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MacroAPE 1083:CNhs12952 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;265.4174715968651;200.54718936363759;881.672228669782;116.53941191117532!2;723.9322546888862;237.21503130883926;478.1391335026543;24.8898820...")
 
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29-106D6;0.00308075!10464-106H5;0.21236!10827-111C8;0.0224539!10789-110H6;0.00812333!10828-111C9;0.0115464!10788-110H5;0.0209184!10792-110H9;0.0451437!10765-110E9;0.0161707!10829-111D1;0.0189153!10830-111D2;0.00803897!10831-111D3;0.0177107!10832-111D4;0.0113769!10833-111D5;0.0182849!10764-110E8;0.0118314!10770-110F5;0.0183948!10399-106A3;0.00771582!10400-106A4;0.00998624!10405-106A9;0.0150456!10834-111D6;0.0211358!10835-111D7;0.0133369!10836-111D8;0.00329184!10837-111D9;0.0306137!10699-109G6;0.00920233!10802-111A1;0.000328508!10796-110I4;0.0140907!10010-101C1;0.157076!10810-111A9;0.010349!10421-106C7;0.0438526!10708-109H6;0.0269389!12235-129G3;0.0509192!12236-129G4;0.154536!12237-129G5;0.232837!10167-103B5;0.321313!10151-102I7;0.0537107!10428-106D5;0.0332721!10795-110I3;0.7003!10805-111A4;0.00881109!10052-101G7;0.2398!10189-103D9;0.0306421!10589-108D4;0.0558742!10425-106D2;0.0547641!10427-106D4;0.346965!10702-109G9;0.0134082!10432-106D9;0.163553!10496-107C1;0.124735!10718-109I7;0.266745!10011-101C2;0.0465085!10053-101G8;0.014029!10686-109F2;0.295869!10084-102B3;0.210281!10012-101C3;0.0205089!10085-102B4;0.0270939!10482-107A5;0.0673602!10419-106C5;0.531132!10080-102A8;0.895989!10760-110E4;0.0680219!10709-109H7;0.0974737!10710-109H8;0.827897!10703-109H1;0.191349!10719-109I8;0.451897!10642-109A3;0.690771!10177-103C6;0.980468!10164-103B2;0.0621597!10173-103C2;0.039194!10166-103B4;0.0479761!10083-102B2;0.0334462!10188-103D8;0.0390371!10552-107I3;0.0236491!10553-107I4;0.0227032!10013-101C4;0.678691!10536-107G5;0.00969676!10618-108G6;0.432304!10423-106C9;0.899862!10785-110H2;0.202662!12238-129G6;0.619554!12239-129G7;0.0175884!12240-129G8;0.0214494!10416-106C2;0.0683783!10801-110I9;0.0138338!10766-110F1;0.0273507!10824-111C5;0.00999588!10825-111C6;0.00923107!10826-111C7;0.0131811!10454-106G4;0.0165576!10409-106B4;0.0100196!10638-108I8;0.0051288!10636-108I6;0.0467004!10513-107D9;0.414812!10420-106C6;0.02461!10082-102B1;0.108095!10014-101C5;0.209072!10070-101I7;0.0185413!10452-106G2;0.0488914!10453-106G3;0.0767315!10449-106F8;0.00224387!10042-101F6;0.00162518!10069-101I6;0.0137723!10193-103E4;0.245804!10631-108I1;0.026273!10438-106E6;0.00297224!10488-107B2;0.645855!10196-103E7;0.0133434!10071-101I8;0.0146677!10071-101I8;0.0288002!10041-101F5;0.0639752!10451-106G1;0.00792242!10450-106F9;0.0404205!10604-108F1;0.0460844!10605-108F2;0.751896!10606-108F3;0.228641!10603-108E9;0.663198!10497-107C2;0.78194!10448-106F7;0.255904!10643-109A4;0.275317!10426-106D3;0.392752!10431-106D8;0.896512!10197-103E8;0.0888298!10443-106F2;0.0923352!10815-111B5;0.933625!10816-111B6;0.036626!10817-111B7;0.0706598!10015-101C6;0.0408546!10410-106B5;0.0343952!10054-101G9;0.0794998!10758-110E2;0.0859626!10711-109H9;0.746121!10040-101F4;0.0412542!10470-106I2;0.0259088!10415-106C1;0.0938122!10198-103E9;0.837501!10614-108G2;0.00809746!10612-108F9;0.365735!10549-107H9;0.0485514!10615-108G3;0.053833!10487-107B1;0.8442!10433-106E1;0.0736269!10688-109F4;0.386315!10444-106F3;0.990051!10444-106F3;0.832596!10485-107A8;0.775692!10413-106B8;0.513701!10175-103C4;0.660163!10161-103A8;0.051377!12131-128D7;0.021784!10624-108H3;0.746441!10712-109I1;0.690591!10205-103F7;0.0128097!10206-103F8;0.0212923!10207-103F9;0.0441425!10050-101G5;0.0251089!10051-101G6;0.509498!10016-101C7;0.358118!10046-101G1;0.158578!10778-110G4;0.0572919!10633-108I3;0.244849!10818-111B8;0.852622!10819-111B9;0.0158844!10820-111C1;0.015391!10484-107A7;0.0188332!10808-111A7;0.128486!10169-103B7;0.00894803!10153-102I9;0.0511315!13425-144D5;0.0314519!13433-144E4;0.293628!13437-144E8;0.175514!11904-125F5;0.0924583!11905-125F6;0.892103!10039-101F3;0.493288!10791-110H8;0.0214456!10017-101C8;0.401567!10045-101F9;0.0765101!10509-107D5;0.0133008!10839-111E2;0.908702!10692-109F8;0.0692986!10079-102A7;0.283473!10078-102A6;0.11831!10721-110A1;0.562594!10569-108B2;0.0456864!10570-108B3;0.903134!10571-108B4;0.869562!10647-109A8;0.43403!10752-110D5;0.614322!10782-110G8;0.0469212!10726-110A6;0.893256!10018-101C9;0.294306!10086-102B5;0.847262!10182-103D2;0.73257!10165-103B3;0.0369345!10499-107C4;0.0329218!10408-106B3;0.226979!10019-101D1;0.356563!10068-101I5;0.0376167!10075-102A3;0.0493394!10077-102A5;0.105953!10727-110A7;0.391942!10775-110G1;0.0177277!10412-106B7;0.030492!12231-129F8;0.234516!12232-129F9;0.03036!12233-129G1;0.0246976!12234-129G2;0.0844191!10414-106B9;0.076655!10170-103B8;0.768993!10183-103D3;0.0583178!10150-102I6;0.0415138!10174-103C3;0.029325!10155-103A2;0.0657393!10038-101F2;0.0171653!10838-111E1;0.0176655!10759-110E3;0.81099!10514-107E1;0.449661!10465-106H6;0.0384257!10691-109F7;0.151839!10843-111E6;0.360916!10844-111E7;0.612262!11747-123G1;0.996449!11748-123G2;0.339488!11749-123G3;0.762603!11750-123G4;0.566475!11751-123G5;0.985315!11840-124H4;0.791359!11752-123G6;0.960221!11753-123G7;0.784936!11754-123G8;0.805903!11755-123G9;0.346981!11756-123H1;0.275239!11833-124G6;0.983773!11760-123H5;0.826113!11836-124G9;0.984379!11758-123H3;0.817346!11835-124G8;0.620198!11762-123H7;0.196499!11838-124H2;0.677608!11757-123H2;0.298171!11759-123H4;0.468405!11761-123H6;0.93711!11842-124H6;0.435833!11837-124H1;0.269308!10568-108B1;0.107957!13230-141I8;0.195195!13231-141I9;0.458089!10696-109G3;0.320101!10493-107B7;0.00978543!10494-107B8;0.0779103!10850-111F4;0.286535!10851-111F5;0.016735!10852-111F6;0.00274589!10853-111F7;0.292762!10854-111F8;0.0360265!10855-111F9;0.979975!10856-111G1;0.0808175!10847-111F1;0.113056!10846-111E9;0.290618!10848-111F2;0.105317!10845-111E8;0.0299464!10857-111G2;0.525125!10858-111G3;0.042938!10156-103A3;0.00574623!11901-125F2;0.0258512!11902-125F3;0.473037!11903-125F4;0.986119!10689-109F5;0.420798!10648-109A9;0.00425366!10784-110H1;3.95551e-05!10744-110C6;0.810273!10772-110F7;0.038161!10474-106I6;0.00407058!10600-108E6;0.0246327!10684-109E9;0.800869!12226-129F3;0.88585!12227-129F4;0.980517!10508-107D4;5.4159e-05!10539-107G8;0.512203!10607-108F4;0.575606!10555-107I6;0.464206!10774-110F9;0.560781!10637-108I7;0.101463!10663-109C6;0.993282!10728-110A8;0.798755!10729-110A9;0.959736!10430-106D7;0.372365!10730-110B1;0.0112997!10813-111B3;0.62206!10812-111B2;0.346846!10037-101F1;0.479292!10172-103C1;0.0232073!10163-103B1;0.0613513!10076-102A4;0.0249958!10073-102A1;0.022184!10036-101E9;0.0839594!10195-103E6;0.0212811!10277-104E7;0.0386687!10434-106E2;0.00690844!10550-107I1;0.714581!10545-107H5;0.487136!10544-107H4;0.319749!10704-109H2;0.840528!10510-107D6;0.892032!10558-107I9;0.536427!10020-101D2;0.50247!10732-110B3;0.0800333!10049-101G4;0.715934!10698-109G5;0.255333!10437-106E5;0.923486!10417-106C3;0.00768582!10035-101E8;0.928241!10171-103B9;0.0203092!10157-103A4;0.044118!10034-101E7;0.0271416!10072-101I9;0.0192573!10199-103F1;0.0850055!10200-103F2;0.656264!10697-109G4;0.0637166!10723-110A3;0.769239!10179-103C8;0.217721!10160-103A7;0.0631999!10180-103C9;0.052026!10162-103A9;0.23644!10021-101D3;0.129979!10840-111E3;0.00315081!10706-109H4;0.00353199!10033-101E6;0.664576!10032-101E5;0.0191846!10490-107B4;0.0203761!10439-106E7;0.0482531!10022-101D4;0.201793!10176-103C5;0.0159888!10469-106I1;0.0356344!10067-101I4;0.252356!10411-106B6;0.0374213!10471-106I3;0.342483!10030-101E3;0.385151!10475-106I7;0.0207625!10787-110H4;0.237134!10477-106I9;0.0639609!10695-109G2;0.665178!11771-123I7;0.0930341!11772-123I8;0.694097!11773-123I9;0.894617!10093-102C3;0.0432439!10442-106F1;0.205286!10442-106F1;0.0229297!10201-103F3;0.0684482!10639-108I9;0.022314!11843-124H7;0.551415!11841-124H5;0.533913!10693-109F9;0.304556!10436-106E4;0.169202!10483-107A6;0.0816491!10282-104F3;0.254226!10023-101D5;0.968827!10066-101I3;0.6246!10065-101I2;0.315051!10800-110I8;0.0621035!10610-108F7;0.202643!10841-111E4;0.652629!10541-107H1;0.0211692!10842-111E5;0.747285!10562-108A4;0.879817!10024-101D6;0.32625!10064-101I1;0.0131058!10609-108F6;0.378907!10048-101G3;0.200274!10781-110G7;0.0341198!10181-103D1;0.488879!10159-103A6;0.0376759!10056-101H2;0.0243316!10737-110B8;0.0721221!10025-101D7;0.339788!10044-101F8;0.148612!10424-106D1;0.0136893!10463-106H4;0.00569591!10616-108G4;0.488593!10486-107A9;0.621242!10062-101H8;0.0659914!10202-103F4;0.017434!10158-103A5;0.284694!10441-106E9;0.010959!10031-101E4;0.941957!10063-101H9;0.0209485!10063-101H9;0.0734946!11763-123H8;0.04091!11765-123I1;0.911261!11768-123I4;0.75773!10807-111A6;0.896258!10790-110H7;0.840913!10798-110I6;0.328202!10786-110H3;0.70715!10591-108D6;0.320269!10593-108D8;0.177049!10590-108D5;0.530226!10026-101D8;0.0716688!10096-102C6;0.956828!10168-103B6;0.381083!10154-103A1;0.0325254!10209-103G2;0.022046!10061-101H7;0.274324!10027-101D9;0.16751!10043-101F7;0.818666!10783-110G9;0.340883!10028-101E1;0.137527!10060-101H6;0.455604!10203-103F5;0.0476245!10059-101H5;0.361939!10047-101G2;0.414999!10029-101E2;0.0629505!10058-101H4;0.0756912!10418-106C4;0.0906148!10492-107B6;0.435019!10694-109G1;0.00197472!10797-110I5;0.0608565!10057-101H3;0.538712!10100-102D1;0.303778!10055-101H1;0.00425346!10204-103F6;0.024017!10191-103E2;0.0265489!10563-108A5;0.0489792
|name=CNhs12952_bu_f0
|name=CNhs12952_bu_f0
|tomtom_result=Trl#MA0205.1;0;1.05189e-06;0.000500702;0.0010014;10;GAAAGAGACAGA;GAGAGAGCAA;-!id1#MA0120.1;1;0.00148042;0.70468;0.70468;11;GAAAGAGACAGA;CGAAAAGGAAAA;-!Gata1#MA0035.2;-1;0.00384051;1.82808;1;11;GAAAGAGACAGA;ACAGATAAGAA;+!BAS1#MA0278.1;5;0.0102192;4.86433;1;12;GAAAGAGACAGA;GCACAGCCAGAGTCAAGTCAA;+!ECM23#MA0293.1;-1;0.0106395;5.06441;1;11;GAAAGAGACAGA;AAAGATCTAAA;+!GAT4#MA0302.1;-1;0.011256;5.35787;1;11;GAAAGAGACAGA;AAAGATCTAAA;+!Tal1::Gata1#MA0140.1;2;0.0148595;7.07314;1;12;GAAAGAGACAGA;CTGGTGGGGACAGATAAG;+!IRF1#MA0050.1;0;0.0160878;7.65779;1;12;GAAAGAGACAGA;GAAAGCGAAACC;+!Klf4#MA0039.1;-2;0.0198954;9.47021;1;10;GAAAGAGACAGA;TAAAGGAAGG;+
}}
}}

Latest revision as of 13:49, 7 September 2012

Full Name: CNhs12952_bu_f0

Motif matrix
POACGT
1265.4174715968651200.54718936363759881.672228669782116.53941191117532
2723.9322546888862237.21503130883926478.139133502654324.889882041082053
3515.9392494177639416.66901581267086456.121583937131275.44645237389535
4918.57326346392760.0266.1949276248428279.40811045269066
53.708060702435538310.2468478644751961450.2213929745510.0
61447.96087921521870.013.8760830139258542.3393393123170627
70.48487360534596247.4579074257058791456.23352051040980.0
8647.349180694616525.6927757807166196.622637116297494.5117079498316
9593.02865059359764.272724823083611.40282382799039495.47210229679719
10889.44513479789747.537981322293434337.43914364283285229.7540417784383
11378.17501156127935240.75260391033248836.53475768382658.713928386022667
12621.8622976038488430.6102219375593359.355054786510952.348727213542354

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.101.05189e-060.0005007020.001001410GAAAGAGACAGAGAGAGAGCAA-
id1#MA0120.110.001480420.704680.7046811GAAAGAGACAGACGAAAAGGAAAA-
Gata1#MA0035.2-10.003840511.82808111GAAAGAGACAGAACAGATAAGAA+
BAS1#MA0278.150.01021924.86433112GAAAGAGACAGAGCACAGCCAGAGTCAAGTCAA+
ECM23#MA0293.1-10.01063955.06441111GAAAGAGACAGAAAAGATCTAAA+
GAT4#MA0302.1-10.0112565.35787111GAAAGAGACAGAAAAGATCTAAA+
Tal1::Gata1#MA0140.120.01485957.07314112GAAAGAGACAGACTGGTGGGGACAGATAAG+
IRF1#MA0050.100.01608787.65779112GAAAGAGACAGAGAAAGCGAAACC+
Klf4#MA0039.1-20.01989549.47021110GAAAGAGACAGATAAAGGAAGG+
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