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MacroAPE 1083:Motif TTACNG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;640!02;0;0;0;640!03;640;0;0;0!04;0;640;0;0!05;160;160;160;160!06;0;0;640;0 |macroape_1083_sample_pvalues=11376-118A8;0.811758!11327-...")
 
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838975!10828-111C9;0.935136!10788-110H5;0.262017!10792-110H9;0.742169!10765-110E9;0.64138!10829-111D1;0.344117!10830-111D2;0.718509!10831-111D3;0.564004!10832-111D4;0.931624!10833-111D5;0.823469!10764-110E8;0.971678!10770-110F5;0.978094!10399-106A3;0.820899!10400-106A4;0.713884!10405-106A9;0.800231!10834-111D6;0.551711!10835-111D7;0.485997!10836-111D8;0.533796!10837-111D9;0.766081!10699-109G6;0.400933!10802-111A1;0.816971!10796-110I4;0.677742!10010-101C1;0.611124!10810-111A9;0.519731!10421-106C7;0.965535!10708-109H6;0.572834!12235-129G3;0.486624!12236-129G4;0.501195!12237-129G5;0.724239!10167-103B5;0.492513!10151-102I7;0.853416!10428-106D5;0.863236!10795-110I3;0.529592!10805-111A4;0.650725!10052-101G7;0.777141!10189-103D9;0.45353!10589-108D4;0.414115!10425-106D2;0.728031!10427-106D4;0.45365!10702-109G9;0.74485!10432-106D9;0.722099!10496-107C1;0.946641!10718-109I7;0.781705!10011-101C2;0.51354!10053-101G8;0.287902!10686-109F2;0.787155!10084-102B3;0.46331!10012-101C3;0.340265!10085-102B4;0.846078!10482-107A5;0.657106!10419-106C5;0.561911!10080-102A8;0.750775!10760-110E4;0.553797!10709-109H7;0.83418!10710-109H8;0.877889!10703-109H1;0.732752!10719-109I8;0.146637!10642-109A3;0.508957!10177-103C6;0.546921!10164-103B2;0.935498!10173-103C2;0.811568!10166-103B4;0.804314!10083-102B2;0.765202!10188-103D8;0.477709!10552-107I3;0.689229!10553-107I4;0.497705!10013-101C4;0.224435!10536-107G5;0.246813!10618-108G6;0.745108!10423-106C9;0.937118!10785-110H2;0.387828!12238-129G6;0.517307!12239-129G7;0.672109!12240-129G8;0.677602!10416-106C2;0.768127!10801-110I9;0.761155!10766-110F1;0.300291!10824-111C5;0.740843!10825-111C6;0.574806!10826-111C7;0.601516!10454-106G4;0.51796!10409-106B4;0.8313!10638-108I8;0.602803!10636-108I6;0.991083!10513-107D9;0.63576!10420-106C6;0.968918!10082-102B1;0.843022!10014-101C5;0.56034!10070-101I7;0.60525!10452-106G2;0.611924!10453-106G3;0.900925!10449-106F8;0.823888!10042-101F6;0.898178!10069-101I6;0.735077!10193-103E4;0.502427!10631-108I1;0.641786!10438-106E6;0.6599!10488-107B2;0.856895!10196-103E7;0.888659!10071-101I8;0.248374!10071-101I8;0.742596!10041-101F5;0.957652!10451-106G1;0.325443!10450-106F9;0.605505!10604-108F1;0.558838!10605-108F2;0.85472!10606-108F3;0.886924!10603-108E9;0.756398!10497-107C2;0.83435!10448-106F7;0.614861!10643-109A4;0.665684!10426-106D3;0.945842!10431-106D8;0.82848!10197-103E8;0.657599!10443-106F2;0.521378!10815-111B5;0.88037!10816-111B6;0.644714!10817-111B7;0.72303!10015-101C6;0.546329!10410-106B5;0.441058!10054-101G9;0.341831!10758-110E2;0.809088!10711-109H9;0.224821!10040-101F4;0.783127!10470-106I2;0.810815!10415-106C1;0.978749!10198-103E9;0.93668!10614-108G2;0.662581!10612-108F9;0.937345!10549-107H9;0.545922!10615-108G3;0.829093!10487-107B1;0.183561!10433-106E1;0.528505!10688-109F4;0.472391!10444-106F3;0.564848!10444-106F3;0.502543!10485-107A8;0.501606!10413-106B8;0.948697!10175-103C4;0.35842!10161-103A8;0.824136!12131-128D7;0.841395!10624-108H3;0.587313!10712-109I1;0.445093!10205-103F7;0.481131!10206-103F8;0.257352!10207-103F9;0.465276!10050-101G5;0.410799!10051-101G6;0.761443!10016-101C7;0.613563!10046-101G1;0.449897!10778-110G4;0.351699!10633-108I3;0.478096!10818-111B8;0.955693!10819-111B9;0.814803!10820-111C1;0.818154!10484-107A7;0.892851!10808-111A7;0.454977!10169-103B7;0.801531!10153-102I9;0.784439!13425-144D5;0.881462!13433-144E4;0.481192!13437-144E8;0.348041!11904-125F5;0.373634!11905-125F6;0.638413!10039-101F3;0.689398!10791-110H8;0.775837!10017-101C8;0.515991!10045-101F9;0.758367!10509-107D5;0.775059!10839-111E2;0.659816!10692-109F8;0.0623534!10079-102A7;0.597038!10078-102A6;0.43045!10721-110A1;0.872955!10569-108B2;0.96284!10570-108B3;0.745307!10571-108B4;0.783708!10647-109A8;0.560294!10752-110D5;0.599364!10782-110G8;0.287766!10726-110A6;0.477427!10018-101C9;0.723047!10086-102B5;0.786669!10182-103D2;0.68343!10165-103B3;0.891674!10499-107C4;0.78193!10408-106B3;0.729785!10019-101D1;0.392473!10068-101I5;0.244683!10075-102A3;0.21857!10077-102A5;0.583996!10727-110A7;0.556984!10775-110G1;0.903133!10412-106B7;0.360296!12231-129F8;0.694528!12232-129F9;0.983413!12233-129G1;0.764962!12234-129G2;0.873452!10414-106B9;0.915538!10170-103B8;0.942231!10183-103D3;0.760772!10150-102I6;0.83054!10174-103C3;0.882575!10155-103A2;0.861557!10038-101F2;0.82117!10838-111E1;0.804333!10759-110E3;0.875658!10514-107E1;0.759671!10465-106H6;0.205185!10691-109F7;0.602568!10843-111E6;0.563591!10844-111E7;0.334583!11747-123G1;0.339661!11748-123G2;0.499923!11749-123G3;0.313744!11750-123G4;0.730473!11751-123G5;0.370122!11840-124H4;0.802584!11752-123G6;0.632561!11753-123G7;0.636767!11754-123G8;0.67847!11755-123G9;0.00853063!11756-123H1;0.118648!11833-124G6;0.803703!11760-123H5;0.576764!11836-124G9;0.179498!11758-123H3;0.606008!11835-124G8;0.873788!11762-123H7;0.723698!11838-124H2;0.589913!11757-123H2;0.657038!11759-123H4;0.85353!11761-123H6;0.526757!11842-124H6;0.929169!11837-124H1;0.286914!10568-108B1;0.650936!13230-141I8;0.0272573!13231-141I9;0.981863!10696-109G3;0.856485!10493-107B7;0.936158!10494-107B8;0.932473!10850-111F4;0.977295!10851-111F5;0.343601!10852-111F6;0.581164!10853-111F7;0.402455!10854-111F8;0.21944!10855-111F9;0.244496!10856-111G1;0.718255!10847-111F1;0.847221!10846-111E9;0.046608!10848-111F2;0.280423!10845-111E8;0.44566!10857-111G2;0.360765!10858-111G3;0.381139!10156-103A3;0.233668!11901-125F2;0.858806!11902-125F3;0.374818!11903-125F4;0.372148!10689-109F5;0.262066!10648-109A9;0.655895!10784-110H1;0.459438!10744-110C6;0.502037!10772-110F7;0.729412!10474-106I6;0.37792!10600-108E6;0.63381!10684-109E9;0.541649!12226-129F3;0.17184!12227-129F4;0.753894!10508-107D4;0.635013!10539-107G8;0.981195!10607-108F4;0.62378!10555-107I6;0.832733!10774-110F9;0.73698!10637-108I7;0.832127!10663-109C6;0.685471!10728-110A8;0.937536!10729-110A9;0.638863!10430-106D7;0.831955!10730-110B1;0.989906!10813-111B3;0.488975!10812-111B2;0.984735!10037-101F1;0.189487!10172-103C1;0.777808!10163-103B1;0.758814!10076-102A4;0.849166!10073-102A1;0.545375!10036-101E9;0.898344!10195-103E6;0.705731!10277-104E7;0.73742!10434-106E2;0.634935!10550-107I1;0.855469!10545-107H5;0.94202!10544-107H4;0.896783!10704-109H2;0.972492!10510-107D6;0.753636!10558-107I9;0.983771!10020-101D2;0.388612!10732-110B3;0.214781!10049-101G4;0.574803!10698-109G5;0.807144!10437-106E5;0.654607!10417-106C3;0.650356!10035-101E8;0.559377!10171-103B9;0.729979!10157-103A4;0.817623!10034-101E7;0.828961!10072-101I9;0.754459!10199-103F1;0.987054!10200-103F2;0.628067!10697-109G4;0.798304!10723-110A3;0.620194!10179-103C8;0.772844!10160-103A7;0.918067!10180-103C9;0.875703!10162-103A9;0.765398!10021-101D3;0.443899!10840-111E3;0.624377!10706-109H4;0.814932!10033-101E6;0.656636!10032-101E5;0.889394!10490-107B4;0.756831!10439-106E7;0.941574!10022-101D4;0.735949!10176-103C5;0.349338!10469-106I1;0.95232!10067-101I4;0.679847!10411-106B6;0.405972!10471-106I3;0.335217!10030-101E3;0.922226!10475-106I7;0.676674!10787-110H4;0.939417!10477-106I9;0.734856!10695-109G2;0.600398!11771-123I7;0.173736!11772-123I8;0.940469!11773-123I9;0.931399!10093-102C3;0.0288869!10442-106F1;0.386408!10442-106F1;0.959027!10201-103F3;0.55121!10639-108I9;0.315782!11843-124H7;0.983107!11841-124H5;0.383391!10693-109F9;0.417773!10436-106E4;0.855201!10483-107A6;0.484417!10282-104F3;0.566507!10023-101D5;0.542803!10066-101I3;0.62158!10065-101I2;0.803164!10800-110I8;0.717334!10610-108F7;0.35366!10841-111E4;0.770397!10541-107H1;0.817983!10842-111E5;0.685031!10562-108A4;0.853055!10024-101D6;0.671707!10064-101I1;0.696049!10609-108F6;0.539411!10048-101G3;0.0250198!10781-110G7;0.184177!10181-103D1;0.175965!10159-103A6;0.843802!10056-101H2;0.88625!10737-110B8;0.681255!10025-101D7;0.630215!10044-101F8;0.0791583!10424-106D1;0.247411!10463-106H4;0.799835!10616-108G4;0.436527!10486-107A9;0.996519!10062-101H8;0.416104!10202-103F4;0.480913!10158-103A5;0.407674!10441-106E9;0.793221!10031-101E4;0.940298!10063-101H9;0.67076!10063-101H9;0.872258!11763-123H8;0.455159!11765-123I1;0.458709!11768-123I4;0.404277!10807-111A6;0.510811!10790-110H7;0.5968!10798-110I6;0.572711!10786-110H3;0.877787!10591-108D6;0.739713!10593-108D8;0.946272!10590-108D5;0.935349!10026-101D8;0.720252!10096-102C6;0.25743!10168-103B6;0.193552!10154-103A1;0.696958!10209-103G2;0.838467!10061-101H7;0.817674!10027-101D9;0.519785!10043-101F7;0.169354!10783-110G9;0.13756!10028-101E1;0.317955!10060-101H6;0.238386!10203-103F5;0.49019!10059-101H5;0.770705!10047-101G2;0.856802!10029-101E2;0.46743!10058-101H4;0.631324!10418-106C4;0.498644!10492-107B6;0.947288!10694-109G1;0.740737!10797-110I5;0.262697!10057-101H3;0.663591!10100-102D1;0.524752!10055-101H1;0.303474!10204-103F6;0.413579!10191-103E2;0.223131!10563-108A5;0.425848
|name=motif_TTACNG
|name=motif_TTACNG
|tomtom_result=HOXA5#MA0158.1;2;0.00564087;2.68506;1;6;TTACAG;AATTAGTG;-!ovo#MA0126.1;2;0.0166188;7.91053;1;6;TTACAG;AGTAACAGT;+!prd#MA0239.1;2;0.0166188;7.91053;1;6;TTACAG;AGTAACAGT;+!THI2#MA0407.1;4;0.0179564;8.54725;1;6;TTACAG;GTTCTTAGAGTTTCC;-
}}
}}

Latest revision as of 12:56, 7 September 2012

Full Name: motif_TTACNG

Motif matrix
POACGT
01000640
02000640
03640000
04064000
05160160160160
06006400

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HOXA5#MA0158.120.005640872.6850616TTACAGAATTAGTG-
ovo#MA0126.120.01661887.9105316TTACAGAGTAACAGT+
prd#MA0239.120.01661887.9105316TTACAGAGTAACAGT+
THI2#MA0407.140.01795648.5472516TTACAGGTTCTTAGAGTTTCC-
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