FFCP PHASE1:Mm9::chrX:20158460..20158497,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chrX:20158460..20158497,- | |id=chrX:20158460..20158497,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.77e-09!114;UBERON:0004111!3.18e-08!122;UBERON:0003103!4.86e-08!43;UBERON:0001049!2.51e-07!52;UBERON:0005068!2.51e-07!52;UBERON:0006241!2.51e-07!52;UBERON:0007135!2.51e-07!52;UBERON:0007100!3.42e-07!18;UBERON:0000948!3.42e-07!18;UBERON:0005498!3.42e-07!18;UBERON:0004140!3.42e-07!18;UBERON:0009881!3.42e-07!18;UBERON:0004141!3.42e-07!18;UBERON:0003084!3.42e-07!18;UBERON:0007005!3.42e-07!18;UBERON:0004139!3.42e-07!18;UBERON:0004291!3.42e-07!18 | |ontology_enrichment_uberon=UBERON:0000025!4.77e-09!114;UBERON:0004111!3.18e-08!122;UBERON:0003103!4.86e-08!43;UBERON:0001049!2.51e-07!52;UBERON:0005068!2.51e-07!52;UBERON:0006241!2.51e-07!52;UBERON:0007135!2.51e-07!52;UBERON:0007100!3.42e-07!18;UBERON:0000948!3.42e-07!18;UBERON:0005498!3.42e-07!18;UBERON:0004140!3.42e-07!18;UBERON:0009881!3.42e-07!18;UBERON:0004141!3.42e-07!18;UBERON:0003084!3.42e-07!18;UBERON:0007005!3.42e-07!18;UBERON:0004139!3.42e-07!18;UBERON:0004291!3.42e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.21e-10,92;UBERON:0003103,1.79e-09,43;UBERON:0000025,2.90e-09,114;UBERON:0007100,3.06e-09,18;UBERON:0000948,3.06e-09,18;UBERON:0005498,3.06e-09,18;UBERON:0004140,3.06e-09,18;UBERON:0009881,3.06e-09,18;UBERON:0004141,3.06e-09,18;UBERON:0003084,3.06e-09,18;UBERON:0007005,3.06e-09,18;UBERON:0004139,3.06e-09,18;UBERON:0004291,3.06e-09,18;UBERON:0003914,2.13e-08,47;UBERON:0004111,5.10e-08,122;UBERON:0004535,2.31e-07,23;UBERON:0001009,2.31e-07,23 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.60492842261366,0,0.33575854382378,0.467225281191051,0.129123323441576,0.422366166455,0.234064526321993,0.68487187290202,0.319088635981346,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.10556277196391,0.893618560807968,1.82839852397255,1.59992422793407,1.14704640533585,0,0,0,1.71021077510736,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.405507724878058,0.734187008646726,1.56478268869608,2.39827672018491,3.07560655828261,1.55543919259427,0.979904951377538,0,0.671130424230945,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,2.6996991518442,0.988866362566974,0.7104801149461,2.99600110518405,2.68952813725088,0.414758449233911,0.135005938331691,0,2.28520787523043,1.76694832761291,0.367472397644862,0.575072826109418,0.919218786610021,0,2.55374676170375,1.22885226604995,0.527545150920775,1.00636407962651,1.56274011167028,5.30447698102624,3.93933827022176,1.83357897332172,1.76777151284201,1.56608848879013,0.745597783301202,0.757261933331841,0.302286240427142,0,1.72084775396277,2.719885334831,1.61910957491345,5.84798775702902,4.48026887097336,0.561777680527007,0.511290967734173,0.779358013808606,1.06001872353102,0.563373679106722,0,0,0,1.5154372870785,0.760079596425296,0.505524445014783,1.59857431606684,0.258937883647172,0,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,1.52865319276416,1.75933227861546,0.988779870937496,3.7595832799177,0,1.7794353494215,0.883366073841574,0.484875253135222,0,1.17112318804619,1.25668024088073,0.510914110417183,0.11981512450592,0,0,0.599162557619291,0.915001205637253,0.376963056338593,2.08589184230732,1.53429274398198,0.83115217823824,0.648965052271031,0.509196819251581,0.497627882440372,0,1.05220927943237,0.780722657776222,0.919608417733892,0.180062129805349,0.60281927134286,0.408218994907967,1.15302348256365,0.281105173679186,1.03481348295606,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,2.27838349789052,1.40715635988658,2.16074473753218,0.710234206755631,1.77087808572663,3.23960937063494,3.25547522650571,4.29237442239391,6.42209383019432,6.91151369636618,5.58169377868924,5.59374785866405,8.77199924551994,7.24515380460467,7.64976586934119,1.89260953707715,0.411618449517138,0.660837565967596,0.264450566663544,1.06644125267617,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,1.4822905925161,1.00534083520108,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,0.379335801906163,0.571242563048644,0,0.203651327845314,1.74557238450863,1.47285221769669,1.7706230394792,3.83786384746966,2.19798218977925,3.33172342588861,0.889357881261447,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0,1.72617682470486,1.62135226775035,1.37280706594041,1.43768206527355,0.372140947668503,2.18426371180192,3.03094653536534,2.15276896226295,0.964887042726734,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.827810238914197,1.60550589987792,2.10981035865966,0.327869890753351,3.53459298086122,0.315508219416257,1.17131623288992,0.430846795465598,0.238968797952552,0.891194696329576,0,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0.906970670894253,1.13163047853539,0.295301892880773,0.922305443831782,0,0.363533729477506,1.06949213515416,1.26414703174326,0,0,1.02131881726136,0.900305470156551,0.517434735131018,0.857348140126369,0.886701168211368,0.535106452806212,0.822745103010605,1.2178597964584,0.469343416127421,0.21183207086382,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.328281799490123,0.874442509889552,2.03967832211561,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0.139951452323658,0,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.836353184057875,1.09181281873089,1.61837215661785,0.909188012978695,1.57053565190418,1.29614973291793,0.621339313086926,1.69107881605257,0.149516546043979,0.66183396182839,0.583353565032143,0.129159823477731,0.675824501963113,0.821500670520278,0.911430693907651,0.838874755405687,0.724752362478018,2.88030006257865,0,0.405450430580328,0.513554785824136,0.389762468933385,0,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.350630706544707,1.13365191807606,0.887943813496259,1.25599399253266,0.503653849092235,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,1.71868654031819,6.01486138202907,0,1.5107877947794,2.70009000092722,0.900642406448441,2.26571204492102,1.55328093525546,0.830298780673413,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.551530525350042,0.888986911206461,1.03017528619447,1.28367683836726,0.252697211763798,0,0.377252682772152,1.87283014939765,1.28050304809739,0.976402972245426,0.952587382566147,0.579421629724277,0.38581844092741,1.64834360321323,0.441596760403192,1.71434626192708,1.77475806159337,1.90748951957857,1.30811774969096,1.12931256498397,0.846146078916765,0.182927972872773,1.31534855718921,1.62964936615034,0,1.30498519936592,0.492522411877817,0.818462086339379,2.16911577660352,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,1.53030665655075,1.98532277207564,1.39120701372253 | |phase1_expression=0.320297694209588,0.348975407639361,0,0.60492842261366,0,0.33575854382378,0.467225281191051,0.129123323441576,0.422366166455,0.234064526321993,0.68487187290202,0.319088635981346,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.10556277196391,0.893618560807968,1.82839852397255,1.59992422793407,1.14704640533585,0,0,0,1.71021077510736,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.405507724878058,0.734187008646726,1.56478268869608,2.39827672018491,3.07560655828261,1.55543919259427,0.979904951377538,0,0.671130424230945,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,2.6996991518442,0.988866362566974,0.7104801149461,2.99600110518405,2.68952813725088,0.414758449233911,0.135005938331691,0,2.28520787523043,1.76694832761291,0.367472397644862,0.575072826109418,0.919218786610021,0,2.55374676170375,1.22885226604995,0.527545150920775,1.00636407962651,1.56274011167028,5.30447698102624,3.93933827022176,1.83357897332172,1.76777151284201,1.56608848879013,0.745597783301202,0.757261933331841,0.302286240427142,0,1.72084775396277,2.719885334831,1.61910957491345,5.84798775702902,4.48026887097336,0.561777680527007,0.511290967734173,0.779358013808606,1.06001872353102,0.563373679106722,0,0,0,1.5154372870785,0.760079596425296,0.505524445014783,1.59857431606684,0.258937883647172,0,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,1.52865319276416,1.75933227861546,0.988779870937496,3.7595832799177,0,1.7794353494215,0.883366073841574,0.484875253135222,0,1.17112318804619,1.25668024088073,0.510914110417183,0.11981512450592,0,0,0.599162557619291,0.915001205637253,0.376963056338593,2.08589184230732,1.53429274398198,0.83115217823824,0.648965052271031,0.509196819251581,0.497627882440372,0,1.05220927943237,0.780722657776222,0.919608417733892,0.180062129805349,0.60281927134286,0.408218994907967,1.15302348256365,0.281105173679186,1.03481348295606,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,2.27838349789052,1.40715635988658,2.16074473753218,0.710234206755631,1.77087808572663,3.23960937063494,3.25547522650571,4.29237442239391,6.42209383019432,6.91151369636618,5.58169377868924,5.59374785866405,8.77199924551994,7.24515380460467,7.64976586934119,1.89260953707715,0.411618449517138,0.660837565967596,0.264450566663544,1.06644125267617,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,1.4822905925161,1.00534083520108,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,0.379335801906163,0.571242563048644,0,0.203651327845314,1.74557238450863,1.47285221769669,1.7706230394792,3.83786384746966,2.19798218977925,3.33172342588861,0.889357881261447,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0,1.72617682470486,1.62135226775035,1.37280706594041,1.43768206527355,0.372140947668503,2.18426371180192,3.03094653536534,2.15276896226295,0.964887042726734,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.827810238914197,1.60550589987792,2.10981035865966,0.327869890753351,3.53459298086122,0.315508219416257,1.17131623288992,0.430846795465598,0.238968797952552,0.891194696329576,0,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0.906970670894253,1.13163047853539,0.295301892880773,0.922305443831782,0,0.363533729477506,1.06949213515416,1.26414703174326,0,0,1.02131881726136,0.900305470156551,0.517434735131018,0.857348140126369,0.886701168211368,0.535106452806212,0.822745103010605,1.2178597964584,0.469343416127421,0.21183207086382,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.328281799490123,0.874442509889552,2.03967832211561,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0.139951452323658,0,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.836353184057875,1.09181281873089,1.61837215661785,0.909188012978695,1.57053565190418,1.29614973291793,0.621339313086926,1.69107881605257,0.149516546043979,0.66183396182839,0.583353565032143,0.129159823477731,0.675824501963113,0.821500670520278,0.911430693907651,0.838874755405687,0.724752362478018,2.88030006257865,0,0.405450430580328,0.513554785824136,0.389762468933385,0,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.350630706544707,1.13365191807606,0.887943813496259,1.25599399253266,0.503653849092235,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,1.71868654031819,6.01486138202907,0,1.5107877947794,2.70009000092722,0.900642406448441,2.26571204492102,1.55328093525546,0.830298780673413,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.551530525350042,0.888986911206461,1.03017528619447,1.28367683836726,0.252697211763798,0,0.377252682772152,1.87283014939765,1.28050304809739,0.976402972245426,0.952587382566147,0.579421629724277,0.38581844092741,1.64834360321323,0.441596760403192,1.71434626192708,1.77475806159337,1.90748951957857,1.30811774969096,1.12931256498397,0.846146078916765,0.182927972872773,1.31534855718921,1.62964936615034,0,1.30498519936592,0.492522411877817,0.818462086339379,2.16911577660352,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,1.53030665655075,1.98532277207564,1.39120701372253 | ||
|short_description=p1@ENSMUST00000096481,p1@ENSMUST00000117527 | |short_description=p1@ENSMUST00000096481,p1@ENSMUST00000117527 | ||
}} | }} |
Revision as of 23:14, 13 November 2012
Short description: | p1@ENSMUST00000096481, p1@ENSMUST00000117527 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000096481_5end, CAGE_peak_1_at_ENSMUST00000117527_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | -20bp_to_ENSMUST00000096481, ENSMUST00000117527_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.21e-10 | 92 |
compound organ | 1.79e-09 | 43 |
tube | 2.90e-09 | 114 |
primary circulatory organ | 3.06e-09 | 18 |
heart | 3.06e-09 | 18 |
primitive heart tube | 3.06e-09 | 18 |
primary heart field | 3.06e-09 | 18 |
anterior lateral plate mesoderm | 3.06e-09 | 18 |
heart tube | 3.06e-09 | 18 |
heart primordium | 3.06e-09 | 18 |
cardiac mesoderm | 3.06e-09 | 18 |
cardiogenic plate | 3.06e-09 | 18 |
heart rudiment | 3.06e-09 | 18 |
epithelial tube | 2.13e-08 | 47 |
anatomical conduit | 5.10e-08 | 122 |
cardiovascular system | 2.31e-07 | 23 |
circulatory system | 2.31e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.