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MacroAPE 1083:DDIT3 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;8.82464892970891;3.606990112731124;27.425144558355168;1.3288910941641006!2;8.6034987214858;7.08476604244113;25.497409931032372;0.0!3;8.03198...")
 
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7G3;0.468573!10429-106D6;0.760521!10464-106H5;0.69018!10827-111C8;0.639813!10789-110H6;0.55116!10828-111C9;0.52739!10788-110H5;0.804091!10792-110H9;0.415802!10765-110E9;0.702236!10829-111D1;0.243501!10830-111D2;0.998125!10831-111D3;0.854799!10832-111D4;0.310931!10833-111D5;0.79231!10764-110E8;0.487188!10770-110F5;0.434073!10399-106A3;0.290968!10400-106A4;0.324772!10405-106A9;0.215799!10834-111D6;0.423949!10835-111D7;0.632352!10836-111D8;0.889492!10837-111D9;0.814811!10699-109G6;0.751771!10802-111A1;0.354289!10796-110I4;0.513012!10010-101C1;0.83728!10810-111A9;0.305283!10421-106C7;0.0507517!10708-109H6;0.332392!12235-129G3;0.471871!12236-129G4;0.0347234!12237-129G5;0.11682!10167-103B5;0.119598!10151-102I7;0.00856388!10428-106D5;0.00391564!10795-110I3;0.478883!10805-111A4;0.658902!10052-101G7;0.349244!10189-103D9;0.976706!10589-108D4;0.975939!10425-106D2;0.325684!10427-106D4;0.839802!10702-109G9;0.647116!10432-106D9;0.11033!10496-107C1;0.722017!10718-109I7;0.0284982!10011-101C2;0.981548!10053-101G8;0.59254!10686-109F2;0.976442!10084-102B3;0.361486!10012-101C3;0.00608557!10085-102B4;0.00252809!10482-107A5;0.0898801!10419-106C5;0.703832!10080-102A8;0.806338!10760-110E4;0.52967!10709-109H7;0.894484!10710-109H8;0.582006!10703-109H1;0.325243!10719-109I8;0.0566995!10642-109A3;0.0932322!10177-103C6;0.0696868!10164-103B2;0.00352034!10173-103C2;0.0036888!10166-103B4;0.00967138!10083-102B2;0.0151824!10188-103D8;0.00715738!10552-107I3;0.00680152!10553-107I4;0.808881!10013-101C4;0.468029!10536-107G5;0.384542!10618-108G6;0.967088!10423-106C9;0.716504!10785-110H2;0.875095!12238-129G6;0.748081!12239-129G7;0.0111835!12240-129G8;0.00100272!10416-106C2;0.0137189!10801-110I9;0.530722!10766-110F1;0.0829789!10824-111C5;0.327634!10825-111C6;0.633862!10826-111C7;0.717466!10454-106G4;0.652014!10409-106B4;0.717495!10638-108I8;0.772866!10636-108I6;0.599198!10513-107D9;0.571012!10420-106C6;0.784476!10082-102B1;0.0858247!10014-101C5;0.426915!10070-101I7;0.471338!10452-106G2;0.652979!10453-106G3;0.267212!10449-106F8;0.296745!10042-101F6;0.340474!10069-101I6;0.00688727!10193-103E4;0.23246!10631-108I1;0.00114052!10438-106E6;0.700302!10488-107B2;0.282047!10196-103E7;0.67655!10071-101I8;0.39155!10071-101I8;0.972142!10041-101F5;0.0581861!10451-106G1;0.849266!10450-106F9;0.798797!10604-108F1;0.987512!10605-108F2;0.437916!10606-108F3;0.465883!10603-108E9;0.342741!10497-107C2;0.785592!10448-106F7;0.700708!10643-109A4;0.722283!10426-106D3;0.515051!10431-106D8;0.998275!10197-103E8;0.972484!10443-106F2;0.520797!10815-111B5;0.784258!10816-111B6;0.758553!10817-111B7;0.905453!10015-101C6;0.666191!10410-106B5;0.306165!10054-101G9;0.152641!10758-110E2;0.418523!10711-109H9;0.160501!10040-101F4;0.74651!10470-106I2;0.00165916!10415-106C1;0.821182!10198-103E9;0.815898!10614-108G2;0.155771!10612-108F9;0.380019!10549-107H9;0.765085!10615-108G3;0.358493!10487-107B1;0.122161!10433-106E1;0.396952!10688-109F4;0.55107!10444-106F3;0.65521!10444-106F3;0.555994!10485-107A8;0.61456!10413-106B8;0.549381!10175-103C4;0.614318!10161-103A8;0.00177682!12131-128D7;0.0037739!10624-108H3;0.733618!10712-109I1;0.45113!10205-103F7;0.380128!10206-103F8;0.386972!10207-103F9;0.305732!10050-101G5;0.416753!10051-101G6;0.667013!10016-101C7;0.177237!10046-101G1;0.121901!10778-110G4;0.689771!10633-108I3;0.0487576!10818-111B8;0.954589!10819-111B9;0.945211!10820-111C1;0.946457!10484-107A7;0.874459!10808-111A7;0.136634!10169-103B7;0.216073!10153-102I9;0.00480677!13425-144D5;0.00731277!13433-144E4;0.932134!13437-144E8;0.975577!11904-125F5;0.895907!11905-125F6;0.243372!10039-101F3;0.411106!10791-110H8;0.0025912!10017-101C8;0.517897!10045-101F9;0.716682!10509-107D5;0.912325!10839-111E2;0.976211!10692-109F8;0.583861!10079-102A7;0.967998!10078-102A6;0.367927!10721-110A1;0.0822954!10569-108B2;0.0765464!10570-108B3;0.107715!10571-108B4;0.0430164!10647-109A8;0.0925452!10752-110D5;0.48806!10782-110G8;0.884272!10726-110A6;0.0307182!10018-101C9;0.117461!10086-102B5;0.0493494!10182-103D2;0.205867!10165-103B3;0.000193229!10499-107C4;0.000987053!10408-106B3;0.16662!10019-101D1;0.867199!10068-101I5;0.553582!10075-102A3;0.874564!10077-102A5;0.577407!10727-110A7;0.926879!10775-110G1;0.943455!10412-106B7;0.846421!12231-129F8;0.314052!12232-129F9;0.419613!12233-129G1;0.667667!12234-129G2;0.329171!10414-106B9;0.190003!10170-103B8;0.199521!10183-103D3;0.00134192!10150-102I6;0.00113378!10174-103C3;0.000957105!10155-103A2;0.000655848!10038-101F2;0.00320365!10838-111E1;0.00113908!10759-110E3;0.109702!10514-107E1;0.780649!10465-106H6;0.88005!10691-109F7;0.065429!10843-111E6;0.642123!10844-111E7;0.148794!11747-123G1;0.0284788!11748-123G2;0.463845!11749-123G3;0.626347!11750-123G4;0.830181!11751-123G5;0.130354!11840-124H4;0.0393461!11752-123G6;0.00886204!11753-123G7;0.624074!11754-123G8;0.857734!11755-123G9;0.498105!11756-123H1;0.130494!11833-124G6;0.680368!11760-123H5;0.162958!11836-124G9;0.680465!11758-123H3;0.422033!11835-124G8;0.0971709!11762-123H7;0.955161!11838-124H2;0.0429488!11757-123H2;0.0652184!11759-123H4;0.953919!11761-123H6;0.868821!11842-124H6;0.41635!11837-124H1;0.840214!10568-108B1;0.465373!13230-141I8;0.115979!13231-141I9;0.550054!10696-109G3;0.396774!10493-107B7;0.507875!10494-107B8;0.341839!10850-111F4;0.187646!10851-111F5;0.145645!10852-111F6;0.733066!10853-111F7;0.250219!10854-111F8;0.874468!10855-111F9;0.521953!10856-111G1;0.816033!10847-111F1;0.553823!10846-111E9;0.514245!10848-111F2;0.901659!10845-111E8;0.828153!10857-111G2;0.479214!10858-111G3;0.917304!10156-103A3;0.363343!11901-125F2;0.00247314!11902-125F3;0.425433!11903-125F4;0.150369!10689-109F5;0.313128!10648-109A9;0.57781!10784-110H1;0.830729!10744-110C6;0.809137!10772-110F7;0.419468!10474-106I6;0.957174!10600-108E6;0.0523723!10684-109E9;0.34939!12226-129F3;0.229386!12227-129F4;0.27096!10508-107D4;0.0586683!10539-107G8;0.00300498!10607-108F4;0.0435357!10555-107I6;0.157727!10774-110F9;0.0443589!10637-108I7;0.943126!10663-109C6;0.642226!10728-110A8;0.459634!10729-110A9;0.920197!10430-106D7;0.634678!10730-110B1;0.661662!10813-111B3;0.00212922!10812-111B2;0.19859!10037-101F1;0.0111258!10172-103C1;0.00299131!10163-103B1;0.000821205!10076-102A4;0.000948774!10073-102A1;0.00146421!10036-101E9;0.0216251!10195-103E6;0.00214652!10277-104E7;0.00373228!10434-106E2;0.0620315!10550-107I1;0.98489!10545-107H5;0.963781!10544-107H4;0.951424!10704-109H2;0.606351!10510-107D6;0.338727!10558-107I9;0.817282!10020-101D2;0.559482!10732-110B3;0.332176!10049-101G4;0.735799!10698-109G5;0.525157!10437-106E5;0.520849!10417-106C3;0.567659!10035-101E8;0.729029!10171-103B9;0.00187902!10157-103A4;0.00108239!10034-101E7;0.00143559!10072-101I9;0.00193232!10199-103F1;0.0433256!10200-103F2;0.468661!10697-109G4;0.249103!10723-110A3;0.975674!10179-103C8;0.781864!10160-103A7;0.0535722!10180-103C9;0.0143471!10162-103A9;0.41229!10021-101D3;0.103407!10840-111E3;0.125691!10706-109H4;0.512573!10033-101E6;0.0119876!10032-101E5;0.000984358!10490-107B4;0.00238543!10439-106E7;0.549656!10022-101D4;0.690353!10176-103C5;0.396605!10469-106I1;0.0012968!10067-101I4;0.730217!10411-106B6;0.367358!10471-106I3;0.973778!10030-101E3;0.97876!10475-106I7;0.334414!10787-110H4;0.656434!10477-106I9;0.93827!10695-109G2;0.402122!11771-123I7;0.157043!11772-123I8;0.734163!11773-123I9;0.644609!10093-102C3;0.533947!10442-106F1;0.479028!10442-106F1;0.206776!10201-103F3;0.0745596!10639-108I9;0.584312!11843-124H7;0.734665!11841-124H5;0.729642!10693-109F9;0.794532!10436-106E4;0.0563778!10483-107A6;0.617926!10282-104F3;0.52754!10023-101D5;0.0882208!10066-101I3;0.131076!10065-101I2;0.327197!10800-110I8;0.20026!10610-108F7;0.908141!10841-111E4;0.196994!10541-107H1;0.697197!10842-111E5;0.091269!10562-108A4;0.0418831!10024-101D6;0.0830533!10064-101I1;0.553148!10609-108F6;0.207271!10048-101G3;0.453624!10781-110G7;0.169635!10181-103D1;0.022222!10159-103A6;0.000442701!10056-101H2;0.00190215!10737-110B8;0.0272909!10025-101D7;0.25282!10044-101F8;0.997272!10424-106D1;0.838226!10463-106H4;0.510463!10616-108G4;0.680629!10486-107A9;0.375105!10062-101H8;0.522014!10202-103F4;0.919436!10158-103A5;0.382577!10441-106E9;0.00455909!10031-101E4;0.554109!10063-101H9;0.00466017!10063-101H9;0.0831742!11763-123H8;0.501727!11765-123I1;0.0109171!11768-123I4;0.00409963!10807-111A6;0.00439158!10790-110H7;0.964427!10798-110I6;0.80973!10786-110H3;0.198558!10591-108D6;0.348502!10593-108D8;0.0908067!10590-108D5;0.122753!10026-101D8;0.910739!10096-102C6;0.445427!10168-103B6;0.300315!10154-103A1;0.00141113!10209-103G2;0.00201908!10061-101H7;0.472383!10027-101D9;0.368682!10043-101F7;0.817796!10783-110G9;0.706727!10028-101E1;0.438082!10060-101H6;0.120076!10203-103F5;0.210258!10059-101H5;0.296566!10047-101G2;0.0663419!10029-101E2;0.72126!10058-101H4;0.415048!10418-106C4;0.201862!10492-107B6;0.666208!10694-109G1;0.489638!10797-110I5;0.128579!10057-101H3;0.621947!10100-102D1;0.115398!10055-101H1;0.732051!10204-103F6;0.490145!10191-103E2;0.738936!10563-108A5;0.565479
|name=DDIT3_f1
|name=DDIT3_f1
|tomtom_result=Ddit3::Cebpa#MA0019.1;-1;1.2293e-09;5.85146e-07;1.17029e-06;12;GGGGATTGCATTT;GGGATTGCATCT;-!Cebpa#MA0102.1;-1;0.00280518;1.33526;1;12;GGGGATTGCATTT;GAGATTGCGAAA;-!AFT1#MA0269.1;2;0.00406408;1.9345;1;13;GGGGATTGCATTT;TTACATATTGCACCCGATTGG;+!dl_2#MA0023.1;0;0.00478627;2.27827;1;10;GGGGATTGCATTT;GGGGATTTCC;+!Pax4#MA0068.1;4;0.00610547;2.9062;1;13;GGGGATTGCATTT;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!TEC1#MA0406.1;-1;0.00813051;3.87012;1;8;GGGGATTGCATTT;GGGAATGT;-!REL#MA0101.1;0;0.0104925;4.99441;1;10;GGGGATTGCATTT;GGGGATTTCC;+!RELA#MA0107.1;0;0.0109184;5.19714;1;10;GGGGATTGCATTT;GGGAATTTCC;+!NFKB1#MA0105.1;0;0.0132128;6.2893;1;11;GGGGATTGCATTT;GGGGATTCCCC;+!slbo#MA0244.1;-4;0.014408;6.85821;1;8;GGGGATTGCATTT;ATTGCAAA;+!PHD1#MA0355.1;-3;0.0174062;8.28534;1;10;GGGGATTGCATTT;TGCTGCAGGT;-!SOK2#MA0385.1;-2;0.0199642;9.50295;1;11;GGGGATTGCATTT;TGCCTGCAGGT;-
}}
}}

Latest revision as of 13:59, 7 September 2012

Full Name: DDIT3_f1

Motif matrix
POACGT
18.824648929708913.60699011273112427.4251445583551681.3288910941641006
28.60349872148587.0847660424411325.4974099310323720.0
38.0319841220184986.83429705570107123.2819281591503543.0374653580893702
42.2780990185670283.037465358089370225.23898156499009810.631128753312804
534.5745176923068560.04.5561980371340482.054958965518382
60.00.75936633952234260.759366339522342639.666942015914636
70.00.00.041.1856746949593
80.75936633952234260.037.388842997347613.0374653580893702
90.035.8427813846115065.3428933103477950.0
1037.138374010607550.04.0473006843517510.0
115.566033363396420511.3904950928351198.03198412201849816.197162116709226
125.3155643766564029.871762413790459.01449051458947916.98385738992297
134.55619803713404812.81132221220121410.65845768700419813.159696758619846

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Ddit3::Cebpa#MA0019.1-11.2293e-095.85146e-071.17029e-0612GGGGATTGCATTTGGGATTGCATCT-
Cebpa#MA0102.1-10.002805181.33526112GGGGATTGCATTTGAGATTGCGAAA-
AFT1#MA0269.120.004064081.9345113GGGGATTGCATTTTTACATATTGCACCCGATTGG+
dl_2#MA0023.100.004786272.27827110GGGGATTGCATTTGGGGATTTCC+
Pax4#MA0068.140.006105472.9062113GGGGATTGCATTTGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
TEC1#MA0406.1-10.008130513.8701218GGGGATTGCATTTGGGAATGT-
REL#MA0101.100.01049254.99441110GGGGATTGCATTTGGGGATTTCC+
RELA#MA0107.100.01091845.19714110GGGGATTGCATTTGGGAATTTCC+
NFKB1#MA0105.100.01321286.2893111GGGGATTGCATTTGGGGATTCCCC+
slbo#MA0244.1-40.0144086.8582118GGGGATTGCATTTATTGCAAA+
PHD1#MA0355.1-30.01740628.28534110GGGGATTGCATTTTGCTGCAGGT-
SOK2#MA0385.1-20.01996429.50295111GGGGATTGCATTTTGCCTGCAGGT-
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