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|def="A bone that is part of a cranium." [UBERON:automatic]
|def="A bone that is part of a cranium." [UBERON:automatic]
|xref=SCTID:181792001
|xref=SCTID:181792001
|is_a=UBERON:0000032;;UBERON:0003457
|is_a=UBERON:0003457
|synonym="cranium bone" EXACT [UBERON:automatic]
|synonym="cranium bone" EXACT [UBERON:automatic]
|comment=
|comment=Note that here cranium = skull - mandible
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0003128
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:cranial bone
Definition:"A bone that is part of a cranium." [UBERON:automatic]
Xrefs:
links:
SCTID:181792001
Synonyms: "cranium bone" EXACT [UBERON:automatic]
Comments:Note that here cranium = skull - mandible

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003457(head bone)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004766 (cranial bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_393437a447275ec45333ee35d832e41dp2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_393437a447275ec45333ee35d832e41dp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_393437a447275ec45333ee35d832e41dp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_393437a447275ec45333ee35d832e41dp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_393437a447275ec45333ee35d832e41dp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_393437a447275ec45333ee35d832e41dp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_393437a447275ec45333ee35d832e41dp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_393437a447275ec45333ee35d832e41dp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_393437a447275ec45333ee35d832e41dp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_393437a447275ec45333ee35d832e41dp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_393437a447275ec45333ee35d832e41dp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_393437a447275ec45333ee35d832e41dp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_393437a447275ec45333ee35d832e41dp1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_393437a447275ec45333ee35d832e41dp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_393437a447275ec45333ee35d832e41dp2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_393437a447275ec45333ee35d832e41dp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_393437a447275ec45333ee35d832e41dp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_393437a447275ec45333ee35d832e41dp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_393437a447275ec45333ee35d832e41dp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_393437a447275ec45333ee35d832e41dp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_393437a447275ec45333ee35d832e41dp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_393437a447275ec45333ee35d832e41dp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_393437a447275ec45333ee35d832e41dp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_393437a447275ec45333ee35d832e41dp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_393437a447275ec45333ee35d832e41dp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_393437a447275ec45333ee35d832e41dp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_393437a447275ec45333ee35d832e41dp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_393437a447275ec45333ee35d832e41dp15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_393437a447275ec45333ee35d832e41dp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_393437a447275ec45333ee35d832e41dp1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_393437a447275ec45333ee35d832e41dp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_393437a447275ec45333ee35d832e41dp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_393437a447275ec45333ee35d832e41dp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_393437a447275ec45333ee35d832e41dp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_393437a447275ec45333ee35d832e41dp13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_393437a447275ec45333ee35d832e41dp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_393437a447275ec45333ee35d832e41dp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_393437a447275ec45333ee35d832e41dp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_393437a447275ec45333ee35d832e41dp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_393437a447275ec45333ee35d832e41dp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_393437a447275ec45333ee35d832e41dp1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_393437a447275ec45333ee35d832e41dp4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_393437a447275ec45333ee35d832e41dp12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_393437a447275ec45333ee35d832e41dp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_393437a447275ec45333ee35d832e41dp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_393437a447275ec45333ee35d832e41dp1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_393437a447275ec45333ee35d832e41dp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_393437a447275ec45333ee35d832e41dp1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_393437a447275ec45333ee35d832e41dp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_393437a447275ec45333ee35d832e41dp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_393437a447275ec45333ee35d832e41dp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_393437a447275ec45333ee35d832e41dp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_393437a447275ec45333ee35d832e41dp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_393437a447275ec45333ee35d832e41dp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_393437a447275ec45333ee35d832e41dp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_393437a447275ec45333ee35d832e41dp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_393437a447275ec45333ee35d832e41dp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_393437a447275ec45333ee35d832e41dp3@Fanca
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_393437a447275ec45333ee35d832e41dp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_393437a447275ec45333ee35d832e41dp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_393437a447275ec45333ee35d832e41dp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_393437a447275ec45333ee35d832e41dp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_393437a447275ec45333ee35d832e41dp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_393437a447275ec45333ee35d832e41dp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_393437a447275ec45333ee35d832e41dp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_393437a447275ec45333ee35d832e41dp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_393437a447275ec45333ee35d832e41dp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_393437a447275ec45333ee35d832e41dp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_393437a447275ec45333ee35d832e41dp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_393437a447275ec45333ee35d832e41dp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_393437a447275ec45333ee35d832e41dp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_393437a447275ec45333ee35d832e41dp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_393437a447275ec45333ee35d832e41dp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_393437a447275ec45333ee35d832e41dp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_393437a447275ec45333ee35d832e41dp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_393437a447275ec45333ee35d832e41dp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_393437a447275ec45333ee35d832e41dp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_393437a447275ec45333ee35d832e41dp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_393437a447275ec45333ee35d832e41dp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_393437a447275ec45333ee35d832e41dp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_393437a447275ec45333ee35d832e41dp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_393437a447275ec45333ee35d832e41dp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_393437a447275ec45333ee35d832e41dp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_393437a447275ec45333ee35d832e41dp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_393437a447275ec45333ee35d832e41dp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_393437a447275ec45333ee35d832e41dp3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_393437a447275ec45333ee35d832e41dp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_393437a447275ec45333ee35d832e41dp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_393437a447275ec45333ee35d832e41dp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_393437a447275ec45333ee35d832e41dp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_393437a447275ec45333ee35d832e41dp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_393437a447275ec45333ee35d832e41dp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_393437a447275ec45333ee35d832e41dp9@Otof
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_393437a447275ec45333ee35d832e41dp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_393437a447275ec45333ee35d832e41dp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_393437a447275ec45333ee35d832e41dp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_393437a447275ec45333ee35d832e41dp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_393437a447275ec45333ee35d832e41dp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_393437a447275ec45333ee35d832e41dp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_393437a447275ec45333ee35d832e41dp@chr14:63099970..63099980, -

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