UBERON:0006555: Difference between revisions
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|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:07, 26 June 2012
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24865194..24865204, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280199..50280211, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:61976287..61976297, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Atp4a |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773580..110773589, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:113585667..113585673, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51734060..51734066,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379159..21379162, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21385325..21385329, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:96014490..96014496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Alpl |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p6@Rnase12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:34107586..34107593, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378296..21378303, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:83143938..83143953, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845349..59845371,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:72756032..72756041, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26611214..26611227, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89596972..89596981, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm3428 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:53955299..53955306, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:16664775..16664784, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20422498..20422506,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20422498..20422506, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p17@Capn5 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:164787162..164787188, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:46041606..46041640,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:46041606..46041640, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:40010825..40010844, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21381141..21381155, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379159..21379162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:77645280..77645295, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349414..25349424,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221034..73221051, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712744..52712754, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26704579..26704582, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:160573065..160573077, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:69143309..69143319,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69143309..69143319, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:52101299..52101305, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597818..89597827, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44261480..44261486, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p9@Tecta |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:67453354..67453365, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611303..63611312, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Wfdc11 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:75293847..75293851, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17585885..17585901, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:49817766..49817772, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378927..21378932, - |
