Personal tools

UBERON:0010092: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0002028
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 13:45, 27 June 2012

Name:future metencephalon
Xrefs:
links:
EHDAA2:0000623

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002616(regional part of brain),UBERON:0005423(developing anatomical structure)
part_of:UBERON:0002028(hindbrain)



Children

develops from:UBERON:0001895 (metencephalon)
part of:UBERON:0006215 (rhombic lip)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010092 (future metencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.91e-91FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_a4729222eee609eae71932f5eb9250f8p17@BDNF
4.91e-91FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_a4729222eee609eae71932f5eb9250f8p17@BDNF
1.37e-87FFCP PHASE1:Hg19::chr6:72922728..72922737,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp29@RIMS1
1.37e-87FFCP PHASE2:Hg19::chr17:72667462..72667471,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp11@RAB37
1.37e-87FFCP PHASE1:Hg19::chr9:135538143..135538152,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp2@CU680380
1.37e-87FFCP PHASE2:Hg19::chr6:72922728..72922737,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp29@RIMS1
1.37e-87FFCP PHASE1:Hg19::chr17:72667462..72667471,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp11@RAB37
1.37e-87FFCP PHASE2:Hg19::chr11:123448159..123448170,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp4@AB384137
1.37e-87FFCP PHASE1:Hg19::chr15:79724672..79724683,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp1@KIAA1024
1.37e-87FFCP PHASE1:Hg19::chr11:123448159..123448170,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp4@AB384137
1.37e-87FFCP PHASE2:Hg19::chr9:135538143..135538152,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp2@CU680380
1.37e-87FFCP PHASE1:Hg19::chr17:72857611..72857619,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp@chr17:72857611..72857619, -
1.37e-87FFCP PHASE2:Hg19::chr17:50236110..50236119,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp22@CA10
1.37e-87FFCP PHASE2:Hg19::chr15:79724672..79724683,+#_bbf1935a59541ffa4dbf1fd9fcc1d95cp1@KIAA1024
1.37e-87FFCP PHASE2:Hg19::chr17:72857611..72857619,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp@chr17:72857611..72857619, -
1.37e-87FFCP PHASE1:Hg19::chr17:50236110..50236119,-#_bbf1935a59541ffa4dbf1fd9fcc1d95cp22@CA10
3.19e-78FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_ca3e72ec76eb4ae98c15875368d87c7dp3@CRTAM
3.19e-78FFCP PHASE2:Hg19::chr5:20575610..20575619,-#_ca3e72ec76eb4ae98c15875368d87c7dp11@CDH18
3.19e-78FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_ca3e72ec76eb4ae98c15875368d87c7dp3@CRTAM
3.19e-78FFCP PHASE1:Hg19::chr5:20575610..20575619,-#_ca3e72ec76eb4ae98c15875368d87c7dp11@CDH18
2.16e-70FFCP PHASE2:Hg19::chr9:135457457..135457468,+#_010805bc0f52bf9a20a4ae972eb7ec46p4@BARHL1
2.16e-70FFCP PHASE1:Hg19::chr9:135457457..135457468,+#_010805bc0f52bf9a20a4ae972eb7ec46p4@BARHL1
2.58e-70FFCP PHASE1:Hg19::chr17:72667518..72667529,+#_364b834cdd32857348164e4a3b462954p8@RAB37
2.58e-70FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_364b834cdd32857348164e4a3b462954p@chr4:117873850..117873861, -
2.58e-70FFCP PHASE2:Hg19::chr20:30616906..30616921,-#_364b834cdd32857348164e4a3b462954p@chr20:30616906..30616921, -
2.58e-70FFCP PHASE1:Hg19::chr1:159842835..159842846,-#_364b834cdd32857348164e4a3b462954p1@ENST00000536764
2.58e-70FFCP PHASE2:Hg19::chr1:159842835..159842846,-#_364b834cdd32857348164e4a3b462954p1@ENST00000536764
2.58e-70FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_364b834cdd32857348164e4a3b462954p@chr4:117873850..117873861, -
2.58e-70FFCP PHASE2:Hg19::chr17:72667518..72667529,+#_364b834cdd32857348164e4a3b462954p8@RAB37
2.58e-70FFCP PHASE1:Hg19::chr20:30616906..30616921,-#_364b834cdd32857348164e4a3b462954p@chr20:30616906..30616921, -
3.09e-70FFCP PHASE1:Hg19::chr20:62795787..62795793,+#_a6f79c2dfafcdd5421d77a8691e0e070p8@MYT1
3.09e-70FFCP PHASE1:Hg19::chr17:50235999..50236008,-#_a6f79c2dfafcdd5421d77a8691e0e070p21@CA10
3.09e-70FFCP PHASE2:Hg19::chr17:50235999..50236008,-#_a6f79c2dfafcdd5421d77a8691e0e070p21@CA10
3.09e-70FFCP PHASE2:Hg19::chr20:62795787..62795793,+#_a6f79c2dfafcdd5421d77a8691e0e070p8@MYT1
9.93e-69FFCP PHASE1:Hg19::chr22:26565113..26565124,+#_96834168a8e5022280a567c835c3f770p7@SEZ6L
9.93e-69FFCP PHASE2:Hg19::chr22:26565113..26565124,+#_96834168a8e5022280a567c835c3f770p7@SEZ6L
3.04e-66FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_632f59ec54d57211d6864bea2eb2b108p@chr2:72381655..72381673, -
3.04e-66FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_632f59ec54d57211d6864bea2eb2b108p@chr2:72381655..72381673, -
3.75e-66FFCP PHASE1:Hg19::chr11:64146203..64146207,+#_57214f6b2a254ea623d8335319537046p@chr11:64146203..64146207, +
3.75e-66FFCP PHASE1:Hg19::chr11:108438755..108438763,-#_57214f6b2a254ea623d8335319537046p20@EXPH5
3.75e-66FFCP PHASE1:Hg19::chr1:24526024..24526028,+#_57214f6b2a254ea623d8335319537046p@chr1:24526024..24526028, +
3.75e-66FFCP PHASE1:Hg19::chr12:72667119..72667130,+#_57214f6b2a254ea623d8335319537046p16@TRHDE
3.75e-66FFCP PHASE1:Hg19::chr1:206611115..206611119,+#_57214f6b2a254ea623d8335319537046p@chr1:206611115..206611119, +
3.75e-66FFCP PHASE1:Hg19::chr11:122733093..122733100,+#_57214f6b2a254ea623d8335319537046p8@CRTAM
3.75e-66FFCP PHASE1:Hg19::chr13:100633194..100633202,+#_57214f6b2a254ea623d8335319537046p6@AK298232
3.75e-66FFCP PHASE1:Hg19::chr14:79746650..79746659,+#_57214f6b2a254ea623d8335319537046p23@NRXN3
3.75e-66FFCP PHASE1:Hg19::chr16:3656599..3656608,-#_57214f6b2a254ea623d8335319537046p@chr16:3656599..3656608, -
3.75e-66FFCP PHASE1:Hg19::chr19:6501233..6501243,-#_57214f6b2a254ea623d8335319537046p@chr19:6501233..6501243, -
3.75e-66FFCP PHASE1:Hg19::chr1:2241890..2241895,-#_57214f6b2a254ea623d8335319537046p@chr1:2241890..2241895, -
3.75e-66FFCP PHASE1:Hg19::chr1:228602576..228602587,-#_57214f6b2a254ea623d8335319537046p1@CU689740
3.75e-66FFCP PHASE1:Hg19::chr16:49357829..49357832,+#_57214f6b2a254ea623d8335319537046p@chr16:49357829..49357832, +
3.75e-66FFCP PHASE1:Hg19::chr20:45062007..45062020,+#_57214f6b2a254ea623d8335319537046p7@AK054905
3.75e-66FFCP PHASE1:Hg19::chr14:77582887..77582896,+#_57214f6b2a254ea623d8335319537046p12@TMEM63C
3.75e-66FFCP PHASE1:Hg19::chr11:133821982..133821993,-#_57214f6b2a254ea623d8335319537046p@chr11:133821982..133821993, -
3.75e-66FFCP PHASE1:Hg19::chr21:47268058..47268079,+#_57214f6b2a254ea623d8335319537046p5@PCBP3
3.75e-66FFCP PHASE1:Hg19::chr11:133902562..133902580,+#_57214f6b2a254ea623d8335319537046p1@ENST00000529070
3.75e-66FFCP PHASE1:Hg19::chr17:48545700..48545707,+#_57214f6b2a254ea623d8335319537046p5@ACSF2
3.75e-66FFCP PHASE1:Hg19::chr17:39553443..39553452,-#_57214f6b2a254ea623d8335319537046p2@KRT31
3.75e-66FFCP PHASE1:Hg19::chr17:72673771..72673779,-#_57214f6b2a254ea623d8335319537046p@chr17:72673771..72673779, -
3.75e-66FFCP PHASE1:Hg19::chr1:1953233..1953242,-#_57214f6b2a254ea623d8335319537046p@chr1:1953233..1953242, -
3.75e-66FFCP PHASE1:Hg19::chr16:23419354..23419361,+#_57214f6b2a254ea623d8335319537046p@chr16:23419354..23419361, +
3.75e-66FFCP PHASE1:Hg19::chr10:71562284..71562291,+#_57214f6b2a254ea623d8335319537046p14@COL13A1
3.75e-66FFCP PHASE1:Hg19::chr18:8783620..8783627,+#_57214f6b2a254ea623d8335319537046p@chr18:8783620..8783627, +
3.75e-66FFCP PHASE1:Hg19::chr17:72667207..72667214,+#_57214f6b2a254ea623d8335319537046p12@RAB37
3.75e-66FFCP PHASE1:Hg19::chr16:3656616..3656628,-#_57214f6b2a254ea623d8335319537046p@chr16:3656616..3656628, -
3.75e-66FFCP PHASE1:Hg19::chr21:47314143..47314154,-#_57214f6b2a254ea623d8335319537046p@chr21:47314143..47314154, -
3.75e-66FFCP PHASE1:Hg19::chr11:123396575..123396583,+#_57214f6b2a254ea623d8335319537046p9@GRAMD1B
3.75e-66FFCP PHASE1:Hg19::chr13:42792979..42793012,+#_57214f6b2a254ea623d8335319537046p@chr13:42792979..42793012, +
3.75e-66FFCP PHASE1:Hg19::chr17:72667483..72667484,+#_57214f6b2a254ea623d8335319537046p18@RAB37
3.75e-66FFCP PHASE1:Hg19::chr1:59775752..59775763,+#_57214f6b2a254ea623d8335319537046p19@FGGY
3.75e-66FFCP PHASE1:Hg19::chr16:608967..608994,+#_57214f6b2a254ea623d8335319537046p@chr16:608967..608994, +
3.75e-66FFCP PHASE1:Hg19::chr20:30616884..30616898,-#_57214f6b2a254ea623d8335319537046p@chr20:30616884..30616898, -
3.75e-66FFCP PHASE1:Hg19::chr22:17891551..17891560,+#_57214f6b2a254ea623d8335319537046p@chr22:17891551..17891560, +
3.75e-66FFCP PHASE1:Hg19::chr19:17992758..17992791,+#_57214f6b2a254ea623d8335319537046p@chr19:17992758..17992791, +
3.75e-66FFCP PHASE1:Hg19::chr10:122216316..122216327,+#_57214f6b2a254ea623d8335319537046p5@PPAPDC1A
3.75e-66FFCP PHASE1:Hg19::chr14:60048980..60048989,-#_57214f6b2a254ea623d8335319537046p@chr14:60048980..60048989, -
3.75e-66FFCP PHASE1:Hg19::chr15:81489344..81489353,+#_57214f6b2a254ea623d8335319537046p31@IL16
3.75e-66FFCP PHASE1:Hg19::chr16:87376991..87377002,-#_57214f6b2a254ea623d8335319537046p@chr16:87376991..87377002, -
3.75e-66FFCP PHASE1:Hg19::chr11:65999312..65999320,+#_57214f6b2a254ea623d8335319537046p30@PACS1
3.75e-66FFCP PHASE1:Hg19::chr21:32624498..32624505,-#_57214f6b2a254ea623d8335319537046p@chr21:32624498..32624505, -
3.75e-66FFCP PHASE1:Hg19::chr16:87377029..87377039,-#_57214f6b2a254ea623d8335319537046p@chr16:87377029..87377039, -
3.75e-66FFCP PHASE1:Hg19::chr17:588406..588409,-#_57214f6b2a254ea623d8335319537046p@chr17:588406..588409, -
3.75e-66FFCP PHASE1:Hg19::chr20:45062215..45062225,+#_57214f6b2a254ea623d8335319537046p4@AK054905
3.75e-66FFCP PHASE1:Hg19::chr1:46639505..46639517,+#_57214f6b2a254ea623d8335319537046p@chr1:46639505..46639517, +
3.75e-66FFCP PHASE1:Hg19::chr20:45062029..45062044,+#_57214f6b2a254ea623d8335319537046p6@AK054905
3.75e-66FFCP PHASE1:Hg19::chr1:190445111..190445122,-#_57214f6b2a254ea623d8335319537046p15@FAM5C
3.75e-66FFCP PHASE1:Hg19::chr1:244355163..244355179,+#_57214f6b2a254ea623d8335319537046p@chr1:244355163..244355179, +
3.75e-66FFCP PHASE1:Hg19::chr20:45061929..45061936,+#_57214f6b2a254ea623d8335319537046p8@AK054905
3.75e-66FFCP PHASE1:Hg19::chr16:612039..612048,-#_57214f6b2a254ea623d8335319537046p@chr16:612039..612048, -
3.75e-66FFCP PHASE1:Hg19::chr13:100633107..100633110,+#_57214f6b2a254ea623d8335319537046p7@AK298232
3.75e-66FFCP PHASE1:Hg19::chr14:24898354..24898366,-#_57214f6b2a254ea623d8335319537046p8@CBLN3
3.75e-66FFCP PHASE1:Hg19::chr18:66918040..66918047,-#_57214f6b2a254ea623d8335319537046p@chr18:66918040..66918047, -
3.75e-66FFCP PHASE1:Hg19::chr20:45062290..45062300,+#_57214f6b2a254ea623d8335319537046p3@AK054905
3.75e-66FFCP PHASE1:Hg19::chr1:244355180..244355201,+#_57214f6b2a254ea623d8335319537046p@chr1:244355180..244355201, +
3.75e-66FFCP PHASE1:Hg19::chr11:104480062..104480069,-#_57214f6b2a254ea623d8335319537046p3@ENST00000538641
3.75e-66FFCP PHASE1:Hg19::chr12:78430875..78430887,+#_57214f6b2a254ea623d8335319537046p1@AB384547
3.75e-66FFCP PHASE1:Hg19::chr14:77582934..77582947,+#_57214f6b2a254ea623d8335319537046p9@TMEM63C
3.75e-66FFCP PHASE1:Hg19::chr18:39687774..39687782,+#_57214f6b2a254ea623d8335319537046p@chr18:39687774..39687782, +
3.75e-66FFCP PHASE1:Hg19::chr20:45061641..45061646,-#_57214f6b2a254ea623d8335319537046p13@ELMO2
3.75e-66FFCP PHASE1:Hg19::chr1:106499338..106499354,+#_57214f6b2a254ea623d8335319537046p@chr1:106499338..106499354, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010092&oldid=1838098"