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MacroAPE 1083:Motif300: Difference between revisions

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432!10788-110H5;0.783284!10792-110H9;0.567389!10765-110E9;0.534972!10829-111D1;0.55877!10830-111D2;0.554374!10831-111D3;0.78023!10832-111D4;0.68058!10833-111D5;0.474673!10764-110E8;0.382418!10770-110F5;0.470337!10399-106A3;0.649825!10400-106A4;0.345351!10405-106A9;0.385144!10834-111D6;0.364239!10835-111D7;0.465269!10836-111D8;0.902461!10837-111D9;0.895457!10699-109G6;0.699479!10802-111A1;0.582277!10796-110I4;0.921381!10010-101C1;0.649142!10810-111A9;0.210063!10421-106C7;0.449914!10708-109H6;0.919096!12235-129G3;0.808371!12236-129G4;0.253932!12237-129G5;0.132701!10167-103B5;0.170287!10151-102I7;0.841825!10428-106D5;0.848988!10795-110I3;0.954326!10805-111A4;0.955414!10052-101G7;0.760294!10189-103D9;0.152336!10589-108D4;0.605684!10425-106D2;0.505431!10427-106D4;0.709!10702-109G9;0.696186!10432-106D9;0.184956!10496-107C1;0.852345!10718-109I7;0.679185!10011-101C2;0.256306!10053-101G8;0.262207!10686-109F2;0.989605!10084-102B3;0.377705!10012-101C3;0.666451!10085-102B4;0.816812!10482-107A5;0.73179!10419-106C5;0.421969!10080-102A8;0.584605!10760-110E4;0.262282!10709-109H7;0.582027!10710-109H8;0.230933!10703-109H1;0.880174!10719-109I8;0.413061!10642-109A3;0.677505!10177-103C6;0.667983!10164-103B2;0.98124!10173-103C2;0.987786!10166-103B4;0.887299!10083-102B2;0.973272!10188-103D8;0.801452!10552-107I3;0.949296!10553-107I4;0.398468!10013-101C4;0.577087!10536-107G5;0.311899!10618-108G6;0.347596!10423-106C9;0.936556!10785-110H2;0.798855!12238-129G6;0.968842!12239-129G7;0.490168!12240-129G8;0.166788!10416-106C2;0.292738!10801-110I9;0.804324!10766-110F1;0.568855!10824-111C5;0.681635!10825-111C6;0.812416!10826-111C7;0.930058!10454-106G4;0.771367!10409-106B4;0.933384!10638-108I8;0.439305!10636-108I6;0.856731!10513-107D9;0.721864!10420-106C6;0.553521!10082-102B1;0.932105!10014-101C5;0.383014!10070-101I7;0.346023!10452-106G2;0.275846!10453-106G3;0.892166!10449-106F8;0.877041!10042-101F6;0.823735!10069-101I6;0.883267!10193-103E4;0.0823558!10631-108I1;0.900804!10438-106E6;0.741445!10488-107B2;0.916118!10196-103E7;0.887351!10071-101I8;0.231511!10071-101I8;0.540126!10041-101F5;0.799245!10451-106G1;0.530814!10450-106F9;0.687828!10604-108F1;0.796879!10605-108F2;0.747704!10606-108F3;0.825631!10603-108E9;0.966451!10497-107C2;0.47798!10448-106F7;0.852376!10643-109A4;0.745976!10426-106D3;0.698089!10431-106D8;0.729146!10197-103E8;0.668507!10443-106F2;0.123214!10815-111B5;0.885109!10816-111B6;0.824538!10817-111B7;0.604253!10015-101C6;0.811866!10410-106B5;0.401834!10054-101G9;0.854835!10758-110E2;0.488805!10711-109H9;0.725!10040-101F4;0.80332!10470-106I2;0.756566!10415-106C1;0.819731!10198-103E9;0.333316!10614-108G2;0.418263!10612-108F9;0.221256!10549-107H9;0.637717!10615-108G3;0.849861!10487-107B1;0.410318!10433-106E1;0.654693!10688-109F4;0.206756!10444-106F3;0.938326!10444-106F3;0.681288!10485-107A8;0.805418!10413-106B8;0.536615!10175-103C4;0.678191!10161-103A8;0.945454!12131-128D7;0.793389!10624-108H3;0.793062!10712-109I1;0.875775!10205-103F7;0.93164!10206-103F8;0.189302!10207-103F9;0.11652!10050-101G5;0.10547!10051-101G6;0.291333!10016-101C7;0.170325!10046-101G1;0.198765!10778-110G4;0.194617!10633-108I3;0.675791!10818-111B8;0.46592!10819-111B9;0.537619!10820-111C1;0.474938!10484-107A7;0.446644!10808-111A7;0.508549!10169-103B7;0.794976!10153-102I9;0.801358!13425-144D5;0.923426!13433-144E4;0.742915!13437-144E8;0.675261!11904-125F5;0.839113!11905-125F6;0.548991!10039-101F3;0.453494!10791-110H8;0.776814!10017-101C8;0.249269!10045-101F9;0.619406!10509-107D5;0.706076!10839-111E2;0.22063!10692-109F8;0.671831!10079-102A7;0.808805!10078-102A6;0.226548!10721-110A1;0.15343!10569-108B2;0.378431!10570-108B3;0.612906!10571-108B4;0.512776!10647-109A8;0.401908!10752-110D5;0.911615!10782-110G8;0.416647!10726-110A6;0.416075!10018-101C9;0.86964!10086-102B5;0.297456!10182-103D2;0.780269!10165-103B3;0.982064!10499-107C4;0.970074!10408-106B3;0.95944!10019-101D1;0.814332!10068-101I5;0.304643!10075-102A3;0.206369!10077-102A5;0.378418!10727-110A7;0.702514!10775-110G1;0.953784!10412-106B7;0.861701!12231-129F8;0.660151!12232-129F9;0.755727!12233-129G1;0.845154!12234-129G2;0.651775!10414-106B9;0.649179!10170-103B8;0.747143!10183-103D3;0.741304!10150-102I6;0.948633!10174-103C3;0.935429!10155-103A2;0.748131!10038-101F2;0.942516!10838-111E1;0.932724!10759-110E3;0.960337!10514-107E1;0.191736!10465-106H6;0.583126!10691-109F7;0.715692!10843-111E6;0.31031!10844-111E7;0.983557!11747-123G1;0.502592!11748-123G2;0.28586!11749-123G3;0.348182!11750-123G4;0.61615!11751-123G5;0.618808!11840-124H4;0.468468!11752-123G6;0.363744!11753-123G7;0.834957!11754-123G8;0.616736!11755-123G9;0.744413!11756-123H1;0.586044!11833-124G6;0.587434!11760-123H5;0.315979!11836-124G9;0.967953!11758-123H3;0.470638!11835-124G8;0.657865!11762-123H7;0.537834!11838-124H2;0.952438!11757-123H2;0.782983!11759-123H4;0.363273!11761-123H6;0.502319!11842-124H6;0.949781!11837-124H1;0.845092!10568-108B1;0.629981!13230-141I8;0.366812!13231-141I9;0.370441!10696-109G3;0.509579!10493-107B7;0.718056!10494-107B8;0.881232!10850-111F4;0.573439!10851-111F5;0.357289!10852-111F6;0.874498!10853-111F7;0.798996!10854-111F8;0.657661!10855-111F9;0.877411!10856-111G1;0.611348!10847-111F1;0.857201!10846-111E9;0.975362!10848-111F2;0.455162!10845-111E8;0.396814!10857-111G2;0.922799!10858-111G3;0.640024!10156-103A3;0.829231!11901-125F2;0.929921!11902-125F3;0.423778!11903-125F4;0.285442!10689-109F5;0.335673!10648-109A9;0.636287!10784-110H1;0.580827!10744-110C6;0.453279!10772-110F7;0.949472!10474-106I6;0.546701!10600-108E6;0.594579!10684-109E9;0.385095!12226-129F3;0.992615!12227-129F4;0.161893!10508-107D4;0.660578!10539-107G8;0.240336!10607-108F4;0.220925!10555-107I6;0.869604!10774-110F9;0.324243!10637-108I7;0.902727!10663-109C6;0.962002!10728-110A8;0.859847!10729-110A9;0.751136!10430-106D7;0.558667!10730-110B1;0.771505!10813-111B3;0.475168!10812-111B2;0.455391!10037-101F1;0.426353!10172-103C1;0.82778!10163-103B1;0.948721!10076-102A4;0.964159!10073-102A1;0.79352!10036-101E9;0.771344!10195-103E6;0.677866!10277-104E7;0.962243!10434-106E2;0.461372!10550-107I1;0.513283!10545-107H5;0.593556!10544-107H4;0.766178!10704-109H2;0.986634!10510-107D6;0.507413!10558-107I9;0.703269!10020-101D2;0.625125!10732-110B3;0.626297!10049-101G4;0.858586!10698-109G5;0.0421511!10437-106E5;0.756994!10417-106C3;0.222179!10035-101E8;0.928669!10171-103B9;0.740453!10157-103A4;0.89474!10034-101E7;0.897282!10072-101I9;0.755965!10199-103F1;0.778951!10200-103F2;0.0642438!10697-109G4;0.0696412!10723-110A3;0.979672!10179-103C8;0.270806!10160-103A7;0.661745!10180-103C9;0.984316!10162-103A9;0.766401!10021-101D3;0.879249!10840-111E3;0.0982937!10706-109H4;0.785941!10033-101E6;0.28304!10032-101E5;0.820777!10490-107B4;0.723487!10439-106E7;0.723765!10022-101D4;0.375155!10176-103C5;0.333187!10469-106I1;0.939793!10067-101I4;0.752433!10411-106B6;0.55118!10471-106I3;0.768637!10030-101E3;0.783185!10475-106I7;0.803906!10787-110H4;0.559752!10477-106I9;0.0241213!10695-109G2;0.325634!11771-123I7;0.582041!11772-123I8;0.669936!11773-123I9;0.731161!10093-102C3;0.914338!10442-106F1;0.164706!10442-106F1;0.917811!10201-103F3;0.997035!10639-108I9;0.46313!11843-124H7;0.206986!11841-124H5;0.498886!10693-109F9;0.683353!10436-106E4;0.476321!10483-107A6;0.528032!10282-104F3;0.884634!10023-101D5;0.2428!10066-101I3;0.172525!10065-101I2;0.160217!10800-110I8;0.110817!10610-108F7;0.240847!10841-111E4;0.756705!10541-107H1;0.397222!10842-111E5;0.684325!10562-108A4;0.526964!10024-101D6;0.23166!10064-101I1;0.632419!10609-108F6;0.312866!10048-101G3;0.27842!10781-110G7;0.297931!10181-103D1;0.222821!10159-103A6;0.833325!10056-101H2;0.986982!10737-110B8;0.753092!10025-101D7;0.578432!10044-101F8;0.877453!10424-106D1;0.961644!10463-106H4;0.944274!10616-108G4;0.833174!10486-107A9;0.179416!10062-101H8;0.921017!10202-103F4;0.40781!10158-103A5;0.0547804!10441-106E9;0.52735!10031-101E4;0.924607!10063-101H9;0.634237!10063-101H9;0.83326!11763-123H8;0.343515!11765-123I1;0.285659!11768-123I4;0.645384!10807-111A6;0.337475!10790-110H7;0.845058!10798-110I6;0.646258!10786-110H3;0.76272!10591-108D6;0.928057!10593-108D8;0.973445!10590-108D5;0.776315!10026-101D8;0.94798!10096-102C6;0.160166!10168-103B6;0.380453!10154-103A1;0.977555!10209-103G2;0.885847!10061-101H7;0.118379!10027-101D9;0.0955842!10043-101F7;0.492907!10783-110G9;0.81317!10028-101E1;0.889982!10060-101H6;0.262956!10203-103F5;0.180191!10059-101H5;0.274678!10047-101G2;0.102355!10029-101E2;0.940065!10058-101H4;0.156302!10418-106C4;0.0784428!10492-107B6;0.735265!10694-109G1;0.948775!10797-110I5;0.508418!10057-101H3;0.348668!10100-102D1;0.114765!10055-101H1;0.281123!10204-103F6;0.334987!10191-103E2;0.317479!10563-108A5;0.376175
|name=motif300
|name=motif300
|tomtom_result=Klf4#MA0039.1;1;0.00122597;0.583563;1;8;GAGGAAAG;TAAAGGAAGG;+!SPIB#MA0081.1;1;0.0035344;1.68237;1;6;GAGGAAAG;AGAGGAA;+!TEAD1#MA0090.1;2;0.00372915;1.77508;1;8;GAGGAAAG;CGGAGGAATGTG;-!MAC1#MA0326.1;1;0.00909486;4.32915;1;7;GAGGAAAG;TGAGCAAA;-!ETS1#MA0098.1;-1;0.00970932;4.62164;1;6;GAGGAAAG;CGGAAA;-!EWSR1-FLI1#MA0149.1;1;0.0128222;6.10335;1;8;GAGGAAAG;GGAAGGAAGGAAGGAAGG;+!PPARG::RXRA#MA0065.2;3;0.0136273;6.48658;1;8;GAGGAAAG;GTAGGGCAAAGGTCA;+!FEV#MA0156.1;0;0.014075;6.69968;1;8;GAGGAAAG;CAGGAAAT;+!SFL1#MA0377.1;9;0.0147507;7.02135;1;8;GAGGAAAG;TAGAGAATAGAAGAAATAAAA;+!ELF5#MA0136.1;0;0.0166137;7.90812;1;8;GAGGAAAG;AAGGAAGTA;-!pan#MA0237.1;0;0.0197958;9.42279;1;8;GAGGAAAG;GATCAAAG;-!sd#MA0243.1;2;0.0206153;9.81289;1;8;GAGGAAAG;CCGAGGAATGTC;-
}}
}}

Latest revision as of 13:12, 7 September 2012

Full Name: motif300

Motif matrix
POACGT
011188680941063923377
02115005316382183363
03418521292804746131
04534337781189851643
05120207076531889
061059308045143001474
071138371261114133238
08860101165614587

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.110.001225970.58356318GAGGAAAGTAAAGGAAGG+
SPIB#MA0081.110.00353441.6823716GAGGAAAGAGAGGAA+
TEAD1#MA0090.120.003729151.7750818GAGGAAAGCGGAGGAATGTG-
MAC1#MA0326.110.009094864.3291517GAGGAAAGTGAGCAAA-
ETS1#MA0098.1-10.009709324.6216416GAGGAAAGCGGAAA-
EWSR1-FLI1#MA0149.110.01282226.1033518GAGGAAAGGGAAGGAAGGAAGGAAGG+
PPARG::RXRA#MA0065.230.01362736.4865818GAGGAAAGGTAGGGCAAAGGTCA+
FEV#MA0156.100.0140756.6996818GAGGAAAGCAGGAAAT+
SFL1#MA0377.190.01475077.0213518GAGGAAAGTAGAGAATAGAAGAAATAAAA+
ELF5#MA0136.100.01661377.9081218GAGGAAAGAAGGAAGTA-
pan#MA0237.100.01979589.4227918GAGGAAAGGATCAAAG-
sd#MA0243.120.02061539.8128918GAGGAAAGCCGAGGAATGTC-
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