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<html>
<html>
<style type="text/css" title="currentStyle">
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/flot/jquery.flot.min.js"></script>
 
<style type="text/css" title="currentStyle">
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
.rotate90 {
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css";
  -webkit-transform: rotate(-90deg);
.highlight { background-color: yellow }
  -moz-transform: rotate(-90deg); 
  filter: progid:DXImageTransform.Microsoft.BasicImage(rotation=3);
overflow: hidden;
}
.rotate90container {
margin-left: 3px;
 
}
</style>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/flot/jquery.flot.min.js"></script>
<script type="text/javascript" charset="utf-8">
/* Data set - can contain whatever information you want */
var aDataSet = [
['sample2','2.509','10.233','4'],
['sample1','0.23','5.32','5'],
['sample3','3.234','16','5.5'],
['sample4','1.236','4.542','6'],
['sample5','7.9967','8.67','7']
];  
/*
    // produce colors as needed
            var colors = [], variation = 0;
            i = 0;
                var c;
                if (options.colors.length == i) // check degenerate case
                    c = $.color.make(100, 100, 100);
                else
                    c = $.color.parse(options.colors[i]);


                // vary color if needed
</style>
                var sign = variation % 2 == 1 ? -1 : 1;
<script type="text/javascript">
                c.scale('rgb', 1 + sign * Math.ceil(variation / 2) * 0.2)


                // FIXME: if we're getting to close to something else,
                // we should probably skip this one
                colors.push(c);
               
                ++i;
                if (i >= options.colors.length) {
                    i = 0;
                    ++variation;
                }
            */
           
$(document).ready(function() {
$(document).ready(function() {
$('#dynamic').html( "<table cellpadding=0 cellspacing=0 border=0 class='display' id='example'></table>" );
    var oTable =  $('.ffcp_explist').dataTable({
var otable = $('#example').dataTable( {
// "bPaginate": false,
"aaData": aDataSet,
"sScrollY": "300px",
"bScrollCollapse": true,
"iDisplayLength": -1,
"aLengthMenu": [[10, 25, 100, -1], [10, 25, 100, "All"]],
"aoColumnDefs": [ { "asSorting": [ "desc", "asc" ], "aTargets": [ "_all" ] } , { "bSortable": false, "aTargets": [ 0 ] }],
"aaSorting": [[ 1, "desc" ]]
});


"aoColumns": [
var oTableTools = new TableTools( oTable, {"sSwfPath": "/resource_browser/rb_js/datatables/extras/TableTools/media/swf/copy_csv_xls_pdf.swf", "aButtons": [ {"sExtends": "copy", "mColumns": "visible"}, {"sExtends": "csv", "mColumns": "visible"}, {"sExtends": "pdf", "mColumns": "visible"} ]});
{ "sTitle": "samples" },
{ "sTitle": "gene1" },
{ "sTitle": "gene2" },
{ "sTitle": "gene3" },
]
} );


function drawchart(){
$('#export_tool').before( oTableTools.dom.container );
var v2 = $("#dynamic tr")[3].cells[1];


/* collect sample */
function drawchart(){
var sname = [];
for (var i1=1; i1<$('#dynamic tr').length; i1++) {
sname.push([$("#dynamic tr")[i1].cells[0].innerHTML]);
}


/* collect data */
/* collect data */
var data = [];
var data = [];
for (var i2=1; i2<$("#dynamic tr")[0].cells.length; i2++){
for (var i2=1; i2<$("#explist tr")[0].cells.length; i2++){
var plots = [];
var plots = [];
for (var i1=1; i1<$('#dynamic tr').length; i1++) {
for (var i1=1; i1<$('#explist tr').length; i1++) {
plots.push([i1,$("#dynamic tr")[i1].cells[i2].innerHTML]);
    //plots.push([i1,$("#explist tr")[i1].cells[i2].innerHTML]);
}
    plots[plots.length] = [i1,$("#explist tr")[i1].cells[i2].innerHTML];
data.push({"label": $("#dynamic tr")[0].cells[i2].innerHTML, "data": plots});
}
//data.push({"label": $('.dataTables_scrollHeadInner tr')[0].cells[i2].innerText, "data": plots});
data[data.length] = {"label": $('.dataTables_scrollHeadInner tr')[0].cells[i2].innerText, "data": plots};
}
}


var options = {
lines : {
show : true
},
points : {
show : true
},
xaxis : {
tickDecimals : 0,
tickSize : 1
}
};


$('#testv01').text("data: "+sname[1]);


var placeholder = $("#placeholder");
var plot1 = $.plot($("#placeholder"), data, {
                yaxis : { axisLabel : 'TPM' },
lines : { show : false },
points : { show : true },
                grid: { hoverable: true, clickable: true },
xaxis : { tickDecimals : 0, show: false },
                legend: { show: false}
      });
 
}
 
drawchart();
 
 
// re-draw chart event
$("th").click(function() { drawchart(); } );
$('.ffcp_explist').bind('page', function() { drawchart(); } );
$('.ffcp_explist').bind('filter', function() { drawchart(); } );
$('#explist_length').change(function() { drawchart(); } );


$.plot(placeholder, data, options);


}
// tooltip function start
    function showTooltip(x, y, contents) {
        $('<div id="tooltip">' + contents + '</div>').css( {
            position: 'absolute',
            display: 'none',
            top: y + 5,
            left: x + 5,
            border: '1px solid #aaa',
            padding: '2px',
            'background-color': '#fff',
            opacity: 0.80
        }).appendTo("body").fadeIn(200);
    }


drawchart();
    var previousPoint = null;
$("th").click(function() {
    $("#placeholder").bind("plothover", function (event, pos, item) {
drawchart();
        $("#x").text(pos.x.toFixed(2));
        $("#y").text(pos.y.toFixed(2));
            if (item) {
                if (previousPoint != item.dataIndex) {
                    previousPoint = item.dataIndex;
                   
                    $("#tooltip").remove();
                    var x = item.datapoint[0].toFixed(0),
                        y = item.datapoint[1].toFixed(2);


} );
//var smplname = $('#explist_wrapper .dataTables_scrollBody tbody tr')[item.dataIndex].cells[0].innerText;
});
var smplname = oTable._('tr:eq(' + item.dataIndex + ')')[0][0];
var desc = "TPM: "+y;
if(smplname){
desc = "Sample: " + smplname + "<br>" + desc;
}
           
                    showTooltip(item.pageX, item.pageY, desc);
                }
            }
            else {
                $("#tooltip").remove();
                previousPoint = null;           
            }
    });
// tooltip function end


</script>
// clicking point function
    $("#placeholder").bind("plotclick", function (event, pos, item) {
if (item){
var vdata = Math.round($('#explist').height())/item.series.data.length*item.dataIndex;


$('#explist_wrapper .dataTables_scrollBody').animate({ scrollTop: vdata-150 }, 'slow');
//$('#test').text(vdata);


<div id="dynamic"></div>
$("#explist_wrapper .dataTables_scrollBody tbody td").removeClass('highlight');
<div class="spacer"></div>
$('#explist_wrapper .dataTables_scrollBody tbody tr:eq(' + item.dataIndex+ ') td').addClass('highlight');
<div id="testv01"></div>
}
<h1>Flot Examples</h1>
    });
<div id="placeholder" style="width:100%;height:300px;"></div>
// clicking point function end
 
//test
var t1 = oTable.fnSettings().aoColumns[1];
$('#test2').text(t1.sTitle);
//$('#test2').text("yes");
} );
</script>
</html>
</html>


<span id="export_tool"></span>
<table class="ffcp_explist" id="explist"><html><thead></html>
<tr>
<th scope="col">sample</th>
<th scope="col">TPM value</th>
</tr><html></thead><tbody></html>
{{#exptable_hg19:
0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.27438136522519,2.49322802678617,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.14950798265875,0,0,0,0,0,0,0,0,0,1.02418136999391,0.576911008668165,1.28066733322951,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56630256826494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
}}
<html></tbody></html></table>
<br><br>
<html>
<html>
<table class="entrezene_explist" id="dynamic"><thead>
<div id="placeholder" style="width:100%;height:300px;"></div>
<tr>
<div id="test2"></div>
<th>sample</th>
<th height="50"><div class="rotate90container"><div  class="rotate90">
<input type="checkbox" checked><a href="/resource_browser/index.php/FFCP_PHASE1:Hg19::chr8:18248756..18248767,%2B" title="FFCP PHASE1:Hg19::chr8:18248756..18248767,+">p2@NAT2</a></div></div></th><th><input type="checkbox" checked><a href="/resource_browser/index.php/FFCP_PHASE1:Hg19::chr8:18248786..18248805,%2B" title="FFCP PHASE1:Hg19::chr8:18248786..18248805,+">p1@NAT2</a>
</th>
</tr></thead><tbody>
<tr><td><a href="/resource_browser/index.php/FF:11376-118A8" title="FF:11376-118A8">tpm.Adipocyte - breast, donor1.CNhs11051.11376-118A8</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td></tr><tr><td><a href="/resource_browser/index.php/FF:11327-117E4" title="FF:11327-117E4">tpm.Adipocyte - breast, donor2.CNhs11969.11327-117E4</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,4,0);color: white">0.21</td></tr><tr><td><a href="/resource_browser/index.php/FF:11473-119C6" title="FF:11473-119C6">tpm.Adipocyte - omental, donor1.CNhs11054.11473-119C6</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,2,0);color: white">0.14</td></tr><tr><td><a href="/resource_browser/index.php/FF:11474-119C7" title="FF:11474-119C7">tpm.Adipocyte - omental, donor2.CNhs12067.11474-119C7</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td></tr><tr><td><a href="/resource_browser/index.php/FF:11475-119C8" title="FF:11475-119C8">tpm.Adipocyte - omental, donor3.CNhs12068.11475-119C8</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td></tr><tr><td><a href="/resource_browser/index.php/FF:11476-119C9" title="FF:11476-119C9">tpm.Adipocyte - perirenal, donor1.CNhs12069.11476-119C9</a></td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td><td style="text-align: center; background-color: rgb(0,0,0);color: white">0.00</td></tr>
</tbody>
</table>
</html>
</html>

Latest revision as of 12:19, 27 July 2012

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sample TPM value



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