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MacroAPE 1083:Motif ANCTGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;5664;0;0;0!02;1416;1416;1416;1416!03;0;5664;0;0!04;0;0;0;5664!05;0;0;5664;0!06;0;0;0;5664 |macroape_1083_sample_pvalues=11376-118A8;0.1656...")
 
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29901!10789-110H6;0.465483!10828-111C9;0.224201!10788-110H5;0.15205!10792-110H9;0.128941!10765-110E9;0.441694!10829-111D1;0.086922!10830-111D2;0.0982372!10831-111D3;0.38995!10832-111D4;0.186229!10833-111D5;0.227501!10764-110E8;0.275899!10770-110F5;0.0953396!10399-106A3;0.284165!10400-106A4;0.174231!10405-106A9;0.178088!10834-111D6;0.160415!10835-111D7;0.0818805!10836-111D8;0.261934!10837-111D9;0.0945889!10699-109G6;0.230364!10802-111A1;0.13879!10796-110I4;0.19386!10010-101C1;0.672451!10810-111A9;0.123401!10421-106C7;0.0578787!10708-109H6;0.40015!12235-129G3;0.0179764!12236-129G4;0.00031888!12237-129G5;0.00633621!10167-103B5;0.000152454!10151-102I7;0.19339!10428-106D5;0.158852!10795-110I3;0.187625!10805-111A4;0.129378!10052-101G7;0.212539!10189-103D9;0.0194043!10589-108D4;0.0952938!10425-106D2;0.51322!10427-106D4;0.377471!10702-109G9;0.540526!10432-106D9;0.772673!10496-107C1;0.5144!10718-109I7;0.657312!10011-101C2;0.109573!10053-101G8;0.0213222!10686-109F2;0.639457!10084-102B3;0.0305416!10012-101C3;0.230195!10085-102B4;0.171988!10482-107A5;0.25128!10419-106C5;0.50384!10080-102A8;0.685369!10760-110E4;0.119375!10709-109H7;0.64647!10710-109H8;0.980189!10703-109H1;0.866825!10719-109I8;0.891193!10642-109A3;0.558913!10177-103C6;0.0680219!10164-103B2;0.218823!10173-103C2;0.139953!10166-103B4;0.167106!10083-102B2;0.0880508!10188-103D8;0.074994!10552-107I3;0.1862!10553-107I4;0.172252!10013-101C4;0.579279!10536-107G5;0.0358403!10618-108G6;0.13371!10423-106C9;0.60496!10785-110H2;0.878879!12238-129G6;0.97752!12239-129G7;0.000867454!12240-129G8;0.235027!10416-106C2;0.00519964!10801-110I9;0.414887!10766-110F1;0.0549596!10824-111C5;0.167916!10825-111C6;0.0486202!10826-111C7;0.063999!10454-106G4;0.0488336!10409-106B4;0.0941719!10638-108I8;0.190123!10636-108I6;0.297398!10513-107D9;0.500387!10420-106C6;0.581289!10082-102B1;0.400421!10014-101C5;0.0348888!10070-101I7;0.0060746!10452-106G2;0.0514734!10453-106G3;0.295179!10449-106F8;0.112149!10042-101F6;0.0889596!10069-101I6;0.0955896!10193-103E4;0.0674077!10631-108I1;0.137828!10438-106E6;0.138525!10488-107B2;0.809378!10196-103E7;0.138054!10071-101I8;0.000101935!10071-101I8;0.0586372!10041-101F5;0.46928!10451-106G1;0.38057!10450-106F9;0.298118!10604-108F1;0.121648!10605-108F2;0.161986!10606-108F3;0.180392!10603-108E9;0.147963!10497-107C2;0.0579338!10448-106F7;0.805314!10643-109A4;0.00377702!10426-106D3;0.898536!10431-106D8;0.80609!10197-103E8;0.323075!10443-106F2;0.00634321!10815-111B5;0.122349!10816-111B6;0.155485!10817-111B7;0.174966!10015-101C6;0.148309!10410-106B5;0.00655145!10054-101G9;0.172786!10758-110E2;0.048938!10711-109H9;0.00538514!10040-101F4;0.0228148!10470-106I2;0.164659!10415-106C1;0.443105!10198-103E9;0.596947!10614-108G2;0.0126974!10612-108F9;0.829894!10549-107H9;0.779857!10615-108G3;0.0196418!10487-107B1;0.926895!10433-106E1;0.245136!10688-109F4;0.070795!10444-106F3;0.862972!10444-106F3;0.473476!10485-107A8;0.482739!10413-106B8;0.0120978!10175-103C4;0.125398!10161-103A8;0.195363!12131-128D7;0.170783!10624-108H3;0.560368!10712-109I1;0.0147233!10205-103F7;0.220515!10206-103F8;0.178919!10207-103F9;0.0803261!10050-101G5;0.16271!10051-101G6;0.00324936!10016-101C7;0.0582553!10046-101G1;0.0587913!10778-110G4;0.144567!10633-108I3;0.635071!10818-111B8;0.474004!10819-111B9;0.340759!10820-111C1;0.289171!10484-107A7;0.350417!10808-111A7;0.340191!10169-103B7;0.0593006!10153-102I9;0.159883!13425-144D5;0.143979!13433-144E4;0.303208!13437-144E8;0.399985!11904-125F5;0.463438!11905-125F6;0.994087!10039-101F3;0.811165!10791-110H8;0.160031!10017-101C8;0.804981!10045-101F9;0.0133383!10509-107D5;0.0669893!10839-111E2;0.0791234!10692-109F8;0.559435!10079-102A7;0.754015!10078-102A6;0.153603!10721-110A1;0.0711312!10569-108B2;0.0726176!10570-108B3;0.665343!10571-108B4;0.69168!10647-109A8;0.617763!10752-110D5;0.0177615!10782-110G8;0.128579!10726-110A6;0.0921545!10018-101C9;0.0567881!10086-102B5;0.0511395!10182-103D2;0.270446!10165-103B3;0.276939!10499-107C4;0.135517!10408-106B3;0.181366!10019-101D1;0.982529!10068-101I5;0.0233298!10075-102A3;0.0817493!10077-102A5;0.054603!10727-110A7;0.664073!10775-110G1;0.93273!10412-106B7;0.340525!12231-129F8;0.542911!12232-129F9;0.835891!12233-129G1;0.873605!12234-129G2;0.710321!10414-106B9;0.803368!10170-103B8;0.843971!10183-103D3;0.307087!10150-102I6;0.25215!10174-103C3;0.207303!10155-103A2;0.198433!10038-101F2;0.121006!10838-111E1;0.117445!10759-110E3;0.246419!10514-107E1;0.0876997!10465-106H6;0.299855!10691-109F7;0.297576!10843-111E6;0.57617!10844-111E7;0.696625!11747-123G1;0.339997!11748-123G2;0.246479!11749-123G3;0.144299!11750-123G4;0.843312!11751-123G5;0.844974!11840-124H4;0.916872!11752-123G6;0.251791!11753-123G7;0.928709!11754-123G8;0.306353!11755-123G9;0.101068!11756-123H1;0.110742!11833-124G6;0.184931!11760-123H5;0.450867!11836-124G9;0.390947!11758-123H3;0.469549!11835-124G8;0.944976!11762-123H7;0.75982!11838-124H2;0.979996!11757-123H2;0.624562!11759-123H4;0.956613!11761-123H6;0.0909336!11842-124H6;0.904643!11837-124H1;0.501952!10568-108B1;0.994861!13230-141I8;0.583977!13231-141I9;0.557609!10696-109G3;0.39401!10493-107B7;0.12615!10494-107B8;0.322212!10850-111F4;0.980526!10851-111F5;0.0912638!10852-111F6;0.158199!10853-111F7;0.700876!10854-111F8;0.0346229!10855-111F9;0.370559!10856-111G1;0.801293!10847-111F1;0.399049!10846-111E9;0.0583811!10848-111F2;0.359536!10845-111E8;0.378421!10857-111G2;0.196798!10858-111G3;0.0881364!10156-103A3;0.133507!11901-125F2;0.191194!11902-125F3;0.85224!11903-125F4;0.524125!10689-109F5;0.609085!10648-109A9;0.043253!10784-110H1;0.255421!10744-110C6;0.770629!10772-110F7;0.357357!10474-106I6;0.206701!10600-108E6;0.485747!10684-109E9;0.0290794!12226-129F3;0.0207881!12227-129F4;0.335834!10508-107D4;0.134636!10539-107G8;0.594134!10607-108F4;0.593699!10555-107I6;0.491617!10774-110F9;0.536861!10637-108I7;0.191277!10663-109C6;0.67484!10728-110A8;0.341748!10729-110A9;0.249292!10430-106D7;0.0499367!10730-110B1;0.317116!10813-111B3;0.651014!10812-111B2;0.134512!10037-101F1;0.444413!10172-103C1;0.15868!10163-103B1;0.296833!10076-102A4;0.229295!10073-102A1;0.206758!10036-101E9;0.623223!10195-103E6;0.194986!10277-104E7;0.149166!10434-106E2;0.0376874!10550-107I1;0.547241!10545-107H5;0.51405!10544-107H4;0.865345!10704-109H2;0.943707!10510-107D6;0.121504!10558-107I9;0.0233479!10020-101D2;0.0843944!10732-110B3;0.178848!10049-101G4;0.0941917!10698-109G5;3.38181e-07!10437-106E5;0.717308!10417-106C3;0.210683!10035-101E8;0.620395!10171-103B9;0.179475!10157-103A4;0.210004!10034-101E7;0.203524!10072-101I9;0.186343!10199-103F1;0.699424!10200-103F2;5.22931e-05!10697-109G4;0.0202645!10723-110A3;0.594235!10179-103C8;0.536284!10160-103A7;0.231042!10180-103C9;0.12328!10162-103A9;0.00135136!10021-101D3;0.00325421!10840-111E3;0.00821715!10706-109H4;0.674308!10033-101E6;0.376452!10032-101E5;0.150807!10490-107B4;0.163318!10439-106E7;0.263666!10022-101D4;0.997449!10176-103C5;0.0070315!10469-106I1;0.155438!10067-101I4;0.756361!10411-106B6;0.345891!10471-106I3;0.579!10030-101E3;0.471069!10475-106I7;0.121793!10787-110H4;0.127146!10477-106I9;0.0995859!10695-109G2;0.302969!11771-123I7;0.139659!11772-123I8;0.112528!11773-123I9;0.0261358!10093-102C3;0.000772467!10442-106F1;2.0525e-05!10442-106F1;0.0145337!10201-103F3;0.0135294!10639-108I9;0.000177276!11843-124H7;0.267351!11841-124H5;0.11812!10693-109F9;0.0220405!10436-106E4;0.697339!10483-107A6;0.785146!10282-104F3;0.641902!10023-101D5;0.00985557!10066-101I3;0.0073851!10065-101I2;0.0623704!10800-110I8;0.0207114!10610-108F7;0.802568!10841-111E4;0.57369!10541-107H1;0.227597!10842-111E5;0.896185!10562-108A4;0.491661!10024-101D6;0.609264!10064-101I1;0.0043863!10609-108F6;0.066101!10048-101G3;0.0429067!10781-110G7;0.0691224!10181-103D1;0.56335!10159-103A6;0.187991!10056-101H2;0.137509!10737-110B8;0.193244!10025-101D7;0.0177074!10044-101F8;0.396916!10424-106D1;0.33216!10463-106H4;0.180197!10616-108G4;0.652066!10486-107A9;0.4106!10062-101H8;0.721455!10202-103F4;0.113048!10158-103A5;0.000495151!10441-106E9;0.107989!10031-101E4;0.0235243!10063-101H9;0.172192!10063-101H9;0.611431!11763-123H8;0.0419374!11765-123I1;0.592531!11768-123I4;0.819707!10807-111A6;0.70558!10790-110H7;0.00925201!10798-110I6;0.0583195!10786-110H3;0.241104!10591-108D6;0.336038!10593-108D8;0.167172!10590-108D5;0.568996!10026-101D8;0.248555!10096-102C6;0.121252!10168-103B6;0.70889!10154-103A1;0.185632!10209-103G2;0.14091!10061-101H7;0.00541199!10027-101D9;0.0206604!10043-101F7;0.413896!10783-110G9;0.133055!10028-101E1;0.0757754!10060-101H6;7.9267e-07!10203-103F5;0.00262059!10059-101H5;0.00202397!10047-101G2;0.00622719!10029-101E2;0.00512315!10058-101H4;0.00359031!10418-106C4;0.0171293!10492-107B6;0.550754!10694-109G1;0.176248!10797-110I5;0.028327!10057-101H3;0.537459!10100-102D1;0.0130059!10055-101H1;0.0820507!10204-103F6;0.183399!10191-103E2;0.0092109!10563-108A5;0.117234
|name=motif_ANCTGT
|name=motif_ANCTGT
|tomtom_result=MET4#MA0335.1;0;0.000210798;0.10034;0.200679;6;AACTGT;AACTGTGG;+!TAL1::TCF3#MA0091.1;5;0.00767819;3.65482;1;6;AACTGT;CGACCATCTGTT;+!sna#MA0086.1;1;0.0141926;6.75567;1;5;AACTGT;CACCTG;-!myb.Ph3#MA0054.1;1;0.0167584;7.97702;1;6;AACTGT;TAACCGTTT;+!RUNX1#MA0002.2;0;0.0179728;8.55507;1;6;AACTGT;GTCTGTGGTTT;+!REST#MA0138.2;2;0.0198583;9.45254;1;6;AACTGT;GGCGCTGTCCATGGTGCTGAA;-
}}
}}

Latest revision as of 12:13, 7 September 2012

Full Name: motif_ANCTGT

Motif matrix
POACGT
015664000
021416141614161416
030566400
040005664
050056640
060005664

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

MET4#MA0335.100.0002107980.100340.2006796AACTGTAACTGTGG+
TAL1::TCF3#MA0091.150.007678193.6548216AACTGTCGACCATCTGTT+
sna#MA0086.110.01419266.7556715AACTGTCACCTG-
myb.Ph3#MA0054.110.01675847.9770216AACTGTTAACCGTTT+
RUNX1#MA0002.200.01797288.5550716AACTGTGTCTGTGGTTT+
REST#MA0138.220.01985839.4525416AACTGTGGCGCTGTCCATGGTGCTGAA-