FFCP PHASE1:Mm9::chr5:110877458..110877473,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
|id=chr5:110877458..110877473,- | |id=chr5:110877458..110877473,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.40e-09,9;CL:0002251,7.40e-09,9;CL:0000066,2.58e-07,25;CL:0000988,2.72e-07,32;CL:0002032,2.72e-07,32;CL:0000037,2.72e-07,32;CL:0000837,2.72e-07,32;CL:0000239,5.69e-07,6;CL:0000677,5.69e-07,6;CL:0000584,5.69e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.40e-09,9;UBERON:0004808,7.40e-09,9;UBERON:0001277,7.40e-09,9;UBERON:0000485,3.04e-08,11 | |||
|phase1_expression=1.28119077683835,4.53668029931169,6.3699893514535,6.35174843744343,9.01612313903425,2.18243053485457,2.10251376535973,9.8133725815598,11.1223090499817,12.1713553687437,0.171217968225505,0.319088635981346,8.21763503669787,6.46910977900581,0.999329285446988,1.01237633694913,1.39912375625629,0.630924330716475,0.822686601634433,0.84877930359606,1.87095238332354,0.297872853602656,0.522399578277871,0.799962113967033,0,2.29692785646008,3.01533397311352,1.939241094173,0.570070258369122,0.756090389279792,0.443461021310609,1.27006134691926,3.07532393792285,0,2.02196133825892,1.82858109894342,1.22501613757421,11.7188856606334,8.5946887897618,8.89990364755457,17.0587131528994,15.0270006690858,8.73918635456076,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,1.43752564364972,3.02008690903925,23.9369506863744,9.74672017513146,0.771778308107841,0.286533439938757,1.03134418455488,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0,1.14260393761521,0.220868540951614,0.367472397644862,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.548925861614458,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0.68014404096107,8.40607017234866,1.72084775396277,3.39985666853875,0.539703191637817,0.649776417447669,0.896053774194671,1.26399978118577,0,0,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,1.7127581957859,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.823120949949934,0.502666365318702,0.741584903203122,1.87979163995885,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0.255457055208591,9.70502508497954,5.99902730993408,5.08280908292259,1.19832511523858,0,0.628271760564322,0.695297280769106,0.767146371990992,0,0.324482526135515,0.305518091550949,0.870848794270651,1.76905930903572,1.05220927943237,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,1.15302348256365,1.03071897015702,1.03481348295606,0,0,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,3.08817488537658,5.39910648851626,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,1.07309360559848,1.16765342367169,0.658239399653922,1.64167464079095,1.37816976227955,1.16959989940266,0.878200461164203,1.47627060636409,0.420579897128254,0.617427674275707,1.32167513193519,1.58670339998127,0,0,0.257734922644187,0,0.22237804384487,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.795825888164603,0.974820435595601,1.79763881730844,1.51296634912286,1.59313018603494,0,0.799739588268102,0,0.203651327845314,0.775809948670503,0.420814919341911,0.569128834118316,0.295220295959204,0.784993639206874,1.23397163921801,0.889357881261447,0.667380422864376,0.393117990226406,0.449724224769707,0,0.482354319504834,0.25462585178142,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,2.41221760681684,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0.335012514883631,0.476087281772027,1.56106918286239,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,1.65562047782839,0.481651769963376,0.586058432961016,0.655739781506702,1.51482556322624,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0.851640511249612,0.35613120733451,0.651547837414304,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0,0.886701168211368,1.24858172321449,0.493647061806363,0.608929898229199,0.704015124191131,0.847328283455281,0,0.32977250588296,0.645857706783622,0.663442174209714,0.358117032009409,0.328281799490123,0.582961673259701,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.228778173206523,30.0861821089124,29.2498535356445,26.1197950490361,0,0.474503990371703,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,1.03691978633434,0.621339313086926,3.38215763210514,2.39226473670366,1.32366792365678,0.583353565032143,1.6790777052105,0.844780627453891,1.17357238645754,5.33837977860195,16.672635763688,7.48910774560619,4.32045009386798,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.590758108698309,0.403865799792591,0.838274873204998,0.604957110821043,0.292373642219257,0.384847366561318,0.584384510907845,0.906921534460845,0.887943813496259,0.986852422704233,0.839423081820392,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.415149390336707,0.399024873401031,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,1.51618327058278,0.50695859978048,0,0.37456602987953,0.192075457214608,0.631790158511746,0,0.811190281613988,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0.715308569841963,0.436039249896986,0.658765662907314,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,1.07435527024149,1.72159498861959,0.661774257358546,1.15933917810211 | |phase1_expression=1.28119077683835,4.53668029931169,6.3699893514535,6.35174843744343,9.01612313903425,2.18243053485457,2.10251376535973,9.8133725815598,11.1223090499817,12.1713553687437,0.171217968225505,0.319088635981346,8.21763503669787,6.46910977900581,0.999329285446988,1.01237633694913,1.39912375625629,0.630924330716475,0.822686601634433,0.84877930359606,1.87095238332354,0.297872853602656,0.522399578277871,0.799962113967033,0,2.29692785646008,3.01533397311352,1.939241094173,0.570070258369122,0.756090389279792,0.443461021310609,1.27006134691926,3.07532393792285,0,2.02196133825892,1.82858109894342,1.22501613757421,11.7188856606334,8.5946887897618,8.89990364755457,17.0587131528994,15.0270006690858,8.73918635456076,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,1.43752564364972,3.02008690903925,23.9369506863744,9.74672017513146,0.771778308107841,0.286533439938757,1.03134418455488,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0,1.14260393761521,0.220868540951614,0.367472397644862,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.548925861614458,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0.68014404096107,8.40607017234866,1.72084775396277,3.39985666853875,0.539703191637817,0.649776417447669,0.896053774194671,1.26399978118577,0,0,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,1.7127581957859,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.823120949949934,0.502666365318702,0.741584903203122,1.87979163995885,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0.255457055208591,9.70502508497954,5.99902730993408,5.08280908292259,1.19832511523858,0,0.628271760564322,0.695297280769106,0.767146371990992,0,0.324482526135515,0.305518091550949,0.870848794270651,1.76905930903572,1.05220927943237,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,1.15302348256365,1.03071897015702,1.03481348295606,0,0,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,3.08817488537658,5.39910648851626,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,1.07309360559848,1.16765342367169,0.658239399653922,1.64167464079095,1.37816976227955,1.16959989940266,0.878200461164203,1.47627060636409,0.420579897128254,0.617427674275707,1.32167513193519,1.58670339998127,0,0,0.257734922644187,0,0.22237804384487,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.795825888164603,0.974820435595601,1.79763881730844,1.51296634912286,1.59313018603494,0,0.799739588268102,0,0.203651327845314,0.775809948670503,0.420814919341911,0.569128834118316,0.295220295959204,0.784993639206874,1.23397163921801,0.889357881261447,0.667380422864376,0.393117990226406,0.449724224769707,0,0.482354319504834,0.25462585178142,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,2.41221760681684,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0.335012514883631,0.476087281772027,1.56106918286239,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,1.65562047782839,0.481651769963376,0.586058432961016,0.655739781506702,1.51482556322624,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0.851640511249612,0.35613120733451,0.651547837414304,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0,0.886701168211368,1.24858172321449,0.493647061806363,0.608929898229199,0.704015124191131,0.847328283455281,0,0.32977250588296,0.645857706783622,0.663442174209714,0.358117032009409,0.328281799490123,0.582961673259701,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.228778173206523,30.0861821089124,29.2498535356445,26.1197950490361,0,0.474503990371703,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,1.03691978633434,0.621339313086926,3.38215763210514,2.39226473670366,1.32366792365678,0.583353565032143,1.6790777052105,0.844780627453891,1.17357238645754,5.33837977860195,16.672635763688,7.48910774560619,4.32045009386798,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.590758108698309,0.403865799792591,0.838274873204998,0.604957110821043,0.292373642219257,0.384847366561318,0.584384510907845,0.906921534460845,0.887943813496259,0.986852422704233,0.839423081820392,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.415149390336707,0.399024873401031,0,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,1.51618327058278,0.50695859978048,0,0.37456602987953,0.192075457214608,0.631790158511746,0,0.811190281613988,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0.715308569841963,0.436039249896986,0.658765662907314,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,1.07435527024149,1.72159498861959,0.661774257358546,1.15933917810211 | ||
|short_description=p4@Fbrsl1 | |short_description=p4@Fbrsl1 | ||
}} | }} | ||
Revision as of 18:08, 13 November 2012
| Short description: | p4@Fbrsl1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Fbrsl1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:169 |
| Association with transcript: | 48bp_to_ENSMUST00000069483, ENSMUST00000086651, ENSMUST00000086653, NM_001142642, uc012ebb.1_5end |
| EntrezGene: | Fbrsl1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 7.40e-09 | 9 |
| epithelial cell of alimentary canal | 7.40e-09 | 9 |
| epithelial cell | 2.58e-07 | 25 |
| hematopoietic cell | 2.72e-07 | 32 |
| hematopoietic oligopotent progenitor cell | 2.72e-07 | 32 |
| hematopoietic stem cell | 2.72e-07 | 32 |
| hematopoietic multipotent progenitor cell | 2.72e-07 | 32 |
| brush border epithelial cell | 5.69e-07 | 6 |
| gut absorptive cell | 5.69e-07 | 6 |
| enterocyte | 5.69e-07 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 7.40e-09 | 9 |
| gastrointestinal system epithelium | 7.40e-09 | 9 |
| intestinal epithelium | 7.40e-09 | 9 |
| simple columnar epithelium | 3.04e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
