4.97e-77FFCP PHASE2:Mm9::chr10:127668799..127668810,+#_7b1a7e9fdf58d31a702781dbb16e7cdap5@LOC100504989, p5@Timeless
4.97e-77FFCP PHASE1:Mm9::chr14:52730585..52730607,+#_7b1a7e9fdf58d31a702781dbb16e7cdap1@Rpgrip1
4.97e-77FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr15:36655026..36655032, +
4.97e-77FFCP PHASE1:Mm9::chr1:38092602..38092616,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr1:38092602..38092616, +
4.97e-77FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112681470..112681483, -
4.97e-77FFCP PHASE1:Mm9::chr8:77582194..77582219,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr8:77582194..77582219, +
4.97e-77FFCP PHASE1:Mm9::chr5:112686483..112686494,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112686483..112686494, +
4.97e-77FFCP PHASE2:Mm9::chr5:112691047..112691066,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112691047..112691066, +
4.97e-77FFCP PHASE1:Mm9::chr5:112696408..112696421,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112696408..112696421, -
4.97e-77FFCP PHASE2:Mm9::chr8:77582194..77582219,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr8:77582194..77582219, +
4.97e-77FFCP PHASE1:Mm9::chr11:77532270..77532280,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr11:77532270..77532280, -
4.97e-77FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_7b1a7e9fdf58d31a702781dbb16e7cdap4@LOC100504989, p4@Timeless
4.97e-77FFCP PHASE2:Mm9::chr5:112690729..112690741,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112690729..112690741, +
4.97e-77FFCP PHASE1:Mm9::chr14:49501519..49501530,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr14:49501519..49501530, -
4.97e-77FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr17:31818629..31818644, +
4.97e-77FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr14:49501519..49501530, -
4.97e-77FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_7b1a7e9fdf58d31a702781dbb16e7cdap1@Impg2
4.97e-77FFCP PHASE2:Mm9::chr5:112696408..112696421,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112696408..112696421, -
4.97e-77FFCP PHASE1:Mm9::chr5:113504891..113504916,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:113504891..113504916, -
4.97e-77FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_7b1a7e9fdf58d31a702781dbb16e7cdap1@Impg2
4.97e-77FFCP PHASE1:Mm9::chr5:112675556..112675574,-#_7b1a7e9fdf58d31a702781dbb16e7cdap@chr5:112675556..112675574, -

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