FFCP PHASE1:Mm9::chr4:149594810..149594830,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:149594810..149594830,- | |id=chr4:149594810..149594830,- | ||
|ontology_enrichment_celltype=CL:0002563!4.88e-07!9;CL:0002251!4.88e-07!9 | |ontology_enrichment_celltype=CL:0002563!4.88e-07!9;CL:0002251!4.88e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-12,6;CL:0000677,2.60e-12,6;CL:0000584,2.60e-12,6;CL:0000075,1.43e-10,7;CL:0002563,3.06e-08,9;CL:0002251,3.06e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.63e-07!43;UBERON:0001242!2.47e-07!13;UBERON:0000060!2.47e-07!13;UBERON:0001262!2.47e-07!13;UBERON:0004786!2.47e-07!13;UBERON:0003350!4.88e-07!9;UBERON:0004808!4.88e-07!9;UBERON:0001277!4.88e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!1.63e-07!43;UBERON:0001242!2.47e-07!13;UBERON:0000060!2.47e-07!13;UBERON:0001262!2.47e-07!13;UBERON:0004786!2.47e-07!13;UBERON:0003350!4.88e-07!9;UBERON:0004808!4.88e-07!9;UBERON:0001277!4.88e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.16e-12,31;UBERON:0002107,1.05e-08,22;UBERON:0007499,1.05e-08,22;UBERON:0006925,1.05e-08,22;UBERON:0009497,1.05e-08,22;UBERON:0000015,1.05e-08,22;UBERON:0002423,1.05e-08,22;UBERON:0006235,1.05e-08,22;UBERON:0008835,1.05e-08,22;UBERON:0003894,1.05e-08,22;UBERON:0004161,1.05e-08,22;UBERON:0008836,1.05e-08,22;UBERON:0001242,1.77e-08,13;UBERON:0001262,1.77e-08,13;UBERON:0004786,1.77e-08,13;UBERON:0009854,2.73e-08,23;UBERON:0009856,2.73e-08,23;UBERON:0003350,3.06e-08,9;UBERON:0004808,3.06e-08,9;UBERON:0001277,3.06e-08,9;UBERON:0004921,4.51e-08,114;UBERON:0001007,6.99e-08,116;UBERON:0001555,6.99e-08,116;UBERON:0007026,6.99e-08,116;UBERON:0003929,8.96e-08,55;UBERON:0004119,1.07e-07,118;UBERON:0000925,1.07e-07,118;UBERON:0006595,1.07e-07,118;UBERON:0005409,1.22e-07,47;UBERON:0002365,1.45e-07,25;UBERON:0002330,1.45e-07,25;UBERON:0000344,2.58e-07,15;UBERON:0000485,9.44e-07,11 | |||
|phase1_expression=0,3.48975407639361,3.63999391511629,10.5862473957391,13.5241847085514,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29692785646008,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.23517741427141,1.38233250462643,0,2.60278842455841,0,0,0.220841518460394,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0,0,0,3.30418782983798,0,0,0,0,0,0,0.190225626112559,3.79623249235609,0.329397909448022,0.251335208800269,0.198956472041151,1.36474860983384,0,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,5.42947521255922,9.78293669387591,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,4.31304619582064,5.20997326735905,1.24815069245824,0.757736633841335,1.61457672169721,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.564656282491984,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,3.48975407639361,3.63999391511629,10.5862473957391,13.5241847085514,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29692785646008,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.23517741427141,1.38233250462643,0,2.60278842455841,0,0,0.220841518460394,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0,0,0,3.30418782983798,0,0,0,0,0,0,0.190225626112559,3.79623249235609,0.329397909448022,0.251335208800269,0.198956472041151,1.36474860983384,0,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,5.42947521255922,9.78293669387591,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,4.31304619582064,5.20997326735905,1.24815069245824,0.757736633841335,1.61457672169721,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.564656282491984,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr4:149594810..149594830,- | |short_description=p@chr4:149594810..149594830,- | ||
}} | }} |
Revision as of 23:02, 13 November 2012
Short description: | p@chr4:149594810..149594830, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:149594810..149594830, - |
Coexpression cluster: | MCL_coexpression_mm9:351 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.60e-12 | 6 |
gut absorptive cell | 2.60e-12 | 6 |
enterocyte | 2.60e-12 | 6 |
columnar/cuboidal epithelial cell | 1.43e-10 | 7 |
intestinal epithelial cell | 3.06e-08 | 9 |
epithelial cell of alimentary canal | 3.06e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.16e-12 | 31 |
liver | 1.05e-08 | 22 |
epithelial sac | 1.05e-08 | 22 |
digestive gland | 1.05e-08 | 22 |
epithelium of foregut-midgut junction | 1.05e-08 | 22 |
anatomical boundary | 1.05e-08 | 22 |
hepatobiliary system | 1.05e-08 | 22 |
foregut-midgut junction | 1.05e-08 | 22 |
hepatic diverticulum | 1.05e-08 | 22 |
liver primordium | 1.05e-08 | 22 |
septum transversum | 1.05e-08 | 22 |
liver bud | 1.05e-08 | 22 |
intestinal mucosa | 1.77e-08 | 13 |
wall of intestine | 1.77e-08 | 13 |
gastrointestinal system mucosa | 1.77e-08 | 13 |
digestive tract diverticulum | 2.73e-08 | 23 |
sac | 2.73e-08 | 23 |
epithelium of mucosa | 3.06e-08 | 9 |
gastrointestinal system epithelium | 3.06e-08 | 9 |
intestinal epithelium | 3.06e-08 | 9 |
subdivision of digestive tract | 4.51e-08 | 114 |
digestive system | 6.99e-08 | 116 |
digestive tract | 6.99e-08 | 116 |
primitive gut | 6.99e-08 | 116 |
gut epithelium | 8.96e-08 | 55 |
endoderm-derived structure | 1.07e-07 | 118 |
endoderm | 1.07e-07 | 118 |
presumptive endoderm | 1.07e-07 | 118 |
gastrointestinal system | 1.22e-07 | 47 |
exocrine gland | 1.45e-07 | 25 |
exocrine system | 1.45e-07 | 25 |
mucosa | 2.58e-07 | 15 |
simple columnar epithelium | 9.44e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.