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MacroAPE 1083:CNhs11833 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;96.99695827010953;185.5609840939955;136.1620641659182;231.1413487989349!2;103.11351793463442;68.15212112611829;201.74264257799194;276.853073...")
 
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!10464-106H5;0.170986!10827-111C8;0.0553627!10789-110H6;0.886742!10828-111C9;0.719414!10788-110H5;0.50891!10792-110H9;0.208532!10765-110E9;0.320381!10829-111D1;0.197591!10830-111D2;0.205566!10831-111D3;0.113555!10832-111D4;0.210355!10833-111D5;0.251935!10764-110E8;0.19468!10770-110F5;0.189447!10399-106A3;0.56406!10400-106A4;0.525284!10405-106A9;0.483167!10834-111D6;0.577462!10835-111D7;0.168734!10836-111D8;0.633162!10837-111D9;0.185591!10699-109G6;0.593645!10802-111A1;0.134973!10796-110I4;0.185067!10010-101C1;0.814915!10810-111A9;0.0934658!10421-106C7;0.0245572!10708-109H6;0.250575!12235-129G3;0.326865!12236-129G4;0.0351526!12237-129G5;0.106235!10167-103B5;0.250185!10151-102I7;0.466757!10428-106D5;0.544548!10795-110I3;0.917828!10805-111A4;0.243507!10052-101G7;0.227417!10189-103D9;0.10143!10589-108D4;0.335912!10425-106D2;0.119064!10427-106D4;0.122091!10702-109G9;0.393694!10432-106D9;0.134978!10496-107C1;0.670158!10718-109I7;0.547467!10011-101C2;0.315968!10053-101G8;0.106648!10686-109F2;0.209396!10084-102B3;0.114348!10012-101C3;0.548597!10085-102B4;0.536308!10482-107A5;0.553798!10419-106C5;0.805307!10080-102A8;0.525082!10760-110E4;0.272385!10709-109H7;0.861811!10710-109H8;0.558699!10703-109H1;0.98537!10719-109I8;0.294852!10642-109A3;0.627916!10177-103C6;0.124537!10164-103B2;0.509016!10173-103C2;0.449934!10166-103B4;0.335269!10083-102B2;0.45768!10188-103D8;0.358698!10552-107I3;0.76946!10553-107I4;0.350872!10013-101C4;0.44679!10536-107G5;0.213451!10618-108G6;0.764961!10423-106C9;0.0661625!10785-110H2;0.621073!12238-129G6;0.234455!12239-129G7;0.0544058!12240-129G8;0.0377996!10416-106C2;0.290538!10801-110I9;0.198888!10766-110F1;0.361873!10824-111C5;0.468859!10825-111C6;0.325503!10826-111C7;0.345598!10454-106G4;0.442262!10409-106B4;0.308389!10638-108I8;0.605501!10636-108I6;0.364449!10513-107D9;0.803423!10420-106C6;0.561224!10082-102B1;0.125277!10014-101C5;0.590161!10070-101I7;0.188793!10452-106G2;0.445307!10453-106G3;0.0362465!10449-106F8;0.0196889!10042-101F6;0.0207122!10069-101I6;0.848843!10193-103E4;0.141604!10631-108I1;0.656917!10438-106E6;0.244985!10488-107B2;0.721786!10196-103E7;0.0877417!10071-101I8;0.739445!10071-101I8;0.320444!10041-101F5;0.464507!10451-106G1;0.626619!10450-106F9;0.169429!10604-108F1;0.287498!10605-108F2;0.181014!10606-108F3;0.365242!10603-108E9;0.160301!10497-107C2;0.191106!10448-106F7;0.800752!10643-109A4;0.0275834!10426-106D3;0.208105!10431-106D8;0.408972!10197-103E8;0.841322!10443-106F2;0.114904!10815-111B5;0.138638!10816-111B6;0.554974!10817-111B7;0.547764!10015-101C6;0.553935!10410-106B5;0.0331376!10054-101G9;0.00403206!10758-110E2;0.356698!10711-109H9;0.237931!10040-101F4;0.323276!10470-106I2;0.459738!10415-106C1;0.832042!10198-103E9;0.691852!10614-108G2;0.150065!10612-108F9;0.582807!10549-107H9;0.488313!10615-108G3;0.0893385!10487-107B1;0.15156!10433-106E1;0.500339!10688-109F4;0.335437!10444-106F3;0.487348!10444-106F3;0.689245!10485-107A8;0.647074!10413-106B8;0.935087!10175-103C4;0.938891!10161-103A8;0.470059!12131-128D7;0.543906!10624-108H3;0.287425!10712-109I1;0.993997!10205-103F7;0.286068!10206-103F8;0.185474!10207-103F9;0.519798!10050-101G5;0.65305!10051-101G6;0.196999!10016-101C7;0.387017!10046-101G1;0.50277!10778-110G4;0.560726!10633-108I3;0.0260252!10818-111B8;0.4614!10819-111B9;0.321176!10820-111C1;0.345615!10484-107A7;0.316624!10808-111A7;0.392964!10169-103B7;0.244952!10153-102I9;0.509379!13425-144D5;0.613902!13433-144E4;0.820868!13437-144E8;0.572384!11904-125F5;0.679273!11905-125F6;0.864543!10039-101F3;0.758257!10791-110H8;0.516616!10017-101C8;0.651192!10045-101F9;0.535928!10509-107D5;0.54053!10839-111E2;0.136571!10692-109F8;0.831363!10079-102A7;0.195441!10078-102A6;0.401057!10721-110A1;0.677567!10569-108B2;0.207679!10570-108B3;0.346329!10571-108B4;0.390796!10647-109A8;0.304691!10752-110D5;0.234651!10782-110G8;0.227943!10726-110A6;0.732238!10018-101C9;0.855578!10086-102B5;0.178625!10182-103D2;0.337619!10165-103B3;0.579178!10499-107C4;0.653691!10408-106B3;0.502403!10019-101D1;0.9335!10068-101I5;0.0685701!10075-102A3;0.429322!10077-102A5;0.202543!10727-110A7;0.935477!10775-110G1;0.303381!10412-106B7;0.462809!12231-129F8;0.760959!12232-129F9;0.207311!12233-129G1;0.170961!12234-129G2;0.140899!10414-106B9;0.292493!10170-103B8;0.274245!10183-103D3;0.39912!10150-102I6;0.426157!10174-103C3;0.509502!10155-103A2;0.86983!10038-101F2;0.995258!10838-111E1;0.896047!10759-110E3;0.147859!10514-107E1;0.881406!10465-106H6;0.510205!10691-109F7;0.723536!10843-111E6;0.874521!10844-111E7;0.261438!11747-123G1;0.669335!11748-123G2;0.0650537!11749-123G3;0.000980321!11750-123G4;0.039127!11751-123G5;0.00249434!11840-124H4;0.0219738!11752-123G6;0.115361!11753-123G7;0.0143698!11754-123G8;0.00947407!11755-123G9;0.0161189!11756-123H1;0.475877!11833-124G6;0.17082!11760-123H5;0.644992!11836-124G9;0.210882!11758-123H3;0.0699835!11835-124G8;0.0608545!11762-123H7;0.106763!11838-124H2;0.107683!11757-123H2;0.111998!11759-123H4;0.334066!11761-123H6;0.0340698!11842-124H6;0.0483883!11837-124H1;0.249442!10568-108B1;0.0760165!13230-141I8;0.378264!13231-141I9;0.0730387!10696-109G3;0.0966628!10493-107B7;0.388398!10494-107B8;0.00384134!10850-111F4;0.6383!10851-111F5;0.280721!10852-111F6;0.705775!10853-111F7;0.809998!10854-111F8;0.657586!10855-111F9;0.565211!10856-111G1;0.936732!10847-111F1;0.655121!10846-111E9;0.148685!10848-111F2;0.220216!10845-111E8;0.640856!10857-111G2;0.0695644!10858-111G3;0.425057!10156-103A3;0.494099!11901-125F2;0.483197!11902-125F3;0.577483!11903-125F4;0.923058!10689-109F5;0.933231!10648-109A9;0.347896!10784-110H1;0.931639!10744-110C6;0.502679!10772-110F7;0.23058!10474-106I6;0.327287!10600-108E6;0.409166!10684-109E9;0.582284!12226-129F3;0.811461!12227-129F4;0.382064!10508-107D4;0.316195!10539-107G8;0.0672089!10607-108F4;0.0147032!10555-107I6;0.577394!10774-110F9;0.027741!10637-108I7;0.578916!10663-109C6;0.347199!10728-110A8;0.898548!10729-110A9;0.444416!10430-106D7;0.0385462!10730-110B1;0.280389!10813-111B3;0.122463!10812-111B2;0.0132684!10037-101F1;0.220713!10172-103C1;0.518554!10163-103B1;0.382119!10076-102A4;0.469275!10073-102A1;0.43099!10036-101E9;0.368011!10195-103E6;0.497439!10277-104E7;0.572665!10434-106E2;0.638941!10550-107I1;0.878224!10545-107H5;0.794373!10544-107H4;0.920002!10704-109H2;0.964345!10510-107D6;0.321287!10558-107I9;0.102411!10020-101D2;0.866873!10732-110B3;0.302414!10049-101G4;0.280582!10698-109G5;0.732182!10437-106E5;0.422569!10417-106C3;0.803488!10035-101E8;0.988676!10171-103B9;0.462672!10157-103A4;0.40995!10034-101E7;0.518183!10072-101I9;0.483391!10199-103F1;0.406601!10200-103F2;0.23587!10697-109G4;0.0527548!10723-110A3;0.735492!10179-103C8;0.390733!10160-103A7;0.681951!10180-103C9;0.545539!10162-103A9;0.299212!10021-101D3;0.455649!10840-111E3;0.422786!10706-109H4;0.367152!10033-101E6;0.546187!10032-101E5;0.505988!10490-107B4;0.493986!10439-106E7;0.46968!10022-101D4;0.729242!10176-103C5;0.152776!10469-106I1;0.472834!10067-101I4;0.566956!10411-106B6;0.744938!10471-106I3;0.277286!10030-101E3;0.0543418!10475-106I7;0.830764!10787-110H4;0.0977454!10477-106I9;0.880156!10695-109G2;0.12639!11771-123I7;0.180031!11772-123I8;0.39892!11773-123I9;0.607367!10093-102C3;0.808874!10442-106F1;0.11462!10442-106F1;0.857027!10201-103F3;0.857553!10639-108I9;0.372851!11843-124H7;0.385268!11841-124H5;0.522005!10693-109F9;0.85507!10436-106E4;0.438568!10483-107A6;0.76656!10282-104F3;0.80203!10023-101D5;0.537609!10066-101I3;0.133083!10065-101I2;0.250164!10800-110I8;0.0473018!10610-108F7;0.10458!10841-111E4;0.178694!10541-107H1;0.294249!10842-111E5;0.217888!10562-108A4;0.160758!10024-101D6;0.206342!10064-101I1;0.355452!10609-108F6;0.507415!10048-101G3;0.662167!10781-110G7;0.121526!10181-103D1;0.156707!10159-103A6;0.895013!10056-101H2;0.898815!10737-110B8;0.7554!10025-101D7;0.103236!10044-101F8;0.676105!10424-106D1;0.393879!10463-106H4;0.329753!10616-108G4;0.898361!10486-107A9;0.448128!10062-101H8;0.6086!10202-103F4;0.228145!10158-103A5;0.12483!10441-106E9;0.790126!10031-101E4;0.0771663!10063-101H9;0.609519!10063-101H9;0.351467!11763-123H8;0.276767!11765-123I1;0.0458235!11768-123I4;0.187326!10807-111A6;0.080454!10790-110H7;0.61893!10798-110I6;0.141389!10786-110H3;0.1227!10591-108D6;0.205995!10593-108D8;0.148951!10590-108D5;0.088487!10026-101D8;0.280909!10096-102C6;0.247441!10168-103B6;0.326444!10154-103A1;0.58343!10209-103G2;0.617747!10061-101H7;0.0114957!10027-101D9;0.0849651!10043-101F7;0.656157!10783-110G9;0.741204!10028-101E1;0.685826!10060-101H6;0.409928!10203-103F5;0.243714!10059-101H5;0.00420909!10047-101G2;0.0283101!10029-101E2;0.104602!10058-101H4;0.0281328!10418-106C4;0.0486849!10492-107B6;0.789892!10694-109G1;0.885605!10797-110I5;0.0544333!10057-101H3;0.0859062!10100-102D1;0.0588964!10055-101H1;0.578658!10204-103F6;0.223623!10191-103E2;0.680962!10563-108A5;0.213918
|name=CNhs11833_bl_f2
|name=CNhs11833_bl_f2
|tomtom_result=Nkx3-2#MA0122.1;-2;0.00457533;2.17786;1;8;TTTCCACTGG;TCCACTTAA;-!Hltf#MA0109.1;-1;0.0053567;2.54979;1;9;TTTCCACTGG;AACCTTATAT;+!ceh-22#MA0264.1;-2;0.00723563;3.44416;1;8;TTTCCACTGG;ACCACTTGAAA;+!MET28#MA0332.1;-3;0.00953692;4.53957;1;6;TTTCCACTGG;CCACAG;-!HMG-I/Y#MA0045.1;3;0.0146523;6.9745;1;10;TTTCCACTGG;GTTTTTCCATTTGTTG;-!CTCF#MA0139.1;0;0.0148;7.04478;1;10;TTTCCACTGG;TGGCCACCAGGGGGCGCTA;+!RME1#MA0370.1;-1;0.0162751;7.74694;1;9;TTTCCACTGG;TTCCTTTGGA;-!MET4#MA0335.1;-3;0.0168673;8.02882;1;7;TTTCCACTGG;CCACAGTT;-!ZNF354C#MA0130.1;-1;0.0176278;8.39082;1;6;TTTCCACTGG;ATCCAC;+!NFATC2#MA0152.1;1;0.020006;9.52283;1;6;TTTCCACTGG;TTTTCCA;+!NRG1#MA0347.1;9;0.0205457;9.77976;1;10;TTTCCACTGG;CTAGATCAGGGTCCATCGCA;+
}}
}}

Latest revision as of 14:07, 7 September 2012

Full Name: CNhs11833_bl_f2

Motif matrix
POACGT
196.99695827010953185.5609840939955136.1620641659182231.1413487989349
2103.1135179346344268.15212112611829201.74264257799194276.85307369021365
338.1613541466179204.77275975016144156.32905823224073250.59818319993818
437.658243539153204582.702398669048118.57451221460600310.926200906150559
51.774573819722359644.69370419004511.78960593512609531.6034713840639918
6638.21473607832223.51384419238309943.59743386878305674.53534118946928
785.03763659098588257.4268910264452133.1843757517633174.21245195976405
8187.2544620242715638.06416081505321118.47549376236947306.0672387272641
987.2210497087883642.48389749307876319.25417066948586200.90223745760557
10165.72602357029058128.2597415522378270.0040338226055585.87155638382433

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Nkx3-2#MA0122.1-20.004575332.1778618TTTCCACTGGTCCACTTAA-
Hltf#MA0109.1-10.00535672.5497919TTTCCACTGGAACCTTATAT+
ceh-22#MA0264.1-20.007235633.4441618TTTCCACTGGACCACTTGAAA+
MET28#MA0332.1-30.009536924.5395716TTTCCACTGGCCACAG-
HMG-I/Y#MA0045.130.01465236.9745110TTTCCACTGGGTTTTTCCATTTGTTG-
CTCF#MA0139.100.01487.04478110TTTCCACTGGTGGCCACCAGGGGGCGCTA+
RME1#MA0370.1-10.01627517.7469419TTTCCACTGGTTCCTTTGGA-
MET4#MA0335.1-30.01686738.0288217TTTCCACTGGCCACAGTT-
ZNF354C#MA0130.1-10.01762788.3908216TTTCCACTGGATCCAC+
NFATC2#MA0152.110.0200069.5228316TTTCCACTGGTTTTCCA+
NRG1#MA0347.190.02054579.77976110TTTCCACTGGCTAGATCAGGGTCCATCGCA+