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MacroAPE 1083:CNhs11372 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;104.13380671021172;488.63260367819527;155.6643481051748;184.48700048166208!2;315.4927948538253;310.40674306732103;178.80232349629736;128.215...")
 
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5!10843-111E6;0.0278722!10844-111E7;0.0405804!11747-123G1;0.340136!11748-123G2;0.556783!11749-123G3;0.264286!11750-123G4;0.724808!11751-123G5;0.244694!11840-124H4;0.248934!11752-123G6;0.134995!11753-123G7;0.443931!11754-123G8;0.141841!11755-123G9;0.0950516!11756-123H1;0.44749!11833-124G6;0.0595685!11760-123H5;0.127892!11836-124G9;0.0593373!11758-123H3;0.00174053!11835-124G8;0.0132471!11762-123H7;0.0106015!11838-124H2;0.337444!11757-123H2;0.065625!11759-123H4;0.316991!11761-123H6;0.0438868!11842-124H6;0.0544966!11837-124H1;0.0245133!10568-108B1;0.0266006!13230-141I8;0.550539!13231-141I9;0.0231616!10696-109G3;0.0316377!10493-107B7;0.00102221!10494-107B8;3.97686e-06!10850-111F4;0.00951452!10851-111F5;5.3459e-05!10852-111F6;0.214208!10853-111F7;0.416135!10854-111F8;0.00342452!10855-111F9;0.606895!10856-111G1;0.385992!10847-111F1;0.0628244!10846-111E9;0.570995!10848-111F2;0.000431463!10845-111E8;1.10748e-07!10857-111G2;1.39798e-05!10858-111G3;0.000590401!10156-103A3;0.0101472!11901-125F2;0.000120796!11902-125F3;0.244261!11903-125F4;0.150301!10689-109F5;0.150415!10648-109A9;0.0191486!10784-110H1;0.0044519!10744-110C6;0.000659716!10772-110F7;0.128401!10474-106I6;1.05945e-06!10600-108E6;0.0156988!10684-109E9;0.117429!12226-129F3;0.884528!12227-129F4;0.00211809!10508-107D4;0.0735353!10539-107G8;0.636839!10607-108F4;0.593071!10555-107I6;0.000498591!10774-110F9;0.17298!10637-108I7;0.000157314!10663-109C6;0.145582!10728-110A8;0.012706!10729-110A9;0.00601071!10430-106D7;0.000259078!10730-110B1;0.00225349!10813-111B3;0.258904!10812-111B2;0.180104!10037-101F1;0.18808!10172-103C1;0.000418137!10163-103B1;0.00334397!10076-102A4;0.000191402!10073-102A1;0.000842381!10036-101E9;0.0412475!10195-103E6;0.00131756!10277-104E7;0.000498946!10434-106E2;0.0107314!10550-107I1;0.01407!10545-107H5;0.000197664!10544-107H4;0.0351407!10704-109H2;0.00268077!10510-107D6;0.231273!10558-107I9;0.450426!10020-101D2;0.0896188!10732-110B3;0.0137182!10049-101G4;0.637395!10698-109G5;0.264007!10437-106E5;0.000246986!10417-106C3;0.00498211!10035-101E8;0.00474282!10171-103B9;0.000409259!10157-103A4;0.000403964!10034-101E7;0.000146823!10072-101I9;0.000420051!10199-103F1;0.0275236!10200-103F2;0.814592!10697-109G4;0.0075217!10723-110A3;0.363068!10179-103C8;0.325069!10160-103A7;0.000956168!10180-103C9;0.00051848!10162-103A9;0.00400589!10021-101D3;0.00105626!10840-111E3;0.013187!10706-109H4;0.00425919!10033-101E6;0.582674!10032-101E5;0.000865149!10490-107B4;0.000691885!10439-106E7;5.3062e-05!10022-101D4;0.000727059!10176-103C5;0.0103598!10469-106I1;0.00260969!10067-101I4;2.35038e-05!10411-106B6;0.0065529!10471-106I3;0.17614!10030-101E3;0.000295448!10475-106I7;0.00140353!10787-110H4;0.0185853!10477-106I9;0.0483127!10695-109G2;0.129658!11771-123I7;0.00476767!11772-123I8;0.0402832!11773-123I9;0.0603956!10093-102C3;0.267821!10442-106F1;0.912415!10442-106F1;0.12461!10201-103F3;0.216449!10639-108I9;0.00277071!11843-124H7;0.148191!11841-124H5;0.0214235!10693-109F9;0.100455!10436-106E4;0.00190888!10483-107A6;7.10451e-05!10282-104F3;0.000860292!10023-101D5;0.225766!10066-101I3;0.0819448!10065-101I2;0.0755234!10800-110I8;0.0314932!10610-108F7;0.116552!10841-111E4;0.0246957!10541-107H1;0.00617962!10842-111E5;0.0138002!10562-108A4;0.0944859!10024-101D6;0.253896!10064-101I1;0.0984689!10609-108F6;0.20364!10048-101G3;0.11192!10781-110G7;0.00117189!10181-103D1;0.261634!10159-103A6;0.0003078!10056-101H2;4.62874e-06!10737-110B8;0.00192921!10025-101D7;0.00610364!10044-101F8;0.0750188!10424-106D1;0.0456892!10463-106H4;0.0015423!10616-108G4;0.00492675!10486-107A9;0.00642769!10062-101H8;0.00539461!10202-103F4;0.0381358!10158-103A5;0.200808!10441-106E9;0.000118635!10031-101E4;0.0593918!10063-101H9;0.000544888!10063-101H9;0.039523!11763-123H8;0.00414224!11765-123I1;0.086419!11768-123I4;0.0904418!10807-111A6;0.155288!10790-110H7;0.0212156!10798-110I6;6.3825e-06!10786-110H3;0.0923519!10591-108D6;0.00562295!10593-108D8;0.00323699!10590-108D5;0.125288!10026-101D8;0.000169624!10096-102C6;0.587797!10168-103B6;0.0274802!10154-103A1;0.000563092!10209-103G2;0.000169076!10061-101H7;0.0268063!10027-101D9;0.0292382!10043-101F7;0.417822!10783-110G9;0.177177!10028-101E1;0.567086!10060-101H6;0.299856!10203-103F5;0.0129169!10059-101H5;0.0734609!10047-101G2;0.0841581!10029-101E2;0.0737255!10058-101H4;0.0601757!10418-106C4;0.00937045!10492-107B6;0.126977!10694-109G1;0.00800116!10797-110I5;0.280983!10057-101H3;0.008528!10100-102D1;0.0352619!10055-101H1;0.000407687!10204-103F6;0.0127143!10191-103E2;0.00179794!10563-108A5;0.00262473
|name=CNhs11372_bl_f2
|name=CNhs11372_bl_f2
|tomtom_result=CRZ1#MA0285.1;-2;0.000632191;0.300923;0.601846;9;CAGAGGCTTTCT;GTGGCTTAG;-!TFAP2A#MA0003.1;2;0.00212971;1.01374;1;7;CAGAGGCTTTCT;CCCCCGGGC;-!Dof2#MA0020.1;-4;0.0118846;5.65707;1;6;CAGAGGCTTTCT;TGCTTT;-!che-1#MA0260.1;-4;0.0134674;6.41046;1;6;CAGAGGCTTTCT;GGTTTC;-!GCR1#MA0304.1;-4;0.0146084;6.95359;1;8;CAGAGGCTTTCT;GGCTTCCA;-
}}
}}

Latest revision as of 12:16, 7 September 2012

Full Name: CNhs11372_bl_f2

Motif matrix
POACGT
1104.13380671021172488.63260367819527155.6643481051748184.48700048166208
2315.4927948538253310.40674306732103178.80232349629736128.21589755780028
3131.95286053552164368.6339838975034404.106829035080528.224085507138014
4452.139409623824490.62128204364339147.20002804799236242.95703925978376
55.80858935005769710.665272927871742806.2902746470285110.15362205028578
685.120542200905460.7967133670427118783.353930061507863.646573345787196
70.0927.61612439034265.30163458490031750.0
82.56857161520301421.1758436288897111.0647682093766893928.1085755217739
917.495262542678883149.7294715845755365.58214005443926400.1108847935502
1099.35512968574311402.6740733895634322.11058120573356408.77797469420386
11293.8379028173676294.657386660252866.09411648668723278.32835301093627
12128.69795375769488153.22148435927582242.5639676374941408.4343532207793

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.1-20.0006321910.3009230.6018469CAGAGGCTTTCTGTGGCTTAG-
TFAP2A#MA0003.120.002129711.0137417CAGAGGCTTTCTCCCCCGGGC-
Dof2#MA0020.1-40.01188465.6570716CAGAGGCTTTCTTGCTTT-
che-1#MA0260.1-40.01346746.4104616CAGAGGCTTTCTGGTTTC-
GCR1#MA0304.1-40.01460846.9535918CAGAGGCTTTCTGGCTTCCA-
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