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|namespace=
|namespace=
|def="A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[OG]. The septum transversum is a portion of the trunk mesenchyme[GO]." [GO:0003343, VHOG:0000019, Wikipedia:Septum_transversum]
|def="A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[OG]. The septum transversum is a portion of the trunk mesenchyme[GO]." [GO:0003343, VHOG:0000019, Wikipedia:Septum_transversum]
|xref=EHDAA:736;;EHDAA2:0001829;;EMAPA:16318;;ncithesaurus:Septum_Transversum;;SCTID:308819008;;VHOG:0000019
|xref=EHDAA2:0001829;;EHDAA:736;;EMAPA:16318;;ncithesaurus:Septum_Transversum;;SCTID:308819008;;VHOG:0000019
|is_a=UBERON:0003104;;UBERON:0005256
|is_a=UBERON:0005256
|synonym="transverse septum" EXACT [UBERON:cjm]
|synonym="transverse septum" EXACT [UBERON:cjm]
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002100
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:04, 26 June 2012

Name:septum transversum
Definition:"A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[OG]. The septum transversum is a portion of the trunk mesenchyme[GO]." [GO:0003343, VHOG:0000019, Wikipedia:Septum_transversum]
Xrefs:
links:

EHDAA2:0001829
EHDAA:736
EMAPA:16318
ncithesaurus:Septum_Transversum
SCTID:308819008

VHOG:0000019
Synonyms: "transverse septum" EXACT [UBERON:cjm]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005256(trunk mesenchyme)



Children

develops from:UBERON:0002107 (liver),UBERON:0004912 (biliary bud)
part of:UBERON:0008835 (hepatic diverticulum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004161 (septum transversum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.2e-75FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_63ec545a56671c3d76816235433c8640p5@NR1H4
9.2e-75FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_63ec545a56671c3d76816235433c8640p5@NR1H4
1.22e-72FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_e291c7b3cab94768da1e0c81a7205672p@chr5:90897694..90897705, +
1.22e-72FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_e291c7b3cab94768da1e0c81a7205672p@chr5:90897694..90897705, +
2.2e-72FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_62e0c0b15a8fefa772d7319ddc8c03e7p@chr19:25169885..25169900, +
2.2e-72FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_62e0c0b15a8fefa772d7319ddc8c03e7p@chr19:25169885..25169900, +
5.51e-71FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_11a0125eeedeec5d8d5352524fa740f3p6@Insc
5.51e-71FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_11a0125eeedeec5d8d5352524fa740f3p6@Insc
1.64e-70FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_c46d8e74c46cf1ea368077581a971d92p1@ENST00000421143
1.64e-70FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_c46d8e74c46cf1ea368077581a971d92p1@ENST00000421143
1.7e-70FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_6aeaa1de3f95ba182548ad602d073871p2@uc009nzu.1
1.7e-70FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_6aeaa1de3f95ba182548ad602d073871p2@uc009nzu.1
1.28e-68FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_ee16265396d7350ee84ccb552f0e6b56p5@Bhmt
1.28e-68FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_ee16265396d7350ee84ccb552f0e6b56p5@Bhmt
2.72e-68FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_604fa00b4c6aaabe3808f26a6888d796p@chr1:162917234..162917248, +
2.72e-68FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_604fa00b4c6aaabe3808f26a6888d796p@chr1:162917234..162917248, +
3.5e-68FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_f8d8bbd4adf7c9c2955d51c2c980ba1cp1@Rtp3
3.5e-68FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_f8d8bbd4adf7c9c2955d51c2c980ba1cp1@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_b6e7f9890b787c2fc0e1662b828967e6p2@Rtp3
2.47e-67FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_b6e7f9890b787c2fc0e1662b828967e6p2@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_b6e7f9890b787c2fc0e1662b828967e6p@chr7:112744083..112744109, -
2.47e-67FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_b6e7f9890b787c2fc0e1662b828967e6p@chr7:112744083..112744109, -
6.55e-67FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_d86c75737d8e1423286b4fd5c7b6806dp@chr13:23928766..23928779, +
6.55e-67FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_d86c75737d8e1423286b4fd5c7b6806dp@chr13:23928766..23928779, +
7.85e-67FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_35c507bea4033e7d707de8f34649ff02p3@Blvrb
7.85e-67FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_35c507bea4033e7d707de8f34649ff02p3@Blvrb
1.58e-66FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_74fc5b293e3cae7c71c2c132344dd060p@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_74fc5b293e3cae7c71c2c132344dd060p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_74fc5b293e3cae7c71c2c132344dd060p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_74fc5b293e3cae7c71c2c132344dd060p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_74fc5b293e3cae7c71c2c132344dd060p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_74fc5b293e3cae7c71c2c132344dd060p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_74fc5b293e3cae7c71c2c132344dd060p@chr16:22894900..22894910, +
1.58e-66FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_74fc5b293e3cae7c71c2c132344dd060p@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_74fc5b293e3cae7c71c2c132344dd060p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_74fc5b293e3cae7c71c2c132344dd060p@chr16:22894900..22894910, +
1.17e-64FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_76023b229832bf132d9da4ba1aa49e50p@chr1:173155793..173155841, +
1.17e-64FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_76023b229832bf132d9da4ba1aa49e50p@chr1:173155793..173155841, +
1.34e-64FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_514438f81a0b3789ff7579564b29a331p@chr17:12588483..12588503, +
1.34e-64FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_514438f81a0b3789ff7579564b29a331p@chr17:12588483..12588503, +
1.38e-64FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_ce209a04a0076eeecef336e6d9148ef4p@chr17:12584645..12584657, +
1.38e-64FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_ce209a04a0076eeecef336e6d9148ef4p@chr17:12584645..12584657, +
1.62e-64FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_9be4c319056b0c52e7ed3ff5fa1232a9p@chr1:166179426..166179437, +
1.62e-64FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_9be4c319056b0c52e7ed3ff5fa1232a9p@chr1:166179426..166179437, +
1.68e-64FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_e7639ade5cd5fc8d9dffc152433cee2bp@chr8:34917332..34917357, -
1.68e-64FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_e7639ade5cd5fc8d9dffc152433cee2bp@chr8:34917332..34917357, -
4.38e-64FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_0215f55f8c48a97310ff078f8089f28fp@chr19:38191263..38191291, -
4.38e-64FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_0215f55f8c48a97310ff078f8089f28fp@chr19:38191263..38191291, -
9.3e-64FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_12f03f985545634c4db82ed622991b27p8@Insc
9.3e-64FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_12f03f985545634c4db82ed622991b27p8@Insc
1.1e-63FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_5e98e15cea2356c6a2e6d3928fcc54edp@chr5:90893974..90893978, +
1.1e-63FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_5e98e15cea2356c6a2e6d3928fcc54edp@chr5:90893974..90893978, +
1.7e-63FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_50de8277212a1c119f1dafd9f451b0f1p1@uc009nzu.1
1.7e-63FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_50de8277212a1c119f1dafd9f451b0f1p1@uc009nzu.1
1.85e-63FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_53c027a654b3ef9402353c423fa3bc48p3@Klkb1
1.85e-63FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_53c027a654b3ef9402353c423fa3bc48p3@Klkb1
2.02e-63FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_c8f927e10998b33b4dfd63dd82dfe896p@chr3:57191661..57191672, -
2.02e-63FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_c8f927e10998b33b4dfd63dd82dfe896p@chr3:57191661..57191672, -
2.18e-63FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_327b9249252f7d707a020adf0de5ab65p@chr17:12583153..12583171, +
2.18e-63FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_327b9249252f7d707a020adf0de5ab65p@chr17:12583153..12583171, +
2.2e-63FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_a04ec28e2b9f90a9bff48a8019444db3p@chr3:82814412..82814431, +
2.2e-63FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_a04ec28e2b9f90a9bff48a8019444db3p@chr3:82814412..82814431, +
3.67e-63FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_e3eab79b379c2a408264c3cbecdb22fap3@Fam47e
3.67e-63FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_e3eab79b379c2a408264c3cbecdb22fap3@Fam47e
5.17e-63FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr16:22895330..22895339, -
5.17e-63FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr16:22895330..22895339, -
5.17e-63FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr8:92849825..92849837, -
5.17e-63FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_5702a56e96e45942342cc4ca09d1c9d4p@chr15:77605636..77605639, +
5.17e-63FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_5702a56e96e45942342cc4ca09d1c9d4p@chr3:82835513..82835525, +
5.17e-63FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_5702a56e96e45942342cc4ca09d1c9d4p@chr3:82835513..82835525, +
5.17e-63FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr16:23449901..23449906, -
5.17e-63FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr8:92849825..92849837, -
5.17e-63FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_5702a56e96e45942342cc4ca09d1c9d4p@chr15:77605636..77605639, +
5.17e-63FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_5702a56e96e45942342cc4ca09d1c9d4p@chr16:23449901..23449906, -
6.19e-63FFCP PHASE1:Mm9::chr16:22896674..22896687,-#_ac72ca36bc2fc694393e2c34df3396eep@chr16:22896674..22896687, -
6.19e-63FFCP PHASE2:Mm9::chr16:22896674..22896687,-#_ac72ca36bc2fc694393e2c34df3396eep@chr16:22896674..22896687, -
6.77e-63FFCP PHASE1:Mm9::chr17:12577256..12577270,+#_a3377d88ad76a84eb7cc70c4126b7735p@chr17:12577256..12577270, +
6.77e-63FFCP PHASE2:Mm9::chr17:12577256..12577270,+#_a3377d88ad76a84eb7cc70c4126b7735p@chr17:12577256..12577270, +
6.95e-63FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_38f4f3a826f3e720d2d6ac9f52c896c1p2@Cyp4f15
6.95e-63FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_38f4f3a826f3e720d2d6ac9f52c896c1p2@Cyp4f15
7.62e-63FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_358e563a74c762efb1388fba2a12ef36p7@TOP1MT
7.62e-63FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_358e563a74c762efb1388fba2a12ef36p58@APOB
7.62e-63FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_358e563a74c762efb1388fba2a12ef36p58@APOB
7.62e-63FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_358e563a74c762efb1388fba2a12ef36p7@TOP1MT
9.86e-63FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_91aae1f64a948f3f15b80f107bf9c7efp@chr11:60622345..60622377, -
9.86e-63FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_91aae1f64a948f3f15b80f107bf9c7efp@chr11:60622345..60622377, -
1.39e-62FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_b0d07054867326886be01dc7c7a9fdd3p@chr16:22899236..22899246, +
1.39e-62FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_b0d07054867326886be01dc7c7a9fdd3p@chr16:22899322..22899331, +
1.39e-62FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_b0d07054867326886be01dc7c7a9fdd3p@chr16:22895286..22895297, -
1.39e-62FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_b0d07054867326886be01dc7c7a9fdd3p@chr16:22895286..22895297, -
1.39e-62FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_b0d07054867326886be01dc7c7a9fdd3p@chr6:128438012..128438027, -
1.39e-62FFCP PHASE1:Mm9::chr12:105002005..105002050,-#_b0d07054867326886be01dc7c7a9fdd3p@chr12:105002005..105002050, -
1.39e-62FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_b0d07054867326886be01dc7c7a9fdd3p@chr6:11948347..11948351, -
1.39e-62FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_b0d07054867326886be01dc7c7a9fdd3p@chr6:128436196..128436215, -
1.39e-62FFCP PHASE2:Mm9::chr6:128438012..128438027,-#_b0d07054867326886be01dc7c7a9fdd3p@chr6:128438012..128438027, -
1.39e-62FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_b0d07054867326886be01dc7c7a9fdd3p1@Serpina1b
1.39e-62FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_b0d07054867326886be01dc7c7a9fdd3p@chr3:82847318..82847329, -
1.39e-62FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_b0d07054867326886be01dc7c7a9fdd3p1@Serpina1b
1.39e-62FFCP PHASE1:Mm9::chr3:82847318..82847329,-#_b0d07054867326886be01dc7c7a9fdd3p@chr3:82847318..82847329, -
1.39e-62FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_b0d07054867326886be01dc7c7a9fdd3p@chr12:105002005..105002050, -

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