MacroAPE 1083:8-CGGWGAYW: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Macroape_1083
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168287!10788-110H5;0.247189!10792-110H9;0.17102!10765-110E9;0.0209764!10829-111D1;0.178741!10830-111D2;0.110861!10831-111D3;0.271633!10832-111D4;0.153443!10833-111D5;0.0861771!10764-110E8;0.110489!10770-110F5;0.126867!10399-106A3;0.368277!10400-106A4;0.205232!10405-106A9;0.138124!10834-111D6;0.129508!10835-111D7;0.212207!10836-111D8;0.70046!10837-111D9;0.757207!10699-109G6;0.181789!10802-111A1;0.381039!10796-110I4;0.49863!10010-101C1;0.674341!10810-111A9;0.814977!10421-106C7;0.599521!10708-109H6;0.561105!12235-129G3;0.441862!12236-129G4;0.481003!12237-129G5;0.423692!10167-103B5;0.986708!10151-102I7;0.234404!10428-106D5;0.228139!10795-110I3;0.256939!10805-111A4;0.596019!10052-101G7;0.86933!10189-103D9;0.870951!10589-108D4;0.423829!10425-106D2;0.953835!10427-106D4;0.221818!10702-109G9;0.128887!10432-106D9;0.763397!10496-107C1;0.843583!10718-109I7;0.946696!10011-101C2;0.0784498!10053-101G8;0.877999!10686-109F2;0.581757!10084-102B3;0.361104!10012-101C3;0.272733!10085-102B4;0.306618!10482-107A5;0.123897!10419-106C5;0.713042!10080-102A8;0.617023!10760-110E4;0.610497!10709-109H7;0.703144!10710-109H8;0.815473!10703-109H1;0.996576!10719-109I8;0.0858528!10642-109A3;0.983119!10177-103C6;0.255503!10164-103B2;0.290461!10173-103C2;0.250163!10166-103B4;0.235606!10083-102B2;0.176723!10188-103D8;0.167122!10552-107I3;0.33107!10553-107I4;0.426471!10013-101C4;0.685103!10536-107G5;0.96922!10618-108G6;0.237246!10423-106C9;0.701465!10785-110H2;0.257065!12238-129G6;0.936949!12239-129G7;0.110006!12240-129G8;0.030417!10416-106C2;0.265291!10801-110I9;0.355834!10766-110F1;0.185514!10824-111C5;0.378689!10825-111C6;0.716426!10826-111C7;0.735272!10454-106G4;0.736473!10409-106B4;0.711192!10638-108I8;0.511098!10636-108I6;0.697813!10513-107D9;0.948913!10420-106C6;0.871251!10082-102B1;0.723162!10014-101C5;0.380566!10070-101I7;0.828683!10452-106G2;0.591423!10453-106G3;0.604956!10449-106F8;0.891701!10042-101F6;0.607929!10069-101I6;0.201346!10193-103E4;0.991665!10631-108I1;0.222809!10438-106E6;0.222443!10488-107B2;0.604001!10196-103E7;0.590963!10071-101I8;0.413223!10071-101I8;0.626328!10041-101F5;0.236478!10451-106G1;0.797429!10450-106F9;0.509972!10604-108F1;0.493164!10605-108F2;0.460894!10606-108F3;0.683866!10603-108E9;0.392931!10497-107C2;0.513074!10448-106F7;0.738951!10643-109A4;0.784651!10426-106D3;0.449669!10431-106D8;0.781506!10197-103E8;0.846044!10443-106F2;0.731656!10815-111B5;0.469037!10816-111B6;0.747496!10817-111B7;0.845836!10015-101C6;0.782165!10410-106B5;0.783374!10054-101G9;0.110713!10758-110E2;0.858535!10711-109H9;0.904979!10040-101F4;0.525884!10470-106I2;0.279172!10415-106C1;0.641233!10198-103E9;0.871874!10614-108G2;0.705372!10612-108F9;0.92532!10549-107H9;0.83641!10615-108G3;0.532847!10487-107B1;0.161245!10433-106E1;0.784328!10688-109F4;0.463884!10444-106F3;0.413985!10444-106F3;0.286285!10485-107A8;0.349715!10413-106B8;0.941652!10175-103C4;0.974291!10161-103A8;0.18542!12131-128D7;0.12633!10624-108H3;0.636494!10712-109I1;0.725829!10205-103F7;0.491415!10206-103F8;0.663927!10207-103F9;0.903748!10050-101G5;0.547133!10051-101G6;0.730203!10016-101C7;0.891123!10046-101G1;0.798081!10778-110G4;0.949426!10633-108I3;0.917984!10818-111B8;0.832333!10819-111B9;0.585675!10820-111C1;0.578511!10484-107A7;0.621951!10808-111A7;0.134832!10169-103B7;0.14245!10153-102I9;0.212951!13425-144D5;0.218094!13433-144E4;0.2994!13437-144E8;0.30089!11904-125F5;0.203343!11905-125F6;0.478326!10039-101F3;0.78982!10791-110H8;0.269536!10017-101C8;0.800576!10045-101F9;0.423296!10509-107D5;0.622525!10839-111E2;0.253748!10692-109F8;0.424309!10079-102A7;0.981831!10078-102A6;0.801934!10721-110A1;0.955545!10569-108B2;0.27032!10570-108B3;0.68053!10571-108B4;0.840952!10647-109A8;0.952499!10752-110D5;0.213732!10782-110G8;0.338113!10726-110A6;0.912546!10018-101C9;0.395533!10086-102B5;0.351155!10182-103D2;0.625638!10165-103B3;0.14876!10499-107C4;0.161732!10408-106B3;0.629163!10019-101D1;0.562902!10068-101I5;0.990822!10075-102A3;0.914674!10077-102A5;0.67673!10727-110A7;0.656161!10775-110G1;0.712574!10412-106B7;0.183789!12231-129F8;0.59465!12232-129F9;0.256075!12233-129G1;0.246679!12234-129G2;0.476026!10414-106B9;0.466093!10170-103B8;0.483658!10183-103D3;0.266531!10150-102I6;0.251452!10174-103C3;0.204592!10155-103A2;0.261503!10038-101F2;0.260863!10838-111E1;0.241482!10759-110E3;0.443898!10514-107E1;0.54694!10465-106H6;0.667124!10691-109F7;0.490023!10843-111E6;0.471241!10844-111E7;0.0928124!11747-123G1;0.00392551!11748-123G2;0.259171!11749-123G3;0.350297!11750-123G4;0.681422!11751-123G5;0.933056!11840-124H4;0.790075!11752-123G6;0.856514!11753-123G7;0.991521!11754-123G8;0.647136!11755-123G9;0.69936!11756-123H1;0.715224!11833-124G6;0.227568!11760-123H5;0.635852!11836-124G9;0.153264!11758-123H3;0.681687!11835-124G8;0.534466!11762-123H7;0.846888!11838-124H2;0.824895!11757-123H2;0.761226!11759-123H4;0.0152982!11761-123H6;0.550807!11842-124H6;0.526261!11837-124H1;0.60415!10568-108B1;0.691594!13230-141I8;0.164119!13231-141I9;0.459722!10696-109G3;0.548792!10493-107B7;0.484004!10494-107B8;0.9429!10850-111F4;0.311595!10851-111F5;0.298541!10852-111F6;0.23048!10853-111F7;0.640726!10854-111F8;0.65765!10855-111F9;0.761349!10856-111G1;0.772831!10847-111F1;0.234257!10846-111E9;0.987916!10848-111F2;0.563876!10845-111E8;0.773501!10857-111G2;0.802762!10858-111G3;0.927078!10156-103A3;0.225238!11901-125F2;0.176049!11902-125F3;0.340495!11903-125F4;0.848962!10689-109F5;0.39594!10648-109A9;0.642705!10784-110H1;0.795596!10744-110C6;0.408445!10772-110F7;0.678258!10474-106I6;0.2503!10600-108E6;0.192445!10684-109E9;0.336012!12226-129F3;0.363116!12227-129F4;0.634887!10508-107D4;0.597241!10539-107G8;0.625928!10607-108F4;0.148556!10555-107I6;0.946797!10774-110F9;0.518449!10637-108I7;0.501925!10663-109C6;0.879074!10728-110A8;0.721316!10729-110A9;0.682638!10430-106D7;0.885482!10730-110B1;0.638835!10813-111B3;0.425402!10812-111B2;0.674647!10037-101F1;0.416231!10172-103C1;0.275177!10163-103B1;0.28691!10076-102A4;0.174549!10073-102A1;0.226644!10036-101E9;0.142808!10195-103E6;0.228282!10277-104E7;0.243814!10434-106E2;0.0665821!10550-107I1;0.783589!10545-107H5;0.751127!10544-107H4;0.849363!10704-109H2;0.959694!10510-107D6;0.379412!10558-107I9;0.637787!10020-101D2;0.587795!10732-110B3;0.872243!10049-101G4;0.822684!10698-109G5;0.54299!10437-106E5;0.454626!10417-106C3;0.313512!10035-101E8;0.528808!10171-103B9;0.252052!10157-103A4;0.199792!10034-101E7;0.17058!10072-101I9;0.232505!10199-103F1;0.200811!10200-103F2;0.589913!10697-109G4;0.8612!10723-110A3;0.538704!10179-103C8;0.803778!10160-103A7;0.302155!10180-103C9;0.349529!10162-103A9;0.183001!10021-101D3;0.184238!10840-111E3;0.276865!10706-109H4;0.210415!10033-101E6;0.676138!10032-101E5;0.240435!10490-107B4;0.248944!10439-106E7;0.901355!10022-101D4;0.431346!10176-103C5;0.86247!10469-106I1;0.177891!10067-101I4;0.630173!10411-106B6;0.954993!10471-106I3;0.32185!10030-101E3;0.955656!10475-106I7;0.747192!10787-110H4;0.674891!10477-106I9;0.277617!10695-109G2;0.961287!11771-123I7;0.885516!11772-123I8;0.848876!11773-123I9;0.486723!10093-102C3;0.101179!10442-106F1;0.473232!10442-106F1;0.646075!10201-103F3;0.640679!10639-108I9;0.698857!11843-124H7;0.16795!11841-124H5;0.638789!10693-109F9;0.582972!10436-106E4;0.863277!10483-107A6;0.788983!10282-104F3;0.891699!10023-101D5;0.874054!10066-101I3;0.790195!10065-101I2;0.54077!10800-110I8;0.660106!10610-108F7;0.519199!10841-111E4;0.673977!10541-107H1;0.375288!10842-111E5;0.729501!10562-108A4;0.915082!10024-101D6;0.499342!10064-101I1;0.60107!10609-108F6;0.192368!10048-101G3;0.699849!10781-110G7;0.6961!10181-103D1;0.191361!10159-103A6;0.217201!10056-101H2;0.206467!10737-110B8;0.340953!10025-101D7;0.765352!10044-101F8;0.117301!10424-106D1;0.209698!10463-106H4;0.152965!10616-108G4;0.485153!10486-107A9;0.800907!10062-101H8;0.731237!10202-103F4;0.719579!10158-103A5;0.781376!10441-106E9;0.143674!10031-101E4;0.90814!10063-101H9;0.243682!10063-101H9;0.2161!11763-123H8;0.400353!11765-123I1;0.570033!11768-123I4;0.777768!10807-111A6;0.409378!10790-110H7;0.819542!10798-110I6;0.747811!10786-110H3;0.41319!10591-108D6;0.865136!10593-108D8;0.947529!10590-108D5;0.47696!10026-101D8;0.586579!10096-102C6;0.40354!10168-103B6;0.0475309!10154-103A1;0.196577!10209-103G2;0.199279!10061-101H7;0.846736!10027-101D9;0.584178!10043-101F7;0.19336!10783-110G9;0.0739713!10028-101E1;0.089235!10060-101H6;0.668016!10203-103F5;0.858032!10059-101H5;0.75384!10047-101G2;0.657339!10029-101E2;0.210086!10058-101H4;0.858066!10418-106C4;0.686468!10492-107B6;0.79424!10694-109G1;0.61229!10797-110I5;0.586351!10057-101H3;0.167237!10100-102D1;0.711665!10055-101H1;0.959491!10204-103F6;0.900438!10191-103E2;0.374334!10563-108A5;0.61511 | ||
|name=8-CGGWGAYW,BestGuess:MA0348.1_OAF1(0.732262968760251),T:2050.0(43.35%),B:15354.2(35.18%),P:1e-27 | |name=8-CGGWGAYW,BestGuess:MA0348.1_OAF1(0.732262968760251),T:2050.0(43.35%),B:15354.2(35.18%),P:1e-27 | ||
|tomtom_result=HAP1#MA0312.1;0;0.0012171;0.579338;0.407561;8;CGGTGACA;CGGAGATA;+!STB5#MA0392.1;0;0.00196185;0.933842;0.407561;8;CGGTGACA;CGGTGTTA;+!YPR196W#MA0437.1;0;0.00207982;0.989997;0.407561;8;CGGTGACA;CGGAGAAAT;-!YNR063W#MA0432.1;1;0.00235353;1.12028;0.407561;7;CGGTGACA;TCGGAGAT;+!OAF1#MA0348.1;1;0.00249567;1.18794;0.407561;8;CGGTGACA;TCGGAGATA;+!PDR8#MA0354.1;1;0.00257475;1.22558;0.407561;7;CGGTGACA;GCGGAGAT;+!YJL103C#MA0427.1;4;0.00464198;2.20958;0.608684;7;CGGTGACA;TCTCCGGAGCT;-!CHA4#MA0283.1;2;0.00512712;2.44051;0.608684;6;CGGTGACA;GGCGGAGA;+!Gfi#MA0038.1;0;0.00740061;3.52269;0.669945;8;CGGTGACA;CAGTGATTTG;-!GSM1#MA0308.1;7;0.00775932;3.69343;0.669945;8;CGGTGACA;TATACTCCGGAGTTTTTTAAT;-!YDR520C#MA0422.1;1;0.0093698;4.46003;0.705311;8;CGGTGACA;CCGGAGATAA;+!YRR1#MA0439.1;1;0.00965418;4.59539;0.705311;8;CGGTGACA;GCGGAGATAAG;-!YLR278C#MA0430.1;1;0.0104497;4.97406;0.708899;7;CGGTGACA;CCGGAGTT;+!YKL222C#MA0428.1;2;0.0118661;5.64825;0.751319;7;CGGTGACA;AACGGAAAT;+!TEA1#MA0405.1;1;0.0149907;7.13559;0.889839;7;CGGTGACA;GCGGACAT;+ | |||
}} | }} |
Latest revision as of 14:17, 7 September 2012
Full Name: 8-CGGWGAYW,BestGuess:MA0348.1_OAF1(0.732262968760251),T:2050.0(43.35%),B:15354.2(35.18%),P:1e-27
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
HAP1#MA0312.1 | 0 | 0.0012171 | 0.579338 | 0.407561 | 8 | CGGTGACA | CGGAGATA | + |
STB5#MA0392.1 | 0 | 0.00196185 | 0.933842 | 0.407561 | 8 | CGGTGACA | CGGTGTTA | + |
YPR196W#MA0437.1 | 0 | 0.00207982 | 0.989997 | 0.407561 | 8 | CGGTGACA | CGGAGAAAT | - |
YNR063W#MA0432.1 | 1 | 0.00235353 | 1.12028 | 0.407561 | 7 | CGGTGACA | TCGGAGAT | + |
OAF1#MA0348.1 | 1 | 0.00249567 | 1.18794 | 0.407561 | 8 | CGGTGACA | TCGGAGATA | + |
PDR8#MA0354.1 | 1 | 0.00257475 | 1.22558 | 0.407561 | 7 | CGGTGACA | GCGGAGAT | + |
YJL103C#MA0427.1 | 4 | 0.00464198 | 2.20958 | 0.608684 | 7 | CGGTGACA | TCTCCGGAGCT | - |
CHA4#MA0283.1 | 2 | 0.00512712 | 2.44051 | 0.608684 | 6 | CGGTGACA | GGCGGAGA | + |
Gfi#MA0038.1 | 0 | 0.00740061 | 3.52269 | 0.669945 | 8 | CGGTGACA | CAGTGATTTG | - |
GSM1#MA0308.1 | 7 | 0.00775932 | 3.69343 | 0.669945 | 8 | CGGTGACA | TATACTCCGGAGTTTTTTAAT | - |
YDR520C#MA0422.1 | 1 | 0.0093698 | 4.46003 | 0.705311 | 8 | CGGTGACA | CCGGAGATAA | + |
YRR1#MA0439.1 | 1 | 0.00965418 | 4.59539 | 0.705311 | 8 | CGGTGACA | GCGGAGATAAG | - |
YLR278C#MA0430.1 | 1 | 0.0104497 | 4.97406 | 0.708899 | 7 | CGGTGACA | CCGGAGTT | + |
YKL222C#MA0428.1 | 2 | 0.0118661 | 5.64825 | 0.751319 | 7 | CGGTGACA | AACGGAAAT | + |
TEA1#MA0405.1 | 1 | 0.0149907 | 7.13559 | 0.889839 | 7 | CGGTGACA | GCGGACAT | + |