Personal tools

FFCP PHASE1:Mm9::chr19:28085676..28085711,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr19:28085676..28085711,-
|id=chr19:28085676..28085711,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.61e-08!94
|ontology_enrichment_uberon=UBERON:0000153!1.61e-08!94
|ontology_enrichment_uberon_v019_2=
|phase1_expression=5.92550734287738,0.697950815278722,3.18499467572675,2.41971369045464,2.50447864973174,3.02182689441402,3.27057696833736,5.55230290798778,1.267098499365,0.468129052643987,0.68487187290202,1.11681022593471,4.62241970814255,5.59490575481583,3.33109761815663,4.04950534779652,2.09868563438444,7.5710919685977,9.59801035240171,5.51706547337439,5.3577272795174,3.67376519443276,3.91799683708403,1.11994695955385,0.91763712426868,0.57423196411502,1.7230479846363,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,5.71527606113668,3.69038872550742,0,2.59966457776147,1.99481574430191,2.45003227514843,5.02237956884289,3.906676722619,7.85285615960697,12.9410927366823,6.83045484958446,4.85510353031154,2.39203954153597,3.24406179902447,3.67093504323363,1.56478268869608,0.436050312760893,0.219686182734472,1.74986909166855,0.699932108126813,1.43752564364972,4.86569557567435,6.5282592781021,2.68875039313971,1.02903774414379,1.71920063963254,1.03134418455488,4.04632921719196,2.64495489636016,3.1691570175309,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,6.947204024668,4.18518408828241,5.8890989178387,2.28520787523043,1.98781686856452,7.34944795289724,7.3801012684042,5.51531271966013,2.20231761998777,5.61824287574826,5.68344173048101,4.2203612073662,5.39777097254217,5.2091337055676,4.18774498502071,2.25105044012672,4.73674568108111,4.71405736757868,6.83384067835694,2.98239113320481,2.80186915332781,2.64500460373749,8.11620568364698,0.860423876981386,0,0.539703191637817,3.89865850468601,1.79210754838934,2.66844398250329,1.1930122580464,2.07828803682295,0,8.16891834704747,3.84979432242953,2.54805239706646,0,0.865964164044856,0.760079596425296,2.02209778005913,4.22480354960522,30.2957323867191,3.41416919849097,3.29622120855658,4.87144765299426,2.07553947530453,3.46662073271032,4.9387256996996,3.14166478324189,1.97755974187499,6.2177723475562,5.30766331169925,4.04417124868523,4.41683036920787,6.78825354389311,0,11.4184510834503,14.8707161837553,2.81002760729451,3.71426885968353,0.599902730993408,2.1601938602421,6.89036941262184,5.49000723382352,5.27748278874031,6.08385120672968,6.64860189058859,4.36354893575076,5.19172041816825,4.68461073711455,5.22509276562391,2.0217820674694,7.36546495602659,10.0192741081282,3.44853156650209,9.54329287968351,12.3577950625286,11.838350852331,12.9394857487698,13.3993466120412,12.1590584247337,6.68260778091811,7.75334928688059,11.4368230706567,5.69908904311695,9.17555922444473,5.92028683087683,6.58502836505419,7.96137067273973,0.702213187313235,1.02939162845886,0.568326998791185,5.79952163099405,4.45599513964083,4.8616756594474,6.15536312521547,4.13204886669548,4.9365476123961,3.25547522650571,4.82892122519315,3.38619492864792,1.81015834904829,3.11918181750281,4.45878452502207,2.63159977365598,3.07370161407471,3.22095405024892,4.6263788684108,6.5858951922742,2.97376904685418,2.90895623329899,7.89166526980366,6.73486348395272,8.50525244725816,4.84040459096022,7.33847544688072,3.99473814836374,6.16887780007865,3.62337700392824,3.77002813200404,4.37704238490532,2.53453313254856,6.29173586057955,3.02593269824572,2.98711909881551,6.82804443431094,7.88314737007129,10.1436962105772,8.96065842519383,8.33995694820791,4.9095073923223,7.14572869504107,7.38050739898011,5.33795674660674,3.82531208157582,1.1858105083486,6.00642380577939,5.70021085828289,4.72210436008193,4.66578279193557,4.3411888755435,3.31013607315846,6.32931502391783,4.05338066937588,3.56929837144506,14.3768206527355,5.20997326735905,3.12037673114561,2.52578877947112,4.30553792452589,2.8946611281802,5.35784251483154,5.68474235311454,6.84452901056509,8.14776411720903,8.91822943496308,9.71536293162531,5.71304738126433,5.07347484430277,6.30540576424764,5.75808193086815,5.58091690301205,6.39066927391378,6.04397436530635,6.07526046042349,0,3.80733978673097,1.96705709207614,3.03530420935206,4.33486592967038,5.74337264301796,0.819674726883377,3.02965112645248,2.83957397474631,5.85658116444958,7.10897212518236,4.06246956519338,8.46634961513098,10.7569081699756,4.85772842009873,7.59865230569411,9.48690667071656,11.5675673911851,7.09700426041343,3.73937767701236,4.72372182125371,7.09371528781903,5.30980553359851,5.82673526771955,6.04647113929502,5.28094223316515,3.2483208216885,4.91896236710284,2.84271122485043,5.45300594216258,7.12994756769443,3.47640433729398,3.16255825724996,3.09406629744561,10.2131881726136,7.38250485528372,3.49268446213437,6.43011105094777,11.5271151867478,9.0968096977056,10.3665882979336,3.34911444026059,2.58138878870081,1.48282449604674,2.42581237860458,12.366468970611,5.48979050766079,4.70440814439616,5.252383136138,4.59594519286172,2.62332752966866,2.22510362412612,6.1513517087227,4.54051109519089,10.3708935327039,5.65105371014073,8.88512480186664,4.80434163733698,4.07948231985253,2.09927178485487,2.9021994498929,0,6.48488786841327,5.69294507955176,7.34436317588249,6.89991376847747,5.67742665740062,3.10187996685088,3.38879168473877,2.09404753587224,2.98114438571124,8.07741107013003,1.12738587736838,8.82147621659475,3.47462829959905,4.4723773319131,5.55387240954244,8.78571852552046,3.99014611395563,5.59878854828985,3.77493639932559,2.41584120826006,2.01621004380506,9.79634473947353,2.63542779877213,4.00572732942826,3.50786222040047,5.01274747868948,7.54989148168807,7.21172697119813,9.00906115764921,8.6831146955407,8.00171469877498,11.4941851055998,11.3051141658113,10.4870907387959,11.5708133159753,1.58711268530648,1.77588762699252,1.43542170575161,0.671538465456314,3.67060228661162,2.25218970541418,2.93042598827624,2.57242054894879,2.00628841614145,6.21227026878773,6.44455331110048,9.16632821503035,9.45192502890282,7.53590771747707,5.2877572817279,3.37511250115903,7.65546045481175,7.70342095273148,4.65984280576638,7.16132698330819,9.97562183502578,5.12200817262403,5.59145449257076,1.88651846365184,4.77993121970037,6.22290837844523,6.79915688888351,4.81378814387723,6.57012750585873,7.60437899670719,6.03604292435444,9.17686773204848,7.68301828858431,8.38557846751954,9.52587382566147,5.09891034157364,6.36600427530227,5.35711671044299,5.4463600449727,4.80016953339582,5.50174999093946,8.10683045820891,8.1393993314104,4.98779716201252,6.43071019976741,5.48783918618318,5.26139422875686,5.70377278152619,8.97827634652382,6.05038592433288,6.30428687203606,6.54769669071503,8.6764631064141,4.62975866354739,4.74640098082097,4.91256377735358,3.22306581072447,1.14772999241306,2.42650561031467,2.08681052058379
|phase1_expression=5.92550734287738,0.697950815278722,3.18499467572675,2.41971369045464,2.50447864973174,3.02182689441402,3.27057696833736,5.55230290798778,1.267098499365,0.468129052643987,0.68487187290202,1.11681022593471,4.62241970814255,5.59490575481583,3.33109761815663,4.04950534779652,2.09868563438444,7.5710919685977,9.59801035240171,5.51706547337439,5.3577272795174,3.67376519443276,3.91799683708403,1.11994695955385,0.91763712426868,0.57423196411502,1.7230479846363,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,5.71527606113668,3.69038872550742,0,2.59966457776147,1.99481574430191,2.45003227514843,5.02237956884289,3.906676722619,7.85285615960697,12.9410927366823,6.83045484958446,4.85510353031154,2.39203954153597,3.24406179902447,3.67093504323363,1.56478268869608,0.436050312760893,0.219686182734472,1.74986909166855,0.699932108126813,1.43752564364972,4.86569557567435,6.5282592781021,2.68875039313971,1.02903774414379,1.71920063963254,1.03134418455488,4.04632921719196,2.64495489636016,3.1691570175309,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,6.947204024668,4.18518408828241,5.8890989178387,2.28520787523043,1.98781686856452,7.34944795289724,7.3801012684042,5.51531271966013,2.20231761998777,5.61824287574826,5.68344173048101,4.2203612073662,5.39777097254217,5.2091337055676,4.18774498502071,2.25105044012672,4.73674568108111,4.71405736757868,6.83384067835694,2.98239113320481,2.80186915332781,2.64500460373749,8.11620568364698,0.860423876981386,0,0.539703191637817,3.89865850468601,1.79210754838934,2.66844398250329,1.1930122580464,2.07828803682295,0,8.16891834704747,3.84979432242953,2.54805239706646,0,0.865964164044856,0.760079596425296,2.02209778005913,4.22480354960522,30.2957323867191,3.41416919849097,3.29622120855658,4.87144765299426,2.07553947530453,3.46662073271032,4.9387256996996,3.14166478324189,1.97755974187499,6.2177723475562,5.30766331169925,4.04417124868523,4.41683036920787,6.78825354389311,0,11.4184510834503,14.8707161837553,2.81002760729451,3.71426885968353,0.599902730993408,2.1601938602421,6.89036941262184,5.49000723382352,5.27748278874031,6.08385120672968,6.64860189058859,4.36354893575076,5.19172041816825,4.68461073711455,5.22509276562391,2.0217820674694,7.36546495602659,10.0192741081282,3.44853156650209,9.54329287968351,12.3577950625286,11.838350852331,12.9394857487698,13.3993466120412,12.1590584247337,6.68260778091811,7.75334928688059,11.4368230706567,5.69908904311695,9.17555922444473,5.92028683087683,6.58502836505419,7.96137067273973,0.702213187313235,1.02939162845886,0.568326998791185,5.79952163099405,4.45599513964083,4.8616756594474,6.15536312521547,4.13204886669548,4.9365476123961,3.25547522650571,4.82892122519315,3.38619492864792,1.81015834904829,3.11918181750281,4.45878452502207,2.63159977365598,3.07370161407471,3.22095405024892,4.6263788684108,6.5858951922742,2.97376904685418,2.90895623329899,7.89166526980366,6.73486348395272,8.50525244725816,4.84040459096022,7.33847544688072,3.99473814836374,6.16887780007865,3.62337700392824,3.77002813200404,4.37704238490532,2.53453313254856,6.29173586057955,3.02593269824572,2.98711909881551,6.82804443431094,7.88314737007129,10.1436962105772,8.96065842519383,8.33995694820791,4.9095073923223,7.14572869504107,7.38050739898011,5.33795674660674,3.82531208157582,1.1858105083486,6.00642380577939,5.70021085828289,4.72210436008193,4.66578279193557,4.3411888755435,3.31013607315846,6.32931502391783,4.05338066937588,3.56929837144506,14.3768206527355,5.20997326735905,3.12037673114561,2.52578877947112,4.30553792452589,2.8946611281802,5.35784251483154,5.68474235311454,6.84452901056509,8.14776411720903,8.91822943496308,9.71536293162531,5.71304738126433,5.07347484430277,6.30540576424764,5.75808193086815,5.58091690301205,6.39066927391378,6.04397436530635,6.07526046042349,0,3.80733978673097,1.96705709207614,3.03530420935206,4.33486592967038,5.74337264301796,0.819674726883377,3.02965112645248,2.83957397474631,5.85658116444958,7.10897212518236,4.06246956519338,8.46634961513098,10.7569081699756,4.85772842009873,7.59865230569411,9.48690667071656,11.5675673911851,7.09700426041343,3.73937767701236,4.72372182125371,7.09371528781903,5.30980553359851,5.82673526771955,6.04647113929502,5.28094223316515,3.2483208216885,4.91896236710284,2.84271122485043,5.45300594216258,7.12994756769443,3.47640433729398,3.16255825724996,3.09406629744561,10.2131881726136,7.38250485528372,3.49268446213437,6.43011105094777,11.5271151867478,9.0968096977056,10.3665882979336,3.34911444026059,2.58138878870081,1.48282449604674,2.42581237860458,12.366468970611,5.48979050766079,4.70440814439616,5.252383136138,4.59594519286172,2.62332752966866,2.22510362412612,6.1513517087227,4.54051109519089,10.3708935327039,5.65105371014073,8.88512480186664,4.80434163733698,4.07948231985253,2.09927178485487,2.9021994498929,0,6.48488786841327,5.69294507955176,7.34436317588249,6.89991376847747,5.67742665740062,3.10187996685088,3.38879168473877,2.09404753587224,2.98114438571124,8.07741107013003,1.12738587736838,8.82147621659475,3.47462829959905,4.4723773319131,5.55387240954244,8.78571852552046,3.99014611395563,5.59878854828985,3.77493639932559,2.41584120826006,2.01621004380506,9.79634473947353,2.63542779877213,4.00572732942826,3.50786222040047,5.01274747868948,7.54989148168807,7.21172697119813,9.00906115764921,8.6831146955407,8.00171469877498,11.4941851055998,11.3051141658113,10.4870907387959,11.5708133159753,1.58711268530648,1.77588762699252,1.43542170575161,0.671538465456314,3.67060228661162,2.25218970541418,2.93042598827624,2.57242054894879,2.00628841614145,6.21227026878773,6.44455331110048,9.16632821503035,9.45192502890282,7.53590771747707,5.2877572817279,3.37511250115903,7.65546045481175,7.70342095273148,4.65984280576638,7.16132698330819,9.97562183502578,5.12200817262403,5.59145449257076,1.88651846365184,4.77993121970037,6.22290837844523,6.79915688888351,4.81378814387723,6.57012750585873,7.60437899670719,6.03604292435444,9.17686773204848,7.68301828858431,8.38557846751954,9.52587382566147,5.09891034157364,6.36600427530227,5.35711671044299,5.4463600449727,4.80016953339582,5.50174999093946,8.10683045820891,8.1393993314104,4.98779716201252,6.43071019976741,5.48783918618318,5.26139422875686,5.70377278152619,8.97827634652382,6.05038592433288,6.30428687203606,6.54769669071503,8.6764631064141,4.62975866354739,4.74640098082097,4.91256377735358,3.22306581072447,1.14772999241306,2.42650561031467,2.08681052058379
|short_description=p2@Rfx3
|short_description=p2@Rfx3
}}
}}

Revision as of 19:23, 13 November 2012

Short description:p2@Rfx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rfx3_5end
Coexpression cluster:NA
Association with transcript: -20bp_to_ENSMUST00000112613, ENSMUST00000173161, NM_011265, uc008hcb.2, uc008hcc.2, uc008hcd.2, uc008hce.2_5end
EntrezGene:Rfx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rfx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H930.30
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H16.22
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I214.87
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C611.84
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G813.40
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E211.44
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D88.51
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D57.15
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H34.70
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H18.89
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F58.82
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G58.79
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F87.21
thymus, neonate N03.CNhs11137.2104-43C79.01
thymus, neonate N06.CNhs11197.681-26C48.68
thymus, neonate N07.CNhs11211.713-19D38.00
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A211.31
thymus, neonate N25.CNhs11125.1362-25G710.49
thymus, neonate N30.CNhs11132.1393-42G211.57
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:28085676..28085711,-&oldid=2273218"