Personal tools

FFCP PHASE1:Mm9::chr16:91011274..91011314,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr16:91011274..91011314,-
|id=chr16:91011274..91011314,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!6.54e-07!51;UBERON:0001049!8.99e-07!52;UBERON:0005068!8.99e-07!52;UBERON:0006241!8.99e-07!52;UBERON:0007135!8.99e-07!52
|ontology_enrichment_uberon=UBERON:0007023!6.54e-07!51;UBERON:0001049!8.99e-07!52;UBERON:0005068!8.99e-07!52;UBERON:0006241!8.99e-07!52;UBERON:0007135!8.99e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-07,54;UBERON:0007023,6.54e-07,51;UBERON:0001049,8.99e-07,52;UBERON:0005068,8.99e-07,52;UBERON:0006241,8.99e-07,52;UBERON:0007135,8.99e-07,52
|phase1_expression=6.56610273129655,18.8446720125255,24.5699589270349,32.061206398524,43.0770327753859,12.9267039372155,7.94282978024787,9.16775596435192,9.43284438416167,16.1504523162175,2.22583358693156,2.6324812468461,8.56003649656029,8.21751782738576,9.66018309265422,14.5782192520675,12.5921138063066,5.36285681109004,6.7186072466812,4.66828616977833,11.1406710097901,7.04965753526286,4.4403964153619,11.0394771727451,8.48814339948529,17.2269589234506,16.7997178502039,14.6520438226405,10.8313349090133,17.1380488236753,8.86922042621219,2.54012269383853,5.53558308826113,0,5.48818077527422,3.32469290716985,5.71674197534634,50.6423273191658,39.06676722619,34.5525671022707,65.8819266594736,56.692775251551,52.4351181273646,3.02152363141385,4.66333883609767,4.40512205188036,4.69434806608824,4.14247797122848,1.5378032791413,3.69416808241138,4.19959264876088,1.43752564364972,6.87908684836719,5.07753499407941,11.0910953717013,5.65970759279083,8.5960031981627,13.4074743992135,9.3065571995415,11.6378015439847,3.80298842103708,5.76035704517525,3.55717918444456,7.19919773825119,8.89979726310277,12.0781619540837,3.59520132622086,3.45796474789399,4.97710139080693,2.97013064329719,3.78584930432488,12.8542942981712,9.93908434282261,4.77714116938321,4.02550978276593,4.5960939330501,24.2254938198655,36.2632040161933,32.1037654505549,10.6827893061457,13.5401712531566,11.9810075228055,26.2432019061298,21.3849791812038,29.6428600687012,17.3830865429464,18.3659468230843,11.9295645328192,3.86203585999239,5.36558076758177,14.7830889237856,6.0229671388697,5.439770669662,5.93673510801599,3.89865850468601,3.13618820968135,4.77511028447956,5.79463096765396,4.93593408745451,4.94675404314476,4.22530259330042,15.3991772897181,17.8363667794652,35.5533351576666,4.5463118612355,3.29367825117628,4.54972000513305,9.81981365583916,19.6792791571851,9.35185476108396,5.03107447621794,5.1759131313064,5.76538743140146,4.97384713823654,5.29149182110672,4.90099706185734,19.7755974187499,10.4111536982336,11.4999371753484,4.69123864847487,9.49618529379692,14.0613823409214,14.9113408974498,21.958559775866,24.2958179903608,10.9846533739694,3.71426885968353,5.39912457894067,4.3203877204842,27.861058929297,16.4700217014706,4.90051973240171,32.1574992355711,27.105838477015,24.5189892580281,27.0942909323155,3.05518091550949,7.58882520721567,4.54900965180614,9.46988351489133,2.99277018814219,2.06911893990126,4.32149111532838,5.12396380641431,7.75616090325138,9.09607414022434,7.12133106653939,12.1590584247337,3.01795190105979,2.26927296201383,2.63926686245923,1.7535658594206,4.17070873838397,3.83077383174383,2.46938563689532,2.58744546864041,7.02213187313235,4.88961023517959,5.39910648851626,4.14251545071004,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,2.93107514486019,5.8133486187602,2.95100741539581,7.70651259623319,7.40519324610662,5.74586124276833,7.37726166867287,6.87139940899062,8.78200461164202,9.39444931322602,31.1229123874908,5.35103984372279,15.8601015832223,10.8424732332053,1.91959425481711,2.55460339046482,4.76809606891745,11.8993279527772,11.7860363237781,7.98947629672748,12.8122846617018,11.8583247401288,17.0907941984183,17.5081695396213,16.5719474051252,13.4822911298133,17.0749059401008,16.1304431336037,1.13800740571849,3.88444942873078,4.50830942692322,4.48032921259691,2.90928730751439,6.10181633045771,7.77809406628365,10.0374900626129,6.59394656933774,9.25478729413504,7.41131567717872,4.00428253718626,7.46924181430171,9.89393294493356,7.1001042485976,11.3353265083636,7.89340140522401,7.76779571117189,9.24170792617702,5.76578967694971,4.31304619582064,5.20997326735905,6.86482880852033,6.06189307073068,3.58794827043824,6.75420929908714,13.3022296919955,2.08440552947533,3.09633455239849,3.39490171550376,4.45911471748154,7.20276906999808,7.85544014923845,12.4885534628991,12.2955412402829,8.19419351700467,8.6105575075043,11.3065687153859,12.0879487306127,12.729117155173,28.6503439484617,35.3538694482161,4.42587845717133,4.13905119457099,23.7614873181932,26.9586879162067,1.14754461763673,6.05930225290495,2.2085575359138,2.73307121007647,7.75524231838076,2.38968797952552,3.7875774594007,5.94460714656548,5.66734982344852,7.3063964477828,7.90575555893047,21.8498495166829,6.24536374916382,1.95872164033981,4.23506094319298,8.08353602565424,3.98235415019888,0.971122544619926,2.11626489875326,2.26326095707078,2.95301892880773,6.7635732547664,9.04499026088774,6.5436071305951,8.55593708123331,7.58488219045958,7.37930260024991,6.18813259489121,14.6389030474129,3.24109969256358,3.75140182969988,4.28674070063185,6.91626911204867,7.66985915688903,5.92376474167636,6.69822888052118,5.86679270159276,6.14313005505079,6.17479514553893,7.58476763530808,4.52100394748536,4.644095219468,5.01363844813173,5.41664969158702,18.0718118710507,23.1781627513137,10.9357363710626,4.95328483111734,6.66700298530962,10.5486335922627,10.1153728513559,10.7525741407066,5.26933132980952,5.87796099759364,4.69879910935041,1.90934123603023,1.73984796469624,4.87966721104437,3.67218158794124,4.59994251231831,3.71216358368502,5.39457385539283,6.52962300230154,7.0674104335688,18.5349411807264,6.83473244395618,2.81846469342095,2.0932316446157,1.98550188548517,2.33341426012857,1.93739735216597,2.70329800785245,3.16864544343536,3.1249052362548,2.51662426621706,3.62376181239009,2.88030006257865,7.2682557744481,2.22997736819181,2.56777392912068,2.07873316764472,2.8644271306797,3.57626438606277,3.96644983415897,4.28299628806274,4.34155734777035,2.43861781295999,3.83139503519994,5.75001496364539,5.00301576529713,5.84384510907845,4.30787728868902,3.10780334723691,4.66512054369274,4.36500002546604,9.07991091951295,9.75948872346146,9.34073283763052,7.07415650960917,7.02200945649509,20.8958181768315,18.8733346967943,16.6139698897425,21.997207339992,26.718218271055,29.4603619981983,24.300810008345,22.9663813644352,22.6571204492102,28.4768171463501,2.80225838477277,5.58634822761443,3.58540572083682,5.83456120963906,3.98265008993166,3.8607136774503,4.22268782823069,7.2112270033613,8.66481865897901,6.57012750585873,7.35089969681695,6.60192194851267,6.74218853783153,6.08238947846258,6.54764346093991,8.09699275181225,6.95305955669133,5.01563973205633,9.89006161927936,6.32955356577908,5.82877729055206,6.74408063405482,7.39152188836695,5.66851024866081,6.02300034658116,6.59993941555077,6.21955107767427,7.62902163169744,6.24698923690964,7.2948495315506,7.11810108745045,6.99381824866501,6.13846564754534,8.83139994760006,5.20847849649082,3.2475375131933,5.14649538579898,4.94203424311086,4.59091996965224,4.85301122062934,6.26043156175138
|phase1_expression=6.56610273129655,18.8446720125255,24.5699589270349,32.061206398524,43.0770327753859,12.9267039372155,7.94282978024787,9.16775596435192,9.43284438416167,16.1504523162175,2.22583358693156,2.6324812468461,8.56003649656029,8.21751782738576,9.66018309265422,14.5782192520675,12.5921138063066,5.36285681109004,6.7186072466812,4.66828616977833,11.1406710097901,7.04965753526286,4.4403964153619,11.0394771727451,8.48814339948529,17.2269589234506,16.7997178502039,14.6520438226405,10.8313349090133,17.1380488236753,8.86922042621219,2.54012269383853,5.53558308826113,0,5.48818077527422,3.32469290716985,5.71674197534634,50.6423273191658,39.06676722619,34.5525671022707,65.8819266594736,56.692775251551,52.4351181273646,3.02152363141385,4.66333883609767,4.40512205188036,4.69434806608824,4.14247797122848,1.5378032791413,3.69416808241138,4.19959264876088,1.43752564364972,6.87908684836719,5.07753499407941,11.0910953717013,5.65970759279083,8.5960031981627,13.4074743992135,9.3065571995415,11.6378015439847,3.80298842103708,5.76035704517525,3.55717918444456,7.19919773825119,8.89979726310277,12.0781619540837,3.59520132622086,3.45796474789399,4.97710139080693,2.97013064329719,3.78584930432488,12.8542942981712,9.93908434282261,4.77714116938321,4.02550978276593,4.5960939330501,24.2254938198655,36.2632040161933,32.1037654505549,10.6827893061457,13.5401712531566,11.9810075228055,26.2432019061298,21.3849791812038,29.6428600687012,17.3830865429464,18.3659468230843,11.9295645328192,3.86203585999239,5.36558076758177,14.7830889237856,6.0229671388697,5.439770669662,5.93673510801599,3.89865850468601,3.13618820968135,4.77511028447956,5.79463096765396,4.93593408745451,4.94675404314476,4.22530259330042,15.3991772897181,17.8363667794652,35.5533351576666,4.5463118612355,3.29367825117628,4.54972000513305,9.81981365583916,19.6792791571851,9.35185476108396,5.03107447621794,5.1759131313064,5.76538743140146,4.97384713823654,5.29149182110672,4.90099706185734,19.7755974187499,10.4111536982336,11.4999371753484,4.69123864847487,9.49618529379692,14.0613823409214,14.9113408974498,21.958559775866,24.2958179903608,10.9846533739694,3.71426885968353,5.39912457894067,4.3203877204842,27.861058929297,16.4700217014706,4.90051973240171,32.1574992355711,27.105838477015,24.5189892580281,27.0942909323155,3.05518091550949,7.58882520721567,4.54900965180614,9.46988351489133,2.99277018814219,2.06911893990126,4.32149111532838,5.12396380641431,7.75616090325138,9.09607414022434,7.12133106653939,12.1590584247337,3.01795190105979,2.26927296201383,2.63926686245923,1.7535658594206,4.17070873838397,3.83077383174383,2.46938563689532,2.58744546864041,7.02213187313235,4.88961023517959,5.39910648851626,4.14251545071004,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,2.93107514486019,5.8133486187602,2.95100741539581,7.70651259623319,7.40519324610662,5.74586124276833,7.37726166867287,6.87139940899062,8.78200461164202,9.39444931322602,31.1229123874908,5.35103984372279,15.8601015832223,10.8424732332053,1.91959425481711,2.55460339046482,4.76809606891745,11.8993279527772,11.7860363237781,7.98947629672748,12.8122846617018,11.8583247401288,17.0907941984183,17.5081695396213,16.5719474051252,13.4822911298133,17.0749059401008,16.1304431336037,1.13800740571849,3.88444942873078,4.50830942692322,4.48032921259691,2.90928730751439,6.10181633045771,7.77809406628365,10.0374900626129,6.59394656933774,9.25478729413504,7.41131567717872,4.00428253718626,7.46924181430171,9.89393294493356,7.1001042485976,11.3353265083636,7.89340140522401,7.76779571117189,9.24170792617702,5.76578967694971,4.31304619582064,5.20997326735905,6.86482880852033,6.06189307073068,3.58794827043824,6.75420929908714,13.3022296919955,2.08440552947533,3.09633455239849,3.39490171550376,4.45911471748154,7.20276906999808,7.85544014923845,12.4885534628991,12.2955412402829,8.19419351700467,8.6105575075043,11.3065687153859,12.0879487306127,12.729117155173,28.6503439484617,35.3538694482161,4.42587845717133,4.13905119457099,23.7614873181932,26.9586879162067,1.14754461763673,6.05930225290495,2.2085575359138,2.73307121007647,7.75524231838076,2.38968797952552,3.7875774594007,5.94460714656548,5.66734982344852,7.3063964477828,7.90575555893047,21.8498495166829,6.24536374916382,1.95872164033981,4.23506094319298,8.08353602565424,3.98235415019888,0.971122544619926,2.11626489875326,2.26326095707078,2.95301892880773,6.7635732547664,9.04499026088774,6.5436071305951,8.55593708123331,7.58488219045958,7.37930260024991,6.18813259489121,14.6389030474129,3.24109969256358,3.75140182969988,4.28674070063185,6.91626911204867,7.66985915688903,5.92376474167636,6.69822888052118,5.86679270159276,6.14313005505079,6.17479514553893,7.58476763530808,4.52100394748536,4.644095219468,5.01363844813173,5.41664969158702,18.0718118710507,23.1781627513137,10.9357363710626,4.95328483111734,6.66700298530962,10.5486335922627,10.1153728513559,10.7525741407066,5.26933132980952,5.87796099759364,4.69879910935041,1.90934123603023,1.73984796469624,4.87966721104437,3.67218158794124,4.59994251231831,3.71216358368502,5.39457385539283,6.52962300230154,7.0674104335688,18.5349411807264,6.83473244395618,2.81846469342095,2.0932316446157,1.98550188548517,2.33341426012857,1.93739735216597,2.70329800785245,3.16864544343536,3.1249052362548,2.51662426621706,3.62376181239009,2.88030006257865,7.2682557744481,2.22997736819181,2.56777392912068,2.07873316764472,2.8644271306797,3.57626438606277,3.96644983415897,4.28299628806274,4.34155734777035,2.43861781295999,3.83139503519994,5.75001496364539,5.00301576529713,5.84384510907845,4.30787728868902,3.10780334723691,4.66512054369274,4.36500002546604,9.07991091951295,9.75948872346146,9.34073283763052,7.07415650960917,7.02200945649509,20.8958181768315,18.8733346967943,16.6139698897425,21.997207339992,26.718218271055,29.4603619981983,24.300810008345,22.9663813644352,22.6571204492102,28.4768171463501,2.80225838477277,5.58634822761443,3.58540572083682,5.83456120963906,3.98265008993166,3.8607136774503,4.22268782823069,7.2112270033613,8.66481865897901,6.57012750585873,7.35089969681695,6.60192194851267,6.74218853783153,6.08238947846258,6.54764346093991,8.09699275181225,6.95305955669133,5.01563973205633,9.89006161927936,6.32955356577908,5.82877729055206,6.74408063405482,7.39152188836695,5.66851024866081,6.02300034658116,6.59993941555077,6.21955107767427,7.62902163169744,6.24698923690964,7.2948495315506,7.11810108745045,6.99381824866501,6.13846564754534,8.83139994760006,5.20847849649082,3.2475375131933,5.14649538579898,4.94203424311086,4.59091996965224,4.85301122062934,6.26043156175138
|short_description=p1@Synj1
|short_description=p1@Synj1
}}
}}

Revision as of 13:38, 13 November 2012

Short description:p1@Synj1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Synj1_5end
Coexpression cluster:MCL_coexpression_mm9:1585
Association with transcript: 0bp_to_ENSMUST00000118246, ENSMUST00000130813, ENSMUST00000156140_5end
EntrezGene:Synj1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Synj1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.57
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.06
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I116.80
GP2+ M cell, pool3.CNhs13240.11847-124I214.65
Ileum epithelium, pool1.CNhs13199.10252-104B910.83
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G850.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G965.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H452.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F95.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.82
accessory axillary lymph node, adult.CNhs10475.1063-29H919.68
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H110.41
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A427.86
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D532.16
cortex, neonate N30.CNhs11107.1392-42F227.11
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E37.71
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D29.39
hippocampus, adult.CNhs10478.13-16E831.12
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D311.79
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E911.86
intestine, neonate N06.CNhs11102.688-20B817.09
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A516.57
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E317.07
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G76.10
kidney, neonate N10.CNhs11206.758-6D57.78
kidney, neonate N20.CNhs11113.832-19I110.04
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H67.47
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A38.19
lung, neonate N10.CNhs11219.750-23E68.61
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H212.73
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A135.35
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C223.76
medulla oblongata, neonate N30.CNhs11200.1396-42A326.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F67.67
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C37.58
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I118.07
spinal cord, adult.CNhs10505.24-13C923.18
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H110.12
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A96.53
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I118.53
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G75.00
thymus, neonate N30.CNhs11132.1393-42G25.84
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.48
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.07e-0754
adult organism6.54e-0751
neural tube8.99e-0752
neural rod8.99e-0752
future spinal cord8.99e-0752
neural keel8.99e-0752







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:91011274..91011314,-&oldid=2257449"