Personal tools

CL:0002562: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 5: Line 5:
|def="An epidermal cell that is part of the germinal matrix." [GOC:tfm]
|def="An epidermal cell that is part of the germinal matrix." [GOC:tfm]
|xref=
|xref=
|is_a=CL:0000362
|is_a=CL:0000362;;CL:0002559
|synonym="trichocyte" EXACT []
|synonym="trichocyte" EXACT []
|comment=
|comment=
Line 14: Line 14:
|obo_creation_date=2011-03-01T04:31:06Z
|obo_creation_date=2011-03-01T04:31:06Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
Line 20: Line 19:
|located_in=
|located_in=
|part_of=UBERON:0006004
|part_of=UBERON:0006004
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Latest revision as of 13:04, 27 June 2012

Name:hair germinal matrix cell
Namespace:cell
Definition:"An epidermal cell that is part of the germinal matrix." [GOC:tfm]
Synonyms: "trichocyte" EXACT []
Created by:tmeehan
Creation date:2011-03-01T04:31:06Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000362(epidermal cell),CL:0002559(hair follicle cell)
part_of:UBERON:0006004(hair follicle matrix region)



Children


is a:FF:0000073 (hair follicle germinal matrix cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002562 (hair germinal matrix cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster