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MacroAPE 1083:TTCTTCAGCG,motif357: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;41.58;72.27;56.43;819.72!2;20.79;102.96;51.48;814.77!3;57.42;817.74;36.63;78.21!4;63.36;76.23;37.62;812.79!5;69.3;85.14;58.41;777.15!6;62.37...")
 
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828-111C9;0.698307!10788-110H5;0.531862!10792-110H9;0.730505!10765-110E9;0.71745!10829-111D1;0.176713!10830-111D2;0.674102!10831-111D3;0.458678!10832-111D4;0.681771!10833-111D5;0.43319!10764-110E8;0.868087!10770-110F5;0.801213!10399-106A3;0.816792!10400-106A4;0.841519!10405-106A9;0.950726!10834-111D6;0.960436!10835-111D7;0.760031!10836-111D8;0.275991!10837-111D9;0.0830323!10699-109G6;0.654006!10802-111A1;0.160556!10796-110I4;0.404788!10010-101C1;0.620145!10810-111A9;0.0535937!10421-106C7;0.0280304!10708-109H6;0.729655!12235-129G3;0.489385!12236-129G4;0.690882!12237-129G5;0.481714!10167-103B5;0.678284!10151-102I7;0.524838!10428-106D5;0.66956!10795-110I3;0.443121!10805-111A4;0.475799!10052-101G7;0.158954!10189-103D9;0.0810306!10589-108D4;0.0854627!10425-106D2;0.795773!10427-106D4;0.0538705!10702-109G9;0.340057!10432-106D9;0.803363!10496-107C1;0.746495!10718-109I7;0.353639!10011-101C2;0.871571!10053-101G8;0.0876453!10686-109F2;0.374601!10084-102B3;0.458485!10012-101C3;0.653951!10085-102B4;0.530631!10482-107A5;0.878327!10419-106C5;0.0948287!10080-102A8;0.979224!10760-110E4;0.000216384!10709-109H7;0.790346!10710-109H8;0.628187!10703-109H1;0.811892!10719-109I8;0.625905!10642-109A3;0.611295!10177-103C6;0.450423!10164-103B2;0.995348!10173-103C2;0.907768!10166-103B4;0.862564!10083-102B2;0.879376!10188-103D8;0.972448!10552-107I3;0.62143!10553-107I4;0.468959!10013-101C4;0.742552!10536-107G5;0.67681!10618-108G6;0.953787!10423-106C9;0.641924!10785-110H2;0.416709!12238-129G6;0.742158!12239-129G7;0.0614784!12240-129G8;0.84307!10416-106C2;0.209231!10801-110I9;0.218622!10766-110F1;0.752411!10824-111C5;0.713334!10825-111C6;0.167406!10826-111C7;0.201994!10454-106G4;0.133863!10409-106B4;0.180372!10638-108I8;0.437531!10636-108I6;0.6983!10513-107D9;0.901124!10420-106C6;0.633178!10082-102B1;0.432932!10014-101C5;0.032211!10070-101I7;0.0265518!10452-106G2;0.0150331!10453-106G3;0.18497!10449-106F8;0.233344!10042-101F6;0.236108!10069-101I6;0.88412!10193-103E4;0.262953!10631-108I1;0.763255!10438-106E6;0.342684!10488-107B2;0.491338!10196-103E7;0.283598!10071-101I8;0.096246!10071-101I8;0.0817694!10041-101F5;0.642539!10451-106G1;0.618567!10450-106F9;0.579347!10604-108F1;0.968306!10605-108F2;0.330081!10606-108F3;0.682467!10603-108E9;0.520568!10497-107C2;0.329736!10448-106F7;0.950414!10643-109A4;0.0165324!10426-106D3;0.868029!10431-106D8;0.585531!10197-103E8;0.617586!10443-106F2;0.269254!10815-111B5;0.21767!10816-111B6;0.231625!10817-111B7;0.284783!10015-101C6;0.249397!10410-106B5;0.199395!10054-101G9;0.0863282!10758-110E2;0.587244!10711-109H9;0.2016!10040-101F4;0.98644!10470-106I2;0.543885!10415-106C1;0.903955!10198-103E9;0.867746!10614-108G2;0.0631012!10612-108F9;0.63764!10549-107H9;0.986073!10615-108G3;0.133222!10487-107B1;0.791611!10433-106E1;0.908993!10688-109F4;0.189145!10444-106F3;0.926364!10444-106F3;0.0366882!10485-107A8;0.021843!10413-106B8;0.750104!10175-103C4;0.104108!10161-103A8;0.935375!12131-128D7;0.900345!10624-108H3;0.926041!10712-109I1;0.576424!10205-103F7;0.241402!10206-103F8;0.444921!10207-103F9;0.680247!10050-101G5;0.0303552!10051-101G6;0.0970602!10016-101C7;0.326836!10046-101G1;0.108149!10778-110G4;0.59459!10633-108I3;0.820842!10818-111B8;0.628162!10819-111B9;0.300107!10820-111C1;0.365984!10484-107A7;0.325075!10808-111A7;0.418446!10169-103B7;0.652608!10153-102I9;0.715961!13425-144D5;0.779987!13433-144E4;0.599549!13437-144E8;0.885041!11904-125F5;0.90851!11905-125F6;0.548414!10039-101F3;0.549278!10791-110H8;0.588899!10017-101C8;0.767954!10045-101F9;0.00246588!10509-107D5;0.100822!10839-111E2;0.378804!10692-109F8;0.32714!10079-102A7;0.814998!10078-102A6;0.181387!10721-110A1;0.140913!10569-108B2;0.426517!10570-108B3;0.746201!10571-108B4;0.979747!10647-109A8;0.869459!10752-110D5;0.317461!10782-110G8;0.244252!10726-110A6;0.0237455!10018-101C9;0.557349!10086-102B5;0.000443753!10182-103D2;0.128856!10165-103B3;0.764762!10499-107C4;0.78924!10408-106B3;0.855261!10019-101D1;0.702143!10068-101I5;0.000155367!10075-102A3;0.110646!10077-102A5;9.87186e-06!10727-110A7;0.0595847!10775-110G1;0.736041!10412-106B7;0.520616!12231-129F8;0.498586!12232-129F9;0.00133185!12233-129G1;0.0116179!12234-129G2;0.0155721!10414-106B9;0.00382975!10170-103B8;0.490221!10183-103D3;0.499252!10150-102I6;0.535961!10174-103C3;0.651738!10155-103A2;0.803813!10038-101F2;0.991448!10838-111E1;0.872185!10759-110E3;0.310004!10514-107E1;0.273221!10465-106H6;0.347512!10691-109F7;0.92577!10843-111E6;0.403093!10844-111E7;0.17631!11747-123G1;0.41189!11748-123G2;0.56981!11749-123G3;0.908249!11750-123G4;0.544252!11751-123G5;0.354008!11840-124H4;0.703836!11752-123G6;0.737577!11753-123G7;0.551939!11754-123G8;0.638611!11755-123G9;0.675993!11756-123H1;0.369687!11833-124G6;0.447448!11760-123H5;0.712487!11836-124G9;0.725512!11758-123H3;0.590138!11835-124G8;0.700014!11762-123H7;0.820087!11838-124H2;0.772631!11757-123H2;0.798016!11759-123H4;0.856062!11761-123H6;0.684161!11842-124H6;0.525419!11837-124H1;0.13471!10568-108B1;0.962606!13230-141I8;0.827176!13231-141I9;0.679086!10696-109G3;0.651374!10493-107B7;0.928432!10494-107B8;0.258797!10850-111F4;0.431673!10851-111F5;0.000796783!10852-111F6;0.448066!10853-111F7;0.16048!10854-111F8;0.190589!10855-111F9;0.0951319!10856-111G1;0.990433!10847-111F1;0.577507!10846-111E9;0.919831!10848-111F2;0.623622!10845-111E8;0.205489!10857-111G2;0.293249!10858-111G3;0.415246!10156-103A3;0.977351!11901-125F2;0.656865!11902-125F3;0.124571!11903-125F4;0.128533!10689-109F5;0.34025!10648-109A9;0.300686!10784-110H1;0.665209!10744-110C6;0.938818!10772-110F7;0.354821!10474-106I6;0.897209!10600-108E6;0.381124!10684-109E9;0.113157!12226-129F3;0.602454!12227-129F4;0.573564!10508-107D4;0.346246!10539-107G8;0.339305!10607-108F4;0.0749428!10555-107I6;0.439304!10774-110F9;0.289056!10637-108I7;0.441691!10663-109C6;0.588415!10728-110A8;0.423475!10729-110A9;0.667204!10430-106D7;0.735538!10730-110B1;0.190713!10813-111B3;0.0836393!10812-111B2;0.894596!10037-101F1;0.756745!10172-103C1;0.721562!10163-103B1;0.611084!10076-102A4;0.695074!10073-102A1;0.538665!10036-101E9;0.735829!10195-103E6;0.599603!10277-104E7;0.569346!10434-106E2;0.913059!10550-107I1;0.169907!10545-107H5;0.847333!10544-107H4;0.563702!10704-109H2;0.65698!10510-107D6;0.0401775!10558-107I9;0.978619!10020-101D2;0.630297!10732-110B3;0.184516!10049-101G4;0.306229!10698-109G5;0.123173!10437-106E5;0.578225!10417-106C3;0.51031!10035-101E8;0.574824!10171-103B9;0.555377!10157-103A4;0.558984!10034-101E7;0.67487!10072-101I9;0.598423!10199-103F1;0.811403!10200-103F2;0.057229!10697-109G4;0.633312!10723-110A3;0.721003!10179-103C8;0.486074!10160-103A7;0.810987!10180-103C9;0.848387!10162-103A9;0.860491!10021-101D3;0.906514!10840-111E3;0.0953392!10706-109H4;0.435631!10033-101E6;0.981127!10032-101E5;0.434449!10490-107B4;0.509035!10439-106E7;0.855148!10022-101D4;0.759145!10176-103C5;0.159195!10469-106I1;0.819481!10067-101I4;0.700305!10411-106B6;0.962595!10471-106I3;0.558653!10030-101E3;0.912172!10475-106I7;0.347321!10787-110H4;0.645589!10477-106I9;0.0262738!10695-109G2;0.697066!11771-123I7;0.848361!11772-123I8;0.560765!11773-123I9;0.810393!10093-102C3;0.600771!10442-106F1;0.0297382!10442-106F1;0.900828!10201-103F3;0.894384!10639-108I9;0.119556!11843-124H7;0.204929!11841-124H5;0.948244!10693-109F9;0.497472!10436-106E4;0.73033!10483-107A6;0.909154!10282-104F3;0.793257!10023-101D5;0.693865!10066-101I3;0.291016!10065-101I2;0.769941!10800-110I8;0.636677!10610-108F7;0.697246!10841-111E4;0.99839!10541-107H1;0.498!10842-111E5;0.683284!10562-108A4;0.379107!10024-101D6;0.554046!10064-101I1;0.016992!10609-108F6;0.394753!10048-101G3;0.976075!10781-110G7;0.250884!10181-103D1;0.836052!10159-103A6;0.994666!10056-101H2;0.830027!10737-110B8;0.777505!10025-101D7;0.27608!10044-101F8;0.0968458!10424-106D1;0.262171!10463-106H4;0.133279!10616-108G4;0.997325!10486-107A9;0.802166!10062-101H8;0.663406!10202-103F4;0.161051!10158-103A5;0.134265!10441-106E9;0.960324!10031-101E4;0.510143!10063-101H9;0.592716!10063-101H9;0.686742!11763-123H8;0.542492!11765-123I1;0.753282!11768-123I4;0.717399!10807-111A6;0.697894!10790-110H7;0.552867!10798-110I6;0.677454!10786-110H3;0.392851!10591-108D6;0.61462!10593-108D8;0.654738!10590-108D5;0.910879!10026-101D8;0.772534!10096-102C6;0.149909!10168-103B6;0.462743!10154-103A1;0.94105!10209-103G2;0.925706!10061-101H7;0.549426!10027-101D9;0.890154!10043-101F7;0.728667!10783-110G9;0.428287!10028-101E1;0.706466!10060-101H6;0.308508!10203-103F5;0.988027!10059-101H5;0.465969!10047-101G2;0.247816!10029-101E2;0.127514!10058-101H4;0.0096447!10418-106C4;0.580951!10492-107B6;0.406684!10694-109G1;0.636516!10797-110I5;0.411766!10057-101H3;0.625284!10100-102D1;0.667237!10055-101H1;0.599279!10204-103F6;0.858663!10191-103E2;0.0836861!10563-108A5;0.202513
|name=TTCTTCAGCG,motif357,CNhs12850,T:990.0(26.36%),B:13463.2(18.12%),P:1e-35
|name=TTCTTCAGCG,motif357,CNhs12850,T:990.0(26.36%),B:13463.2(18.12%),P:1e-35
|tomtom_result=Mafb#MA0117.1;-1;0.00378112;1.79981;1;8;TTCTTCAGCG;GCGTCAGC;-!PHD1#MA0355.1;0;0.0105662;5.0295;1;10;TTCTTCAGCG;TGCTGCAGGT;-!id1#MA0120.1;2;0.0204426;9.73068;1;10;TTCTTCAGCG;TTTTCCTTTTCG;+
}}
}}

Latest revision as of 15:02, 7 September 2012

Full Name: TTCTTCAGCG,motif357,CNhs12850,T:990.0(26.36%),B:13463.2(18.12%),P:1e-35

Motif matrix
POACGT
141.5872.2756.43819.72
220.79102.9651.48814.77
357.42817.7436.6378.21
463.3676.2337.62812.79
569.385.1458.41777.15
662.37815.7660.3951.48
7867.2436.6338.6147.52
854.4544.55841.549.5
993.06698.94106.9291.08
10132.6681.18657.36118.8

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Mafb#MA0117.1-10.003781121.7998118TTCTTCAGCGGCGTCAGC-
PHD1#MA0355.100.01056625.0295110TTCTTCAGCGTGCTGCAGGT-
id1#MA0120.120.02044269.73068110TTCTTCAGCGTTTTCCTTTTCG+
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