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MacroAPE 1083:11-GATTTCACAACC: Difference between revisions

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06184!12183-129A5;0.0900205!12184-129A6;0.23161!10809-111A8;0.126239!10597-108E3;0.00956219!10717-109I6;0.0424366!10455-106G5;0.000413209!10534-107G3;0.0670274!10429-106D6;0.195398!10464-106H5;0.00202007!10827-111C8;0.00048989!10789-110H6;0.438532!10828-111C9;0.540841!10788-110H5;0.82706!10792-110H9;0.336076!10765-110E9;0.842521!10829-111D1;0.901443!10830-111D2;0.186215!10831-111D3;0.296228!10832-111D4;0.442289!10833-111D5;0.898879!10764-110E8;0.546989!10770-110F5;0.822818!10399-106A3;0.716302!10400-106A4;0.584085!10405-106A9;0.42027!10834-111D6;0.811113!10835-111D7;0.500945!10836-111D8;0.15736!10837-111D9;0.00379569!10699-109G6;0.00494272!10802-111A1;0.236801!10796-110I4;0.0986617!10010-101C1;0.004033!10810-111A9;0.00180687!10421-106C7;8.8937e-07!10708-109H6;0.656682!12235-129G3;0.0221442!12236-129G4;0.66626!12237-129G5;0.08997!10167-103B5;0.0819267!10151-102I7;0.568273!10428-106D5;0.997944!10795-110I3;0.68239!10805-111A4;0.759764!10052-101G7;0.000427881!10189-103D9;0.051354!10589-108D4;0.00707428!10425-106D2;9.05619e-05!10427-106D4;0.0506911!10702-109G9;0.153481!10432-106D9;0.537423!10496-107C1;0.336674!10718-109I7;0.00641465!10011-101C2;0.641044!10053-101G8;0.172257!10686-109F2;0.00989829!10084-102B3;0.285959!10012-101C3;0.63463!10085-102B4;0.677657!10482-107A5;0.448955!10419-106C5;0.000711854!10080-102A8;0.00367665!10760-110E4;0.0345076!10709-109H7;0.00296392!10710-109H8;0.0776044!10703-109H1;0.0254761!10719-109I8;0.000261634!10642-109A3;2.66412e-05!10177-103C6;6.68294e-05!10164-103B2;0.578515!10173-103C2;0.840194!10166-103B4;0.618866!10083-102B2;0.501811!10188-103D8;0.469475!10552-107I3;0.695271!10553-107I4;0.000189035!10013-101C4;0.0315976!10536-107G5;0.212424!10618-108G6;0.0845877!10423-106C9;0.0236432!10785-110H2;0.00900915!12238-129G6;0.136849!12239-129G7;0.27536!12240-129G8;0.109649!10416-106C2;0.0288742!10801-110I9;0.0651857!10766-110F1;0.24114!10824-111C5;0.0605833!10825-111C6;1.04996e-05!10826-111C7;6.111e-06!10454-106G4;1.49012e-05!10409-106B4;2.08398e-07!10638-108I8;0.0377569!10636-108I6;0.00179325!10513-107D9;0.105911!10420-106C6;0.0028483!10082-102B1;0.00287662!10014-101C5;0.444728!10070-101I7;0.250301!10452-106G2;0.37057!10453-106G3;0.479434!10449-106F8;0.0929263!10042-101F6;0.0792305!10069-101I6;0.566962!10193-103E4;0.448566!10631-108I1;0.696382!10438-106E6;0.0286275!10488-107B2;0.0412736!10196-103E7;0.0169909!10071-101I8;0.792759!10071-101I8;0.398432!10041-101F5;0.799456!10451-106G1;0.00053557!10450-106F9;0.00151956!10604-108F1;0.000282493!10605-108F2;0.0847706!10606-108F3;0.552157!10603-108E9;0.116126!10497-107C2;0.0498203!10448-106F7;0.323899!10643-109A4;0.00129148!10426-106D3;0.000835817!10431-106D8;0.0238409!10197-103E8;0.00817966!10443-106F2;0.268389!10815-111B5;0.0456583!10816-111B6;0.0174596!10817-111B7;0.0398111!10015-101C6;0.0163612!10410-106B5;0.518714!10054-101G9;0.0850317!10758-110E2;0.729893!10711-109H9;0.138083!10040-101F4;0.0197368!10470-106I2;0.53564!10415-106C1;0.0340155!10198-103E9;0.629049!10614-108G2;0.141579!10612-108F9;0.000298238!10549-107H9;0.000522117!10615-108G3;9.94572e-06!10487-107B1;0.0178657!10433-106E1;0.00559251!10688-109F4;0.855745!10444-106F3;0.0433542!10444-106F3;0.173572!10485-107A8;0.241597!10413-106B8;0.0030738!10175-103C4;0.282008!10161-103A8;0.6164!12131-128D7;0.73688!10624-108H3;0.235527!10712-109I1;0.648873!10205-103F7;0.490638!10206-103F8;0.543162!10207-103F9;0.771306!10050-101G5;0.00773654!10051-101G6;0.633433!10016-101C7;0.96956!10046-101G1;0.374812!10778-110G4;0.812368!10633-108I3;0.5355!10818-111B8;0.0531991!10819-111B9;0.018864!10820-111C1;0.0115425!10484-107A7;0.0133474!10808-111A7;0.00165471!10169-103B7;0.148638!10153-102I9;0.677125!13425-144D5;0.902759!13433-144E4;0.0702173!13437-144E8;0.0887988!11904-125F5;0.0149884!11905-125F6;0.15!10039-101F3;0.105162!10791-110H8;0.530187!10017-101C8;0.0267989!10045-101F9;0.740225!10509-107D5;0.696084!10839-111E2;0.538922!10692-109F8;0.000748591!10079-102A7;0.103693!10078-102A6;0.332867!10721-110A1;0.316577!10569-108B2;0.00140676!10570-108B3;0.586048!10571-108B4;0.650733!10647-109A8;0.692152!10752-110D5;0.0265009!10782-110G8;0.0126781!10726-110A6;0.356255!10018-101C9;0.169797!10086-102B5;0.569607!10182-103D2;0.559783!10165-103B3;0.752579!10499-107C4;0.967511!10408-106B3;0.0523912!10019-101D1;0.14952!10068-101I5;0.00176675!10075-102A3;0.326733!10077-102A5;0.0292005!10727-110A7;1.05047e-07!10775-110G1;0.668795!10412-106B7;0.168646!12231-129F8;0.0521965!12232-129F9;0.285415!12233-129G1;0.493242!12234-129G2;0.49386!10414-106B9;0.865417!10170-103B8;0.0202186!10183-103D3;0.477381!10150-102I6;0.543565!10174-103C3;0.885913!10155-103A2;0.851435!10038-101F2;0.740577!10838-111E1;0.938603!10759-110E3;0.014062!10514-107E1;0.00113605!10465-106H6;0.133927!10691-109F7;0.110738!10843-111E6;0.782755!10844-111E7;0.00182321!11747-123G1;0.0026185!11748-123G2;0.696146!11749-123G3;0.290558!11750-123G4;0.298793!11751-123G5;0.0524464!11840-124H4;0.200166!11752-123G6;0.0257739!11753-123G7;0.0144343!11754-123G8;0.490632!11755-123G9;0.179718!11756-123H1;0.143191!11833-124G6;0.0582083!11760-123H5;0.0242849!11836-124G9;0.132028!11758-123H3;0.363474!11835-124G8;0.472688!11762-123H7;0.102352!11838-124H2;0.710857!11757-123H2;0.478971!11759-123H4;0.500414!11761-123H6;0.018857!11842-124H6;0.448759!11837-124H1;0.342895!10568-108B1;0.121869!13230-141I8;0.368158!13231-141I9;0.257641!10696-109G3;0.355838!10493-107B7;0.27019!10494-107B8;0.00284866!10850-111F4;0.16544!10851-111F5;0.181554!10852-111F6;0.858792!10853-111F7;0.132771!10854-111F8;0.127677!10855-111F9;0.383135!10856-111G1;0.0039923!10847-111F1;0.541583!10846-111E9;0.213645!10848-111F2;0.0734307!10845-111E8;0.00445288!10857-111G2;0.052338!10858-111G3;0.00257194!10156-103A3;0.451822!11901-125F2;0.952597!11902-125F3;0.411605!11903-125F4;0.268067!10689-109F5;0.178893!10648-109A9;0.0299543!10784-110H1;0.148991!10744-110C6;0.310363!10772-110F7;0.663962!10474-106I6;0.11646!10600-108E6;0.587271!10684-109E9;0.0854895!12226-129F3;0.991557!12227-129F4;0.0335926!10508-107D4;0.713295!10539-107G8;0.0499613!10607-108F4;0.00836426!10555-107I6;6.96749e-08!10774-110F9;0.00239706!10637-108I7;7.10588e-09!10663-109C6;0.00133655!10728-110A8;0.0179837!10729-110A9;5.08592e-05!10430-106D7;0.324108!10730-110B1;0.0228918!10813-111B3;2.62126e-05!10812-111B2;0.905246!10037-101F1;0.727711!10172-103C1;0.616038!10163-103B1;0.269761!10076-102A4;0.979601!10073-102A1;0.459198!10036-101E9;0.559545!10195-103E6;0.507494!10277-104E7;0.834502!10434-106E2;0.184261!10550-107I1;0.0276176!10545-107H5;0.000318277!10544-107H4;0.0289468!10704-109H2;0.0940472!10510-107D6;0.249819!10558-107I9;0.483884!10020-101D2;0.509277!10732-110B3;0.22355!10049-101G4;0.450761!10698-109G5;0.0155238!10437-106E5;0.0564668!10417-106C3;0.78951!10035-101E8;0.593617!10171-103B9;0.481976!10157-103A4;0.485074!10034-101E7;0.800839!10072-101I9;0.562274!10199-103F1;0.550353!10200-103F2;0.496028!10697-109G4;0.681531!10723-110A3;2.74418e-05!10179-103C8;0.0353713!10160-103A7;0.774876!10180-103C9;0.785136!10162-103A9;0.0960151!10021-101D3;0.106508!10840-111E3;0.0100883!10706-109H4;0.192996!10033-101E6;0.881122!10032-101E5;0.384555!10490-107B4;0.494823!10439-106E7;0.000224104!10022-101D4;0.0209607!10176-103C5;0.498487!10469-106I1;0.51535!10067-101I4;0.251358!10411-106B6;0.65302!10471-106I3;0.0184349!10030-101E3;0.0302921!10475-106I7;0.586538!10787-110H4;0.0220243!10477-106I9;2.56216e-05!10695-109G2;0.228013!11771-123I7;0.391064!11772-123I8;0.0386281!11773-123I9;0.00832976!10093-102C3;0.263384!10442-106F1;0.387605!10442-106F1;0.66641!10201-103F3;0.83048!10639-108I9;0.734753!11843-124H7;0.331738!11841-124H5;0.110598!10693-109F9;0.0227457!10436-106E4;0.101308!10483-107A6;0.0234311!10282-104F3;0.00322646!10023-101D5;0.125389!10066-101I3;0.774581!10065-101I2;0.979659!10800-110I8;0.683692!10610-108F7;0.0783401!10841-111E4;0.00263715!10541-107H1;5.30701e-05!10842-111E5;0.307286!10562-108A4;0.00502846!10024-101D6;0.0079397!10064-101I1;0.453276!10609-108F6;0.494383!10048-101G3;0.198167!10781-110G7;0.625531!10181-103D1;0.00895522!10159-103A6;0.710333!10056-101H2;0.378391!10737-110B8;0.291012!10025-101D7;0.214565!10044-101F8;0.00206778!10424-106D1;0.00382907!10463-106H4;0.444298!10616-108G4;0.129503!10486-107A9;0.707413!10062-101H8;0.0080902!10202-103F4;0.0732481!10158-103A5;0.572624!10441-106E9;0.368225!10031-101E4;0.00934091!10063-101H9;0.676992!10063-101H9;0.573278!11763-123H8;0.691135!11765-123I1;0.324444!11768-123I4;0.295821!10807-111A6;0.865389!10790-110H7;0.000355163!10798-110I6;0.00134458!10786-110H3;0.21003!10591-108D6;0.0135255!10593-108D8;0.000182496!10590-108D5;0.00401011!10026-101D8;0.000311696!10096-102C6;0.955369!10168-103B6;0.0166887!10154-103A1;0.884032!10209-103G2;0.772921!10061-101H7;0.53326!10027-101D9;0.749138!10043-101F7;0.363158!10783-110G9;0.0323243!10028-101E1;0.255089!10060-101H6;0.993277!10203-103F5;0.183495!10059-101H5;0.812136!10047-101G2;0.885618!10029-101E2;0.206959!10058-101H4;0.173943!10418-106C4;0.90758!10492-107B6;0.00175103!10694-109G1;0.00438654!10797-110I5;0.290356!10057-101H3;0.299302!10100-102D1;0.943282!10055-101H1;0.170023!10204-103F6;0.689715!10191-103E2;0.157651!10563-108A5;0.028986
|name=11-GATTTCACAACC,CNhs13208,BestGuess:CEBPA_do_HM09(0.72106432208863),T:200.0(6.08%),B:1156.0(2.54%),P:1e-27
|name=11-GATTTCACAACC,CNhs13208,BestGuess:CEBPA_do_HM09(0.72106432208863),T:200.0(6.08%),B:1156.0(2.54%),P:1e-27
|tomtom_result=CEBPA#MA0102.2;-2;0.00160271;0.762888;0.755776;9;GATTTCACAACC;TTTCGCAAT;+!slbo#MA0244.1;-1;0.00255987;1.2185;0.755776;8;GATTTCACAACC;ATTGCAAA;+!Cebpa#MA0102.1;-2;0.00308304;1.46753;0.755776;10;GATTTCACAACC;TTTCGCAATCTT;+!INO4#MA0322.1;-3;0.00365819;1.7413;0.755776;9;GATTTCACAACC;TTCACATGC;-!INO2#MA0321.1;-3;0.00482477;2.29659;0.755776;9;GATTTCACAACC;TTCACATGC;-!HLF#MA0043.1;0;0.00495551;2.35882;0.755776;12;GATTTCACAACC;TATTACGTAACC;-!znf143#MA0088.1;0;0.00966555;4.6008;0.998691;12;GATTTCACAACC;GATTTCCCATAATGCCTTGC;+!mab-3#MA0262.1;-1;0.0164145;7.8133;0.998691;11;GATTTCACAACC;AATTCGCAACATT;-!exd#MA0222.1;-1;0.0180046;8.57017;0.998691;8;GATTTCACAACC;TTTTGACA;+
}}
}}

Latest revision as of 14:37, 7 September 2012

Full Name: 11-GATTTCACAACC,CNhs13208,BestGuess:CEBPA_do_HM09(0.72106432208863),T:200.0(6.08%),B:1156.0(2.54%),P:1e-27

Motif matrix
POACGT
112.638.2123.425.8
2114.637.230.218.0
32.08.210.0179.8
44.24.248.2143.4
511.813.818.6155.8
62.0193.80.24.0
7147.223.22.027.6
847.4144.01.67.0
9163.029.20.27.6
10130.06.828.834.4
1121.4167.69.02.0
1227.6168.42.02.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CEBPA#MA0102.2-20.001602710.7628880.7557769GATTTCACAACCTTTCGCAAT+
slbo#MA0244.1-10.002559871.21850.7557768GATTTCACAACCATTGCAAA+
Cebpa#MA0102.1-20.003083041.467530.75577610GATTTCACAACCTTTCGCAATCTT+
INO4#MA0322.1-30.003658191.74130.7557769GATTTCACAACCTTCACATGC-
INO2#MA0321.1-30.004824772.296590.7557769GATTTCACAACCTTCACATGC-
HLF#MA0043.100.004955512.358820.75577612GATTTCACAACCTATTACGTAACC-
znf143#MA0088.100.009665554.60080.99869112GATTTCACAACCGATTTCCCATAATGCCTTGC+
mab-3#MA0262.1-10.01641457.81330.99869111GATTTCACAACCAATTCGCAACATT-
exd#MA0222.1-10.01800468.570170.9986918GATTTCACAACCTTTTGACA+
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