FFCP PHASE1:Hg19::chr12:57624059..57624066,+: Difference between revisions
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|description=CAGE_peak_34_at_SHMT2_5end | |description=CAGE_peak_34_at_SHMT2_5end | ||
|id=chr12:57624059..57624066,+ | |id=chr12:57624059..57624066,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002550;5.05e-34;1!CL:0002363;9.07e-18;2!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6 | ||
|ontology_enrichment_development=CL:0000008;9.07e-18;2!CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0003891;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4 | |||
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| ||
|short_description=p34@SHMT2 | |short_description=p34@SHMT2 | ||
}} | }} |
Revision as of 08:47, 2 August 2012
Short description: | p34@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_SHMT2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 0bp_to_ENST00000557427_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | G3V4X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.