FFCP PHASE1:Mm9::chr19:5878622..5878644,+: Difference between revisions
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|id=chr19:5878622..5878644,+ | |id=chr19:5878622..5878644,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.25e-09,25;CL:0002563,3.00e-09,9;CL:0002251,3.00e-09,9;CL:0000223,5.78e-08,20;CL:0000239,1.53e-07,6;CL:0000677,1.53e-07,6;CL:0000584,1.53e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.45e-17!43;UBERON:0005409!7.65e-16!59;UBERON:0001007!5.77e-11!128;UBERON:0001555!5.77e-11!128;UBERON:0007026!5.77e-11!128;UBERON:0005172!1.56e-10!49;UBERON:0005173!1.56e-10!49;UBERON:0002417!1.56e-10!49;UBERON:0000916!1.56e-10!49;UBERON:0004119!2.52e-10!130;UBERON:0000925!2.52e-10!130;UBERON:0006595!2.52e-10!130;UBERON:0000466!4.32e-10!79;UBERON:0004921!5.43e-10!126;UBERON:0004185!5.43e-10!126;UBERON:0000344!1.55e-09!15;UBERON:0005177!3.08e-09!85;UBERON:0002100!8.48e-09!98;UBERON:0001242!3.89e-08!13;UBERON:0000060!3.89e-08!13;UBERON:0001262!3.89e-08!13;UBERON:0004786!3.89e-08!13;UBERON:0009569!4.36e-08!66;UBERON:0009854!9.80e-08!23;UBERON:0009856!9.80e-08!23;UBERON:0002107!2.06e-07!22;UBERON:0007499!2.06e-07!22;UBERON:0006925!2.06e-07!22;UBERON:0009497!2.06e-07!22;UBERON:0000015!2.06e-07!22;UBERON:0002423!2.06e-07!22;UBERON:0006235!2.06e-07!22;UBERON:0008835!2.06e-07!22;UBERON:0003894!2.06e-07!22;UBERON:0004161!2.06e-07!22;UBERON:0008836!2.06e-07!22;UBERON:0002365!2.25e-07!25;UBERON:0002330!2.25e-07!25;UBERON:0002108!2.99e-07!16 | |ontology_enrichment_uberon=UBERON:0000160!2.45e-17!43;UBERON:0005409!7.65e-16!59;UBERON:0001007!5.77e-11!128;UBERON:0001555!5.77e-11!128;UBERON:0007026!5.77e-11!128;UBERON:0005172!1.56e-10!49;UBERON:0005173!1.56e-10!49;UBERON:0002417!1.56e-10!49;UBERON:0000916!1.56e-10!49;UBERON:0004119!2.52e-10!130;UBERON:0000925!2.52e-10!130;UBERON:0006595!2.52e-10!130;UBERON:0000466!4.32e-10!79;UBERON:0004921!5.43e-10!126;UBERON:0004185!5.43e-10!126;UBERON:0000344!1.55e-09!15;UBERON:0005177!3.08e-09!85;UBERON:0002100!8.48e-09!98;UBERON:0001242!3.89e-08!13;UBERON:0000060!3.89e-08!13;UBERON:0001262!3.89e-08!13;UBERON:0004786!3.89e-08!13;UBERON:0009569!4.36e-08!66;UBERON:0009854!9.80e-08!23;UBERON:0009856!9.80e-08!23;UBERON:0002107!2.06e-07!22;UBERON:0007499!2.06e-07!22;UBERON:0006925!2.06e-07!22;UBERON:0009497!2.06e-07!22;UBERON:0000015!2.06e-07!22;UBERON:0002423!2.06e-07!22;UBERON:0006235!2.06e-07!22;UBERON:0008835!2.06e-07!22;UBERON:0003894!2.06e-07!22;UBERON:0004161!2.06e-07!22;UBERON:0008836!2.06e-07!22;UBERON:0002365!2.25e-07!25;UBERON:0002330!2.25e-07!25;UBERON:0002108!2.99e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.97e-13,15;UBERON:0000160,3.55e-13,31;UBERON:0001242,4.36e-11,13;UBERON:0001262,4.36e-11,13;UBERON:0004786,4.36e-11,13;UBERON:0003350,3.00e-09,9;UBERON:0004808,3.00e-09,9;UBERON:0001277,3.00e-09,9;UBERON:0005409,7.10e-08,47;UBERON:0000485,3.96e-07,11;UBERON:0002323,5.40e-07,37;UBERON:0004458,5.40e-07,37;UBERON:0005172,6.22e-07,49;UBERON:0005173,6.22e-07,49;UBERON:0002417,6.22e-07,49;UBERON:0000916,6.22e-07,49 | |||
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| ||
|short_description=p2@Slc25a45 | |short_description=p2@Slc25a45 | ||
}} | }} |
Revision as of 19:55, 13 November 2012
Short description: | p2@Slc25a45 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc25a45_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000136833_5end |
EntrezGene: | Slc25a45 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.25e-09 | 25 |
intestinal epithelial cell | 3.00e-09 | 9 |
epithelial cell of alimentary canal | 3.00e-09 | 9 |
endodermal cell | 5.78e-08 | 20 |
brush border epithelial cell | 1.53e-07 | 6 |
gut absorptive cell | 1.53e-07 | 6 |
enterocyte | 1.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.97e-13 | 15 |
intestine | 3.55e-13 | 31 |
intestinal mucosa | 4.36e-11 | 13 |
wall of intestine | 4.36e-11 | 13 |
gastrointestinal system mucosa | 4.36e-11 | 13 |
epithelium of mucosa | 3.00e-09 | 9 |
gastrointestinal system epithelium | 3.00e-09 | 9 |
intestinal epithelium | 3.00e-09 | 9 |
gastrointestinal system | 7.10e-08 | 47 |
simple columnar epithelium | 3.96e-07 | 11 |
body cavity | 5.40e-07 | 37 |
body cavity or lining | 5.40e-07 | 37 |
abdomen element | 6.22e-07 | 49 |
abdominal segment element | 6.22e-07 | 49 |
abdominal segment of trunk | 6.22e-07 | 49 |
abdomen | 6.22e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.