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MacroAPE 1083:Motif TCCNGC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;48!02;0;48;0;0!03;0;48;0;0!04;48;0;0;0!05;0;0;48;0!06;0;48;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.236894!11327-117E4;0.2447...")
 
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10827-111C8;0.274673!10789-110H6;0.189159!10828-111C9;0.161733!10788-110H5;0.145682!10792-110H9;0.378686!10765-110E9;0.209349!10829-111D1;0.4477!10830-111D2;0.434887!10831-111D3;0.17525!10832-111D4;0.0959991!10833-111D5;0.33212!10764-110E8;0.298848!10770-110F5;0.172367!10399-106A3;0.317277!10400-106A4;0.127267!10405-106A9;0.127949!10834-111D6;0.124515!10835-111D7;0.298146!10836-111D8;0.25172!10837-111D9;0.126126!10699-109G6;0.193692!10802-111A1;0.244874!10796-110I4;0.150012!10010-101C1;0.140945!10810-111A9;0.546693!10421-106C7;0.193317!10708-109H6;0.14845!12235-129G3;0.341067!12236-129G4;0.556475!12237-129G5;0.583782!10167-103B5;0.121717!10151-102I7;0.162894!10428-106D5;0.158215!10795-110I3;0.840014!10805-111A4;0.139935!10052-101G7;0.413691!10189-103D9;0.348586!10589-108D4;0.504488!10425-106D2;0.35299!10427-106D4;0.422864!10702-109G9;0.439751!10432-106D9;0.444802!10496-107C1;0.279548!10718-109I7;0.183484!10011-101C2;0.262986!10053-101G8;0.365298!10686-109F2;0.0185699!10084-102B3;0.960387!10012-101C3;0.0952322!10085-102B4;0.116277!10482-107A5;0.174096!10419-106C5;0.143714!10080-102A8;0.168429!10760-110E4;0.936187!10709-109H7;0.406524!10710-109H8;0.171395!10703-109H1;0.195401!10719-109I8;0.498293!10642-109A3;0.446904!10177-103C6;0.860821!10164-103B2;0.182333!10173-103C2;0.243213!10166-103B4;0.62958!10083-102B2;0.426664!10188-103D8;0.249813!10552-107I3;0.120686!10553-107I4;0.249673!10013-101C4;0.333568!10536-107G5;0.29597!10618-108G6;0.304951!10423-106C9;0.0887908!10785-110H2;0.205142!12238-129G6;0.0463484!12239-129G7;0.75105!12240-129G8;0.213928!10416-106C2;0.808724!10801-110I9;0.395106!10766-110F1;0.153242!10824-111C5;0.15888!10825-111C6;0.308307!10826-111C7;0.257099!10454-106G4;0.303481!10409-106B4;0.425768!10638-108I8;0.0941504!10636-108I6;0.202782!10513-107D9;0.0713558!10420-106C6;0.157464!10082-102B1;0.650537!10014-101C5;0.855837!10070-101I7;0.573339!10452-106G2;0.501207!10453-106G3;0.391422!10449-106F8;0.435059!10042-101F6;0.405121!10069-101I6;0.115141!10193-103E4;0.326121!10631-108I1;0.110754!10438-106E6;0.285867!10488-107B2;0.227681!10196-103E7;0.203276!10071-101I8;0.90548!10071-101I8;0.291423!10041-101F5;0.218528!10451-106G1;0.244461!10450-106F9;0.425691!10604-108F1;0.39382!10605-108F2;0.114016!10606-108F3;0.107831!10603-108E9;0.200088!10497-107C2;0.20267!10448-106F7;0.0535108!10643-109A4;0.484403!10426-106D3;0.268064!10431-106D8;0.227683!10197-103E8;0.344756!10443-106F2;0.446163!10815-111B5;0.66949!10816-111B6;0.26582!10817-111B7;0.220795!10015-101C6;0.230658!10410-106B5;0.355208!10054-101G9;0.250203!10758-110E2;0.223755!10711-109H9;0.691077!10040-101F4;0.615054!10470-106I2;0.134354!10415-106C1;0.345899!10198-103E9;0.805244!10614-108G2;0.353977!10612-108F9;0.652421!10549-107H9;0.198137!10615-108G3;0.476383!10487-107B1;0.315972!10433-106E1;0.0816535!10688-109F4;0.33338!10444-106F3;0.30522!10444-106F3;0.646835!10485-107A8;0.730257!10413-106B8;0.905636!10175-103C4;0.725599!10161-103A8;0.22556!12131-128D7;0.215343!10624-108H3;0.483427!10712-109I1;0.210712!10205-103F7;0.157462!10206-103F8;0.27038!10207-103F9;0.211874!10050-101G5;0.3366!10051-101G6;0.465041!10016-101C7;0.440431!10046-101G1;0.519478!10778-110G4;0.246641!10633-108I3;0.673374!10818-111B8;0.122811!10819-111B9;0.177836!10820-111C1;0.213855!10484-107A7;0.193535!10808-111A7;0.410643!10169-103B7;0.706895!10153-102I9;0.146835!13425-144D5;0.159571!13433-144E4;0.982589!13437-144E8;0.904737!11904-125F5;0.892446!11905-125F6;0.628699!10039-101F3;0.391251!10791-110H8;0.120941!10017-101C8;0.307259!10045-101F9;0.968916!10509-107D5;0.566879!10839-111E2;0.178762!10692-109F8;0.993903!10079-102A7;0.446663!10078-102A6;0.372348!10721-110A1;0.519291!10569-108B2;0.224971!10570-108B3;0.230821!10571-108B4;0.236885!10647-109A8;0.160479!10752-110D5;0.349354!10782-110G8;0.164573!10726-110A6;0.808313!10018-101C9;0.565383!10086-102B5;0.637592!10182-103D2;0.757618!10165-103B3;0.193995!10499-107C4;0.191008!10408-106B3;0.571442!10019-101D1;0.242555!10068-101I5;0.744423!10075-102A3;0.589153!10077-102A5;0.919622!10727-110A7;0.931191!10775-110G1;0.429195!10412-106B7;0.213172!12231-129F8;0.996442!12232-129F9;0.479146!12233-129G1;0.882524!12234-129G2;0.582483!10414-106B9;0.157865!10170-103B8;0.537403!10183-103D3;0.184608!10150-102I6;0.121582!10174-103C3;0.1664!10155-103A2;0.230211!10038-101F2;0.162776!10838-111E1;0.139801!10759-110E3;0.81725!10514-107E1;0.616235!10465-106H6;0.974113!10691-109F7;0.816563!10843-111E6;0.733139!10844-111E7;0.327649!11747-123G1;0.364571!11748-123G2;0.233837!11749-123G3;0.245558!11750-123G4;0.340551!11751-123G5;0.510077!11840-124H4;0.379301!11752-123G6;0.51486!11753-123G7;0.454254!11754-123G8;0.27212!11755-123G9;0.032999!11756-123H1;0.0137836!11833-124G6;0.0935251!11760-123H5;0.619953!11836-124G9;0.0543437!11758-123H3;0.0946871!11835-124G8;0.483181!11762-123H7;0.289466!11838-124H2;0.461644!11757-123H2;0.357213!11759-123H4;0.176269!11761-123H6;0.169219!11842-124H6;0.143975!11837-124H1;0.500254!10568-108B1;0.251777!13230-141I8;0.636322!13231-141I9;0.177205!10696-109G3;0.148597!10493-107B7;0.971752!10494-107B8;0.343949!10850-111F4;0.337153!10851-111F5;0.770951!10852-111F6;0.549021!10853-111F7;0.341006!10854-111F8;0.362297!10855-111F9;0.799727!10856-111G1;0.592419!10847-111F1;0.303582!10846-111E9;0.391806!10848-111F2;0.502873!10845-111E8;0.551693!10857-111G2;0.13868!10858-111G3;0.274488!10156-103A3;0.609535!11901-125F2;0.143322!11902-125F3;0.0608706!11903-125F4;0.136797!10689-109F5;0.0413701!10648-109A9;0.269184!10784-110H1;0.72901!10744-110C6;0.155393!10772-110F7;0.50001!10474-106I6;0.168197!10600-108E6;0.356836!10684-109E9;0.411542!12226-129F3;0.531735!12227-129F4;0.355229!10508-107D4;0.579292!10539-107G8;0.378006!10607-108F4;0.85212!10555-107I6;0.891335!10774-110F9;0.627536!10637-108I7;0.525305!10663-109C6;0.698813!10728-110A8;0.30144!10729-110A9;0.430377!10430-106D7;0.267603!10730-110B1;0.407895!10813-111B3;0.657047!10812-111B2;0.0958537!10037-101F1;0.231305!10172-103C1;0.118495!10163-103B1;0.212228!10076-102A4;0.173224!10073-102A1;0.130819!10036-101E9;0.370043!10195-103E6;0.096914!10277-104E7;0.128044!10434-106E2;0.361649!10550-107I1;0.195853!10545-107H5;0.157691!10544-107H4;0.81123!10704-109H2;0.522194!10510-107D6;0.5853!10558-107I9;0.429724!10020-101D2;0.864578!10732-110B3;0.393817!10049-101G4;0.893156!10698-109G5;0.649203!10437-106E5;0.0907372!10417-106C3;0.974112!10035-101E8;0.157509!10171-103B9;0.101744!10157-103A4;0.122903!10034-101E7;0.169059!10072-101I9;0.111899!10199-103F1;0.433088!10200-103F2;0.988308!10697-109G4;0.322331!10723-110A3;0.902306!10179-103C8;0.457089!10160-103A7;0.496007!10180-103C9;0.500893!10162-103A9;0.89433!10021-101D3;0.903374!10840-111E3;0.592184!10706-109H4;0.554041!10033-101E6;0.0824574!10032-101E5;0.135881!10490-107B4;0.0940958!10439-106E7;0.296132!10022-101D4;0.186594!10176-103C5;0.436641!10469-106I1;0.209976!10067-101I4;0.205536!10411-106B6;0.149511!10471-106I3;0.195702!10030-101E3;0.0809041!10475-106I7;0.212255!10787-110H4;0.426087!10477-106I9;0.664274!10695-109G2;0.975215!11771-123I7;0.0726566!11772-123I8;0.45195!11773-123I9;0.494346!10093-102C3;0.069396!10442-106F1;0.867786!10442-106F1;0.407627!10201-103F3;0.368155!10639-108I9;0.969571!11843-124H7;0.789749!11841-124H5;0.111124!10693-109F9;0.546128!10436-106E4;0.103042!10483-107A6;0.191925!10282-104F3;0.0856653!10023-101D5;0.77916!10066-101I3;0.54394!10065-101I2;0.341456!10800-110I8;0.337913!10610-108F7;0.448064!10841-111E4;0.538915!10541-107H1;0.695474!10842-111E5;0.319574!10562-108A4;0.645299!10024-101D6;0.245665!10064-101I1;0.733652!10609-108F6;0.254712!10048-101G3;0.127677!10781-110G7;0.2853!10181-103D1;0.496414!10159-103A6;0.23633!10056-101H2;0.197628!10737-110B8;0.102107!10025-101D7;0.245011!10044-101F8;0.673216!10424-106D1;0.686424!10463-106H4;0.299467!10616-108G4;0.368439!10486-107A9;0.290633!10062-101H8;0.154336!10202-103F4;0.837971!10158-103A5;0.94484!10441-106E9;0.156492!10031-101E4;0.445581!10063-101H9;0.0963752!10063-101H9;0.338971!11763-123H8;0.283283!11765-123I1;0.124028!11768-123I4;0.422348!10807-111A6;0.266057!10790-110H7;0.536175!10798-110I6;0.632753!10786-110H3;0.680846!10591-108D6;0.506886!10593-108D8;0.280764!10590-108D5;0.394414!10026-101D8;0.379072!10096-102C6;0.859648!10168-103B6;0.0776985!10154-103A1;0.205972!10209-103G2;0.188503!10061-101H7;0.39616!10027-101D9;0.265825!10043-101F7;0.0939682!10783-110G9;0.335173!10028-101E1;0.751694!10060-101H6;0.954715!10203-103F5;0.498524!10059-101H5;0.280047!10047-101G2;0.292421!10029-101E2;0.687604!10058-101H4;0.42886!10418-106C4;0.237474!10492-107B6;0.679315!10694-109G1;0.602812!10797-110I5;0.0821112!10057-101H3;0.134395!10100-102D1;0.301165!10055-101H1;0.297526!10204-103F6;0.147843!10191-103E2;0.67292!10563-108A5;0.350335
|name=motif_TCCNGC
|name=motif_TCCNGC
|tomtom_result=ACE2#MA0267.1;0;0.00249464;1.18745;1;6;TCCAGC;ACCAGCA;+!SWI5#MA0402.1;1;0.00397827;1.89366;1;6;TCCAGC;AACCAGCA;-!UGA3#MA0410.1;0;0.0073046;3.47699;1;6;TCCAGC;TCCCGCCG;-!Stat3#MA0144.1;1;0.0187406;8.92054;1;6;TCCAGC;TTCCAGGAAG;+!REST#MA0138.2;0;0.0207422;9.87328;1;6;TCCAGC;TTCAGCACCATGGACAGCGCC;+
}}
}}

Latest revision as of 14:05, 7 September 2012

Full Name: motif_TCCNGC

Motif matrix
POACGT
0100048
0204800
0304800
0448000
0500480
0604800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ACE2#MA0267.100.002494641.1874516TCCAGCACCAGCA+
SWI5#MA0402.110.003978271.8936616TCCAGCAACCAGCA-
UGA3#MA0410.100.00730463.4769916TCCAGCTCCCGCCG-
Stat3#MA0144.110.01874068.9205416TCCAGCTTCCAGGAAG+
REST#MA0138.200.02074229.8732816TCCAGCTTCAGCACCATGGACAGCGCC+
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