FFCP PHASE1:Mm9::chr18:38369387..38369401,-: Difference between revisions
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|id=chr18:38369387..38369401,- | |id=chr18:38369387..38369401,- | ||
|ontology_enrichment_celltype=CL:0000066!4.79e-08!25;CL:0002563!6.56e-08!9;CL:0002251!6.56e-08!9;CL:0000223!8.63e-07!20 | |ontology_enrichment_celltype=CL:0000066!4.79e-08!25;CL:0002563!6.56e-08!9;CL:0002251!6.56e-08!9;CL:0000223!8.63e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.67e-15,25;CL:0002563,2.14e-14,9;CL:0002251,2.14e-14,9;CL:0002076,1.50e-13,15;CL:0000223,3.53e-13,20;CL:0000239,8.97e-11,6;CL:0000677,8.97e-11,6;CL:0000584,8.97e-11,6;CL:0000075,4.44e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-20!130;UBERON:0000925!1.45e-20!130;UBERON:0006595!1.45e-20!130;UBERON:0001007!8.92e-20!128;UBERON:0001555!8.92e-20!128;UBERON:0007026!8.92e-20!128;UBERON:0005409!2.09e-19!59;UBERON:0000160!6.95e-19!43;UBERON:0004921!1.38e-18!126;UBERON:0004185!1.38e-18!126;UBERON:0000344!6.18e-12!15;UBERON:0001242!9.48e-11!13;UBERON:0000060!9.48e-11!13;UBERON:0001262!9.48e-11!13;UBERON:0004786!9.48e-11!13;UBERON:0003350!6.56e-08!9;UBERON:0004808!6.56e-08!9;UBERON:0001277!6.56e-08!9;UBERON:0004923!1.35e-07!24 | |ontology_enrichment_uberon=UBERON:0004119!1.45e-20!130;UBERON:0000925!1.45e-20!130;UBERON:0006595!1.45e-20!130;UBERON:0001007!8.92e-20!128;UBERON:0001555!8.92e-20!128;UBERON:0007026!8.92e-20!128;UBERON:0005409!2.09e-19!59;UBERON:0000160!6.95e-19!43;UBERON:0004921!1.38e-18!126;UBERON:0004185!1.38e-18!126;UBERON:0000344!6.18e-12!15;UBERON:0001242!9.48e-11!13;UBERON:0000060!9.48e-11!13;UBERON:0001262!9.48e-11!13;UBERON:0004786!9.48e-11!13;UBERON:0003350!6.56e-08!9;UBERON:0004808!6.56e-08!9;UBERON:0001277!6.56e-08!9;UBERON:0004923!1.35e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.64e-40,31;UBERON:0005409,1.94e-35,47;UBERON:0001007,4.15e-26,116;UBERON:0001555,4.15e-26,116;UBERON:0007026,4.15e-26,116;UBERON:0004119,1.90e-25,118;UBERON:0000925,1.90e-25,118;UBERON:0006595,1.90e-25,118;UBERON:0004921,4.40e-24,114;UBERON:0000344,1.55e-22,15;UBERON:0001242,3.91e-20,13;UBERON:0001262,3.91e-20,13;UBERON:0004786,3.91e-20,13;UBERON:0003350,2.14e-14,9;UBERON:0004808,2.14e-14,9;UBERON:0001277,2.14e-14,9;UBERON:0004923,3.97e-14,24;UBERON:0000485,2.20e-11,11;UBERON:0011216,5.69e-09,194;UBERON:0002108,3.92e-07,4 | |||
|phase1_expression=0,10.1202868215415,5.45999087267443,16.3330674105688,11.520601788766,5.03637815735669,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,2.75291137280604,9.76194338995534,5.1691439539089,6.03319451520489,5.51067916423484,5.54466285471848,2.43903561720835,0,0,0,4.04392267651784,2.65975432573588,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,4.31762553310254,5.19821133958135,0.896053774194671,0.561777680527007,0,0,0,0.14084341977668,0,0,0,2.81438353314578,3.04031838570118,2.02209778005913,2.2836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,1.73036477414062,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.630869845692382,0,15.1992640172547,7.93351699990633,0.213288250535234,0.232236671860439,1.15980715189884,2.62188582010345,2.00140239460383,4.37518940058886,7.11793592316767,6.0938613247884,6.28338022000674,7.95825888164603,7.60359939764569,5.39291645192533,3.8904848977445,6.57166201739412,0,0,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.370191491765402,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,1.64736847912849,1.43768206527355,2.97712758134803,2.49630138491648,3.28352541331245,3.04975602987251,3.37710464954357,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0.98931751764888,0.968786560175433,0.422190474497091,0.596861720015682,1.47726809770555,7.86998258900597,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,0.609958401380546,0.972048067396211,1.88179466413022,0.87345025498471,1.34864346384821,1.90102948168273,1.83229159388821,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.72076460338254,0.221985953374065,0.269141569828427,0.335769232728157,0.19318959403219,0,0,1.92931541171159,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.280924522409647,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,1.07435527024149,0,0,0 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|phase1_expression=0,10.1202868215415,5.45999087267443,16.3330674105688,11.520601788766,5.03637815735669,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,2.75291137280604,9.76194338995534,5.1691439539089,6.03319451520489,5.51067916423484,5.54466285471848,2.43903561720835,0,0,0,4.04392267651784,2.65975432573588,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,4.31762553310254,5.19821133958135,0.896053774194671,0.561777680527007,0,0,0,0.14084341977668,0,0,0,2.81438353314578,3.04031838570118,2.02209778005913,2.2836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0,1.73036477414062,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.630869845692382,0,15.1992640172547,7.93351699990633,0.213288250535234,0.232236671860439,1.15980715189884,2.62188582010345,2.00140239460383,4.37518940058886,7.11793592316767,6.0938613247884,6.28338022000674,7.95825888164603,7.60359939764569,5.39291645192533,3.8904848977445,6.57166201739412,0,0,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.370191491765402,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,1.64736847912849,1.43768206527355,2.97712758134803,2.49630138491648,3.28352541331245,3.04975602987251,3.37710464954357,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0.98931751764888,0.968786560175433,0.422190474497091,0.596861720015682,1.47726809770555,7.86998258900597,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,0.609958401380546,0.972048067396211,1.88179466413022,0.87345025498471,1.34864346384821,1.90102948168273,1.83229159388821,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.72076460338254,0.221985953374065,0.269141569828427,0.335769232728157,0.19318959403219,0,0,1.92931541171159,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.280924522409647,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,1.07435527024149,0,0,0 | ||
|short_description=p4@Pcdh1 | |short_description=p4@Pcdh1 | ||
}} | }} |
Revision as of 20:40, 13 November 2012
Short description: | p4@Pcdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pcdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 14bp_to_ENSMUST00000057185, NM_029357, uc008eru.1_5end |
EntrezGene: | Pcdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.67e-15 | 25 |
intestinal epithelial cell | 2.14e-14 | 9 |
epithelial cell of alimentary canal | 2.14e-14 | 9 |
endo-epithelial cell | 1.50e-13 | 15 |
endodermal cell | 3.53e-13 | 20 |
brush border epithelial cell | 8.97e-11 | 6 |
gut absorptive cell | 8.97e-11 | 6 |
enterocyte | 8.97e-11 | 6 |
columnar/cuboidal epithelial cell | 4.44e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.64e-40 | 31 |
gastrointestinal system | 1.94e-35 | 47 |
digestive system | 4.15e-26 | 116 |
digestive tract | 4.15e-26 | 116 |
primitive gut | 4.15e-26 | 116 |
endoderm-derived structure | 1.90e-25 | 118 |
endoderm | 1.90e-25 | 118 |
presumptive endoderm | 1.90e-25 | 118 |
subdivision of digestive tract | 4.40e-24 | 114 |
mucosa | 1.55e-22 | 15 |
intestinal mucosa | 3.91e-20 | 13 |
wall of intestine | 3.91e-20 | 13 |
gastrointestinal system mucosa | 3.91e-20 | 13 |
epithelium of mucosa | 2.14e-14 | 9 |
gastrointestinal system epithelium | 2.14e-14 | 9 |
intestinal epithelium | 2.14e-14 | 9 |
organ component layer | 3.97e-14 | 24 |
simple columnar epithelium | 2.20e-11 | 11 |
organ system subdivision | 5.69e-09 | 194 |
small intestine | 3.92e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.