FFCP PHASE1:Mm9::chr12:56937352..56937395,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:56937352..56937395,+ | |id=chr12:56937352..56937395,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.32e-10!94;UBERON:0007811!1.53e-09!86;UBERON:0002346!3.55e-09!71;UBERON:0003075!3.55e-09!71;UBERON:0007284!3.55e-09!71;UBERON:0001017!4.45e-08!73;UBERON:0005743!4.45e-08!73;UBERON:0000955!5.15e-08!50;UBERON:0006238!5.15e-08!50;UBERON:0001049!7.10e-08!52;UBERON:0005068!7.10e-08!52;UBERON:0006241!7.10e-08!52;UBERON:0007135!7.10e-08!52;UBERON:0000073!7.92e-08!75;UBERON:0001016!7.92e-08!75;UBERON:0002616!1.37e-07!49;UBERON:0004121!6.71e-07!102;UBERON:0000924!6.71e-07!102;UBERON:0006601!6.71e-07!102;UBERON:0002020!6.97e-07!34 | |ontology_enrichment_uberon=UBERON:0000153!3.32e-10!94;UBERON:0007811!1.53e-09!86;UBERON:0002346!3.55e-09!71;UBERON:0003075!3.55e-09!71;UBERON:0007284!3.55e-09!71;UBERON:0001017!4.45e-08!73;UBERON:0005743!4.45e-08!73;UBERON:0000955!5.15e-08!50;UBERON:0006238!5.15e-08!50;UBERON:0001049!7.10e-08!52;UBERON:0005068!7.10e-08!52;UBERON:0006241!7.10e-08!52;UBERON:0007135!7.10e-08!52;UBERON:0000073!7.92e-08!75;UBERON:0001016!7.92e-08!75;UBERON:0002616!1.37e-07!49;UBERON:0004121!6.71e-07!102;UBERON:0000924!6.71e-07!102;UBERON:0006601!6.71e-07!102;UBERON:0002020!6.97e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-08,54;UBERON:0001017,4.45e-08,73;UBERON:0001049,7.10e-08,52;UBERON:0005068,7.10e-08,52;UBERON:0006241,7.10e-08,52;UBERON:0007135,7.10e-08,52;UBERON:0001016,7.92e-08,75;UBERON:0002346,9.51e-08,64;UBERON:0003075,9.51e-08,64;UBERON:0007284,9.51e-08,64;UBERON:0010314,1.41e-07,92;UBERON:0010371,3.32e-07,73;UBERON:0002020,6.97e-07,34;UBERON:0000955,7.04e-07,47;UBERON:0006238,7.04e-07,47 | |||
|phase1_expression=12.6517589212787,2.09385244583617,5.0049916332849,5.14189159221611,4.00716583957078,6.88305014838748,4.90586545250604,11.879345756625,9.85521055061667,10.0647746318457,9.93064215707929,9.49288692044503,11.2992481754596,12.6759583507546,9.99329285446988,13.5658429151183,13.9912375625629,9.62159604342625,9.04955261797876,9.33657233955666,9.86502165752409,8.14185799847259,7.05239430675126,2.87986361028132,3.21172993494038,1.72269589234506,1.29228598847722,3.01659725760245,2.47030445293286,1.51218077855958,3.99114919179548,4.44521471421742,5.53558308826113,0,3.17736781726402,2.82598897109437,6.32925004413344,1.67412652294763,3.1253413780952,6.80580867165938,4.1176204162171,2.73218193983378,2.91306211818692,5.16176953699867,6.2853697356099,6.42413632565885,5.47673941043627,5.45062890951116,2.85592037554813,7.58276606389705,6.01941612989059,7.18762821824858,15.1004345451963,14.5072428402269,14.1159395639835,4.63066984864705,10.3152038377952,6.18806510732931,10.9250888864183,5.81890077199236,8.87363964908651,4.06613438482959,0.889294796111139,1.7997994345628,0,0.7104801149461,1.79760066311043,2.68952813725088,10.6800300677732,8.23536223823313,10.9368979902719,10.5690864229407,10.3808214247258,10.9016811301309,11.0222291670972,11.9498442259303,11.0115880999389,16.98241596533,15.6678663921368,9.36392642884376,12.7167824607349,16.1483144872596,12.0048689570594,16.8828783009504,13.5990440521361,11.7851434189467,15.3761415263031,10.8111678578674,6.89108359331975,9.3708734532414,10.4351215932604,4.30211938490693,2.03991400112325,2.15881276655127,6.49776417447669,4.92829575807069,5.19644354487482,12.7822741933543,13.768658243952,7.42013106471715,9.29566570526091,15.3991772897181,53.5091003383956,71.1066703153331,2.16491041011214,5.06719730950197,8.59391556525132,4.45317130904334,11.1343289968284,9.79718117827843,12.6644288539279,7.91610243611567,12.4532368518272,12.8114244469729,12.346814249249,12.8179923156269,4.94389935468748,5.06097749219691,2.65383165584962,9.38247729694973,8.83366073841574,6.30337829075789,1.86391761218122,14.3462590535658,13.6140359428746,1.78819938646014,3.71426885968353,5.39912457894067,3.81210681219194,9.8861822007183,9.60751265919116,15.2041766056566,13.5582969749976,16.6215047264715,15.9996794310861,15.5751612545047,10.6931332042832,11.0722203842983,4.54900965180614,4.62972082950243,9.49879233627737,9.19608417733892,8.10279584124071,7.9873553452929,10.3415478710018,11.1458936647819,10.8694000489285,7.24369438069244,6.89817577385095,11.9136830505726,10.205165201509,11.3981780862339,11.9560317167007,7.66154766348766,9.4659782747654,11.9420560091096,2.1066395619397,4.37491442095016,3.12579849335152,6.62802472113606,5.62862543954631,8.10279276574567,7.57583153872673,6.09969118416952,9.41029388613007,12.7893669612724,8.85302224618743,7.70651259623319,10.3672705445493,11.6558899496158,9.07970666913584,9.64919917007193,9.00155472693308,10.6023070820694,11.3556572224629,12.657267322652,1.98251269790279,2.90895623329899,9.38468302355029,10.4506502337197,7.7320476793256,6.25218926332362,3.33567065767305,4.37518940058886,4.2707615539006,3.45867804920423,6.53471542880701,4.17808591286417,6.62877896205008,7.19055526923377,3.6743468478698,3.18626037206988,5.87970492954553,8.22589290790047,7.88954149711563,8.14605311381257,7.75809948670503,7.78507600782536,10.3707920883782,8.70899873079653,8.79192875911699,7.65062416315163,2.66807364378434,10.3443965543978,6.09332884850929,4.72210436008193,3.85434230638156,4.10001171579109,6.87489799809833,6.32931502391783,3.56697498905078,2.47105271869273,14.3768206527355,2.97712758134803,4.99260276983297,2.77836765741823,3.58794827043824,0.964887042726734,6.65111484599777,9.28507917675375,14.1779529504563,10.1847051465113,17.6017686216377,12.2279567932526,9.04565835366852,11.5128852236101,13.3989872490262,13.9522754478728,13.2347457985714,10.4872521418072,9.32498902075836,9.9807850421243,9.04747703635634,4.35124547054968,6.39293554924747,6.89841865761831,14.4495530989013,13.0104972117346,13.2787305755107,12.1186045058099,10.0962630213202,10.9322848403059,12.9254038639679,11.2315335037699,9.13474563737816,13.587673477864,6.8817819284732,8.18316402151673,7.51046778098395,13.8168166061377,10.5035663054119,8.54714897602825,9.61033060186099,6.43383479592888,5.30980553359851,7.04063844849446,5.44182402536552,6.41257271170054,3.2483208216885,7.07100840271033,9.04499026088774,7.27067458955011,6.77345018930971,7.26884543252377,6.32511651449993,5.15677716240934,7.14923172082955,10.443543453816,6.20921682157222,9.64516657642165,11.3497749531055,8.38333442729732,9.05019613311665,5.48036908406279,11.0295702789944,10.8034356140548,5.29268155331909,10.2229476823718,10.6566521619298,7.90099316558842,7.99794704821014,7.55048138827282,5.53813589596716,13.1651964427462,7.17657699350981,9.28740905834501,11.2968661695524,8.66494902221579,11.2089266731241,7.0921233694022,3.22959016988325,2.79902904647316,3.45499934511059,8.59203556213602,8.54107182669065,7.72613975082025,11.1245501046455,7.94535524854981,8.07941485860857,8.22672512947406,6.52962300230154,9.16145796944104,5.18459893167171,1.24267862617385,10.1464728963154,12.8584229597822,10.9202603701684,10.8892665472667,11.2369046425626,8.95467465101124,9.85800804624333,12.6298253298632,12.0588246089567,14.4950472495604,14.4015003128933,8.53230025696081,7.70355818102624,5.75181360123033,5.97635785697857,9.667441566044,7.74857283646933,9.61563596159751,10.9290250109187,15.3469003921184,13.641018391245,12.8049255123787,10.233077477674,13.1810223047251,14.1421051639698,2.94749498699775,6.88156455459601,12.5599399253266,11.9198077618496,6.18206700903009,4.69206188627955,5.67770035228522,4.50173596066038,4.01257683228291,12.4245405375755,13.3494318587081,13.7494923225455,13.0608418581203,11.6464028361009,10.5755145634558,10.8003600037089,9.90706647093285,10.8754178156209,6.21312374102184,12.350694362517,7.18244772121856,8.87814749921498,11.6691224192781,11.1094976192831,10.2952364732008,8.88986911206461,10.0957178047058,9.30665707816264,10.8659801058433,9.12525479604863,10.3744487762342,13.1098110457835,10.8842759088278,12.4060612944125,10.4784612082276,11.240779616651,11.3816440073586,17.7196937345422,9.12633304833263,10.6289468239479,12.7782580434723,9.0605752179982,13.0811774969096,11.669563171501,12.6921911837515,11.7073902638574,11.3119975918272,12.9013908153569,11.2228454331548,13.0498519936592,12.9040871911988,9.82154503607254,10.3807683594597,9.06661071611365,5.49583271463481,6.08222181958062,5.37177635120746,8.41668661102911,7.27951683094401,9.50658126043728 | |phase1_expression=12.6517589212787,2.09385244583617,5.0049916332849,5.14189159221611,4.00716583957078,6.88305014838748,4.90586545250604,11.879345756625,9.85521055061667,10.0647746318457,9.93064215707929,9.49288692044503,11.2992481754596,12.6759583507546,9.99329285446988,13.5658429151183,13.9912375625629,9.62159604342625,9.04955261797876,9.33657233955666,9.86502165752409,8.14185799847259,7.05239430675126,2.87986361028132,3.21172993494038,1.72269589234506,1.29228598847722,3.01659725760245,2.47030445293286,1.51218077855958,3.99114919179548,4.44521471421742,5.53558308826113,0,3.17736781726402,2.82598897109437,6.32925004413344,1.67412652294763,3.1253413780952,6.80580867165938,4.1176204162171,2.73218193983378,2.91306211818692,5.16176953699867,6.2853697356099,6.42413632565885,5.47673941043627,5.45062890951116,2.85592037554813,7.58276606389705,6.01941612989059,7.18762821824858,15.1004345451963,14.5072428402269,14.1159395639835,4.63066984864705,10.3152038377952,6.18806510732931,10.9250888864183,5.81890077199236,8.87363964908651,4.06613438482959,0.889294796111139,1.7997994345628,0,0.7104801149461,1.79760066311043,2.68952813725088,10.6800300677732,8.23536223823313,10.9368979902719,10.5690864229407,10.3808214247258,10.9016811301309,11.0222291670972,11.9498442259303,11.0115880999389,16.98241596533,15.6678663921368,9.36392642884376,12.7167824607349,16.1483144872596,12.0048689570594,16.8828783009504,13.5990440521361,11.7851434189467,15.3761415263031,10.8111678578674,6.89108359331975,9.3708734532414,10.4351215932604,4.30211938490693,2.03991400112325,2.15881276655127,6.49776417447669,4.92829575807069,5.19644354487482,12.7822741933543,13.768658243952,7.42013106471715,9.29566570526091,15.3991772897181,53.5091003383956,71.1066703153331,2.16491041011214,5.06719730950197,8.59391556525132,4.45317130904334,11.1343289968284,9.79718117827843,12.6644288539279,7.91610243611567,12.4532368518272,12.8114244469729,12.346814249249,12.8179923156269,4.94389935468748,5.06097749219691,2.65383165584962,9.38247729694973,8.83366073841574,6.30337829075789,1.86391761218122,14.3462590535658,13.6140359428746,1.78819938646014,3.71426885968353,5.39912457894067,3.81210681219194,9.8861822007183,9.60751265919116,15.2041766056566,13.5582969749976,16.6215047264715,15.9996794310861,15.5751612545047,10.6931332042832,11.0722203842983,4.54900965180614,4.62972082950243,9.49879233627737,9.19608417733892,8.10279584124071,7.9873553452929,10.3415478710018,11.1458936647819,10.8694000489285,7.24369438069244,6.89817577385095,11.9136830505726,10.205165201509,11.3981780862339,11.9560317167007,7.66154766348766,9.4659782747654,11.9420560091096,2.1066395619397,4.37491442095016,3.12579849335152,6.62802472113606,5.62862543954631,8.10279276574567,7.57583153872673,6.09969118416952,9.41029388613007,12.7893669612724,8.85302224618743,7.70651259623319,10.3672705445493,11.6558899496158,9.07970666913584,9.64919917007193,9.00155472693308,10.6023070820694,11.3556572224629,12.657267322652,1.98251269790279,2.90895623329899,9.38468302355029,10.4506502337197,7.7320476793256,6.25218926332362,3.33567065767305,4.37518940058886,4.2707615539006,3.45867804920423,6.53471542880701,4.17808591286417,6.62877896205008,7.19055526923377,3.6743468478698,3.18626037206988,5.87970492954553,8.22589290790047,7.88954149711563,8.14605311381257,7.75809948670503,7.78507600782536,10.3707920883782,8.70899873079653,8.79192875911699,7.65062416315163,2.66807364378434,10.3443965543978,6.09332884850929,4.72210436008193,3.85434230638156,4.10001171579109,6.87489799809833,6.32931502391783,3.56697498905078,2.47105271869273,14.3768206527355,2.97712758134803,4.99260276983297,2.77836765741823,3.58794827043824,0.964887042726734,6.65111484599777,9.28507917675375,14.1779529504563,10.1847051465113,17.6017686216377,12.2279567932526,9.04565835366852,11.5128852236101,13.3989872490262,13.9522754478728,13.2347457985714,10.4872521418072,9.32498902075836,9.9807850421243,9.04747703635634,4.35124547054968,6.39293554924747,6.89841865761831,14.4495530989013,13.0104972117346,13.2787305755107,12.1186045058099,10.0962630213202,10.9322848403059,12.9254038639679,11.2315335037699,9.13474563737816,13.587673477864,6.8817819284732,8.18316402151673,7.51046778098395,13.8168166061377,10.5035663054119,8.54714897602825,9.61033060186099,6.43383479592888,5.30980553359851,7.04063844849446,5.44182402536552,6.41257271170054,3.2483208216885,7.07100840271033,9.04499026088774,7.27067458955011,6.77345018930971,7.26884543252377,6.32511651449993,5.15677716240934,7.14923172082955,10.443543453816,6.20921682157222,9.64516657642165,11.3497749531055,8.38333442729732,9.05019613311665,5.48036908406279,11.0295702789944,10.8034356140548,5.29268155331909,10.2229476823718,10.6566521619298,7.90099316558842,7.99794704821014,7.55048138827282,5.53813589596716,13.1651964427462,7.17657699350981,9.28740905834501,11.2968661695524,8.66494902221579,11.2089266731241,7.0921233694022,3.22959016988325,2.79902904647316,3.45499934511059,8.59203556213602,8.54107182669065,7.72613975082025,11.1245501046455,7.94535524854981,8.07941485860857,8.22672512947406,6.52962300230154,9.16145796944104,5.18459893167171,1.24267862617385,10.1464728963154,12.8584229597822,10.9202603701684,10.8892665472667,11.2369046425626,8.95467465101124,9.85800804624333,12.6298253298632,12.0588246089567,14.4950472495604,14.4015003128933,8.53230025696081,7.70355818102624,5.75181360123033,5.97635785697857,9.667441566044,7.74857283646933,9.61563596159751,10.9290250109187,15.3469003921184,13.641018391245,12.8049255123787,10.233077477674,13.1810223047251,14.1421051639698,2.94749498699775,6.88156455459601,12.5599399253266,11.9198077618496,6.18206700903009,4.69206188627955,5.67770035228522,4.50173596066038,4.01257683228291,12.4245405375755,13.3494318587081,13.7494923225455,13.0608418581203,11.6464028361009,10.5755145634558,10.8003600037089,9.90706647093285,10.8754178156209,6.21312374102184,12.350694362517,7.18244772121856,8.87814749921498,11.6691224192781,11.1094976192831,10.2952364732008,8.88986911206461,10.0957178047058,9.30665707816264,10.8659801058433,9.12525479604863,10.3744487762342,13.1098110457835,10.8842759088278,12.4060612944125,10.4784612082276,11.240779616651,11.3816440073586,17.7196937345422,9.12633304833263,10.6289468239479,12.7782580434723,9.0605752179982,13.0811774969096,11.669563171501,12.6921911837515,11.7073902638574,11.3119975918272,12.9013908153569,11.2228454331548,13.0498519936592,12.9040871911988,9.82154503607254,10.3807683594597,9.06661071611365,5.49583271463481,6.08222181958062,5.37177635120746,8.41668661102911,7.27951683094401,9.50658126043728 | ||
|short_description=p1@Brms1l | |short_description=p1@Brms1l | ||
}} | }} |
Revision as of 15:04, 13 November 2012
Short description: | p1@Brms1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Brms1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000012220, ENSMUST00000059250, NM_001037756, uc007noz.1, uc007npa.1_5end |
EntrezGene: | Brms1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.18e-08 | 54 |
central nervous system | 4.45e-08 | 73 |
neural tube | 7.10e-08 | 52 |
neural rod | 7.10e-08 | 52 |
future spinal cord | 7.10e-08 | 52 |
neural keel | 7.10e-08 | 52 |
nervous system | 7.92e-08 | 75 |
neurectoderm | 9.51e-08 | 64 |
neural plate | 9.51e-08 | 64 |
presumptive neural plate | 9.51e-08 | 64 |
structure with developmental contribution from neural crest | 1.41e-07 | 92 |
ecto-epithelium | 3.32e-07 | 73 |
gray matter | 6.97e-07 | 34 |
brain | 7.04e-07 | 47 |
future brain | 7.04e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.