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{{UBERON
{{UBERON
|id=UBERON:0009617
|id=UBERON:0009617
|name=head paraxial mesenchyme
|name=head paraxial mesoderm
|namespace=
|namespace=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|xref=EHDAA:364;;EHDAA2:0000736;;EMAPA:16171
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
|is_a=UBERON:0003104;;UBERON:0005256;;UBERON:0005291
|is_a=UBERON:0003104;;UBERON:0004120;;UBERON:0005291
|synonym="cephalic paraxial mesenchyme" EXACT [UBERON:cjm];;"cephalic paraxial mesoderm" EXACT [UBERON:cjm]
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|comment=
|comment=
|alt_id=
|alt_id=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0003077;;UBERON:0005253
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:08, 26 June 2012

Name:head paraxial mesoderm
Definition:"Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
Xrefs:
links:

EHDAA2:0000736
EHDAA:364

EMAPA:16171
Synonyms: "cephalic paraxial mesoderm" EXACT [UBERON:cjm]
"head paraxial mesenchyme" EXACT [EHDAA2:0000736]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003104(mesenchyme),UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue)



Children

develops from:UBERON:0004761 (cartilaginous neurocranium),UBERON:0007647 (ectomeninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009617 (head paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_c6d67655ae3e8e9acffeefba96516e6ap7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_c6d67655ae3e8e9acffeefba96516e6ap11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c6d67655ae3e8e9acffeefba96516e6ap11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_c6d67655ae3e8e9acffeefba96516e6ap5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140800..154140810, +
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c6d67655ae3e8e9acffeefba96516e6ap41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_c6d67655ae3e8e9acffeefba96516e6ap7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_c6d67655ae3e8e9acffeefba96516e6ap5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207697..42207705, -
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_c6d67655ae3e8e9acffeefba96516e6ap10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Otog
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_c6d67655ae3e8e9acffeefba96516e6ap9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_c6d67655ae3e8e9acffeefba96516e6ap5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c6d67655ae3e8e9acffeefba96516e6ap7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c6d67655ae3e8e9acffeefba96516e6ap9@Otof
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_c6d67655ae3e8e9acffeefba96516e6ap11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c6d67655ae3e8e9acffeefba96516e6ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Strc
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_c6d67655ae3e8e9acffeefba96516e6ap5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_c6d67655ae3e8e9acffeefba96516e6ap6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_c6d67655ae3e8e9acffeefba96516e6ap9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c6d67655ae3e8e9acffeefba96516e6ap2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699188..43699216, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_c6d67655ae3e8e9acffeefba96516e6ap21@Espn
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_c6d67655ae3e8e9acffeefba96516e6ap10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_c6d67655ae3e8e9acffeefba96516e6ap13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_c6d67655ae3e8e9acffeefba96516e6ap4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:65641779..65641790, +

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