FFCP PHASE1:Mm9::chr5:109122987..109123024,-: Difference between revisions
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|id=chr5:109122987..109123024,- | |id=chr5:109122987..109123024,- | ||
|ontology_enrichment_celltype=CL:0000221!5.59e-07!44;CL:0000133!5.59e-07!44 | |ontology_enrichment_celltype=CL:0000221!5.59e-07!44;CL:0000133!5.59e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.89e-07,44;CL:0000133,2.89e-07,44;CL:0002319,9.80e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.95e-12!73;UBERON:0005743!3.95e-12!73;UBERON:0000073!2.11e-11!75;UBERON:0001016!2.11e-11!75;UBERON:0004121!7.47e-10!102;UBERON:0000924!7.47e-10!102;UBERON:0006601!7.47e-10!102;UBERON:0002346!4.19e-09!71;UBERON:0003075!4.19e-09!71;UBERON:0007284!4.19e-09!71;UBERON:0000033!9.06e-09!63;UBERON:0001049!1.56e-08!52;UBERON:0005068!1.56e-08!52;UBERON:0006241!1.56e-08!52;UBERON:0007135!1.56e-08!52;UBERON:0003056!3.24e-08!49 | |ontology_enrichment_uberon=UBERON:0001017!3.95e-12!73;UBERON:0005743!3.95e-12!73;UBERON:0000073!2.11e-11!75;UBERON:0001016!2.11e-11!75;UBERON:0004121!7.47e-10!102;UBERON:0000924!7.47e-10!102;UBERON:0006601!7.47e-10!102;UBERON:0002346!4.19e-09!71;UBERON:0003075!4.19e-09!71;UBERON:0007284!4.19e-09!71;UBERON:0000033!9.06e-09!63;UBERON:0001049!1.56e-08!52;UBERON:0005068!1.56e-08!52;UBERON:0006241!1.56e-08!52;UBERON:0007135!1.56e-08!52;UBERON:0003056!3.24e-08!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.67e-12,73;UBERON:0001016,1.61e-11,75;UBERON:0002346,2.11e-11,64;UBERON:0003075,2.11e-11,64;UBERON:0007284,2.11e-11,64;UBERON:0004121,4.24e-11,95;UBERON:0000924,4.24e-11,95;UBERON:0006601,4.24e-11,95;UBERON:0010371,4.93e-10,73;UBERON:0001049,1.97e-08,52;UBERON:0005068,1.97e-08,52;UBERON:0006241,1.97e-08,52;UBERON:0007135,1.97e-08,52;UBERON:0000073,3.74e-08,54;UBERON:0003056,4.62e-08,49;UBERON:0010314,3.71e-07,92 | |||
|phase1_expression=9.76907967339243,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.297872853602656,0.261199789138935,0,0,0,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,1.76255545165808,1.92616169317078,1.28482726513177,0,15.0437357902508,14.7189742432096,12.4435135407541,2.65974201088189,8.62515386189829,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,2.63011399117477,1.5869729378161,0,1.35537812827653,0,0.449949858640699,0,0,15.2796056364386,26.5110630671873,1.65903379693564,1.4850653216486,0.420649922702764,5.14171771926846,6.18431914664518,2.57230678351403,1.53352753629178,0.919218786610021,1.10115880999389,2.17068474744819,1.68967186581868,1.18697658957174,1.18933936683133,1.56274011167028,2.79182999001381,2.25105044012672,2.90316670775939,3.83017161115768,6.40672563595963,2.42319279572891,0.757261933331841,0.151143120213571,0.869593466105033,0,0,0,0,0,0.702222100658759,2.72688516124892,2.07828803682295,2.82671659608272,17.182897212755,3.84979432242953,0,7.11066703153331,0.216491041011214,0,0,0.45673551887624,0.258937883647172,0.148442139064825,0.867426633830679,1.52232739156071,0,0.150722640552623,1.17588707135705,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,3.72063754879041,1.10420759230197,2.42437626567611,0,1.17112318804619,0.83778682725382,0.766371165625774,0,0,0,2.69623150928681,2.28750301409313,2.26177833803156,2.43354048269187,0.511430914660661,2.49345653471472,2.27137768294861,2.34230536855727,1.36847667671102,1.26361379216837,0.420883711772948,4.94457683258274,3.67843367093557,2.16074555766419,3.76762044589288,1.90502197623718,3.45907044769094,2.71735001223214,2.84573707812917,1.5089759505299,4.72765200419548,2.46331573829528,5.04150184583422,5.28289773528636,4.52727816478817,2.88094990971121,4.17971960318836,0,0,0,2.69263504296152,3.51789089971644,2.34080679899319,2.84093682702252,1.77087808572663,1.54267112887378,0.930135779001631,1.3413670069981,1.40118410840603,0.329119699826961,0.656669856316381,0.648550476366846,0.730999937126662,0.439100230582101,0.536825675041487,2.10289948564127,0.92614151141356,0.330418782983798,0,3.62590025909898,3.48355007790658,1.80414445850931,1.00841762311671,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,0.502670417600539,1.59165177632921,1.16978452271472,0,0.648414149624083,0.597423819763102,3.98302592001472,2.85621281524322,2.25415471346161,1.4255592949172,2.71533482034676,2.10407459670956,1.83385957660346,1.03327103585722,0.784993639206874,0.863780147452604,0,0.667380422864376,0.589676985339609,0.674586337154561,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,3.41084541186873,2.28150967018836,3.22515662972857,2.34690248288502,0.670025029767263,0.952174563544055,1.17080188714679,2.04925687338048,1.99318220683897,1.2756381492599,0.327726629431476,1.03610989119537,0.144649058581512,0,0,0.491764273019036,1.37968373152366,3.37156238974363,2.10981035865966,0.983609672260053,1.26235463602186,2.83957397474631,1.95219372148319,3.66219776145758,1.43381278771531,2.89638276307112,1.98153571552183,3.23848561339915,2.33804686329049,1.58115111178609,1.28528526568723,1.84522110770749,2.67098405500883,3.58351310577867,2.96946221350564,0,2.18502572539483,3.02323556964751,1.32023555829129,0.885905678642318,0.922305443831782,0.775284879504663,2.90826983582004,1.42598951353889,0,0,0,1.02131881726136,5.221771726908,6.72665155670323,5.35842587578981,2.83744373827638,1.60531935841864,1.97458824722545,1.8267896946876,0,0,0,0.49465875882444,1.29171541356724,0.422190474497091,0.238744688006273,0.820704498725306,1.1659233465194,2.78137953015765,0.512612642393558,1.65109494370578,0.370389054739423,0.565105371014073,0.546776910884101,0,0.169978429993855,0,0.138199973804424,0,3.32152793260192,2.03319467126849,1.40406943068342,1.88179466413022,2.40198820120795,2.02296519577231,1.81837602595739,0.26175594198403,1.42576470620972,1.24267862617385,0.56369293868419,2.24274819065968,2.64733584731356,4.4723773319131,3.48731523389874,6.42033276864957,5.28107573905893,2.47388331203505,2.9360616439199,0.483168241652012,0.864090018773596,0.316011120628178,0.810900861160657,1.33524244314275,0.51968329191118,0.716106782669926,0.39736270956253,0.240390899039938,0,0,0.0762068066549998,0,0,0.288635524920988,0.233753804363138,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,1.28206136987086,0.857473516316263,1.00314420807073,1.6942555278512,1.38097570952153,2.29158205375759,2.57779773515531,4.11049511862385,2.2661816921691,3.37511250115903,2.2516060161211,2.26571204492102,2.5888015587591,2.80225838477277,7.18244772121856,3.92687293234509,1.45864030240976,2.09613162627982,2.206122101400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|phase1_expression=9.76907967339243,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.297872853602656,0.261199789138935,0,0,0,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,1.76255545165808,1.92616169317078,1.28482726513177,0,15.0437357902508,14.7189742432096,12.4435135407541,2.65974201088189,8.62515386189829,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,2.63011399117477,1.5869729378161,0,1.35537812827653,0,0.449949858640699,0,0,15.2796056364386,26.5110630671873,1.65903379693564,1.4850653216486,0.420649922702764,5.14171771926846,6.18431914664518,2.57230678351403,1.53352753629178,0.919218786610021,1.10115880999389,2.17068474744819,1.68967186581868,1.18697658957174,1.18933936683133,1.56274011167028,2.79182999001381,2.25105044012672,2.90316670775939,3.83017161115768,6.40672563595963,2.42319279572891,0.757261933331841,0.151143120213571,0.869593466105033,0,0,0,0,0,0.702222100658759,2.72688516124892,2.07828803682295,2.82671659608272,17.182897212755,3.84979432242953,0,7.11066703153331,0.216491041011214,0,0,0.45673551887624,0.258937883647172,0.148442139064825,0.867426633830679,1.52232739156071,0,0.150722640552623,1.17588707135705,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,3.72063754879041,1.10420759230197,2.42437626567611,0,1.17112318804619,0.83778682725382,0.766371165625774,0,0,0,2.69623150928681,2.28750301409313,2.26177833803156,2.43354048269187,0.511430914660661,2.49345653471472,2.27137768294861,2.34230536855727,1.36847667671102,1.26361379216837,0.420883711772948,4.94457683258274,3.67843367093557,2.16074555766419,3.76762044589288,1.90502197623718,3.45907044769094,2.71735001223214,2.84573707812917,1.5089759505299,4.72765200419548,2.46331573829528,5.04150184583422,5.28289773528636,4.52727816478817,2.88094990971121,4.17971960318836,0,0,0,2.69263504296152,3.51789089971644,2.34080679899319,2.84093682702252,1.77087808572663,1.54267112887378,0.930135779001631,1.3413670069981,1.40118410840603,0.329119699826961,0.656669856316381,0.648550476366846,0.730999937126662,0.439100230582101,0.536825675041487,2.10289948564127,0.92614151141356,0.330418782983798,0,3.62590025909898,3.48355007790658,1.80414445850931,1.00841762311671,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,0.502670417600539,1.59165177632921,1.16978452271472,0,0.648414149624083,0.597423819763102,3.98302592001472,2.85621281524322,2.25415471346161,1.4255592949172,2.71533482034676,2.10407459670956,1.83385957660346,1.03327103585722,0.784993639206874,0.863780147452604,0,0.667380422864376,0.589676985339609,0.674586337154561,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,3.41084541186873,2.28150967018836,3.22515662972857,2.34690248288502,0.670025029767263,0.952174563544055,1.17080188714679,2.04925687338048,1.99318220683897,1.2756381492599,0.327726629431476,1.03610989119537,0.144649058581512,0,0,0.491764273019036,1.37968373152366,3.37156238974363,2.10981035865966,0.983609672260053,1.26235463602186,2.83957397474631,1.95219372148319,3.66219776145758,1.43381278771531,2.89638276307112,1.98153571552183,3.23848561339915,2.33804686329049,1.58115111178609,1.28528526568723,1.84522110770749,2.67098405500883,3.58351310577867,2.96946221350564,0,2.18502572539483,3.02323556964751,1.32023555829129,0.885905678642318,0.922305443831782,0.775284879504663,2.90826983582004,1.42598951353889,0,0,0,1.02131881726136,5.221771726908,6.72665155670323,5.35842587578981,2.83744373827638,1.60531935841864,1.97458824722545,1.8267896946876,0,0,0,0.49465875882444,1.29171541356724,0.422190474497091,0.238744688006273,0.820704498725306,1.1659233465194,2.78137953015765,0.512612642393558,1.65109494370578,0.370389054739423,0.565105371014073,0.546776910884101,0,0.169978429993855,0,0.138199973804424,0,3.32152793260192,2.03319467126849,1.40406943068342,1.88179466413022,2.40198820120795,2.02296519577231,1.81837602595739,0.26175594198403,1.42576470620972,1.24267862617385,0.56369293868419,2.24274819065968,2.64733584731356,4.4723773319131,3.48731523389874,6.42033276864957,5.28107573905893,2.47388331203505,2.9360616439199,0.483168241652012,0.864090018773596,0.316011120628178,0.810900861160657,1.33524244314275,0.51968329191118,0.716106782669926,0.39736270956253,0.240390899039938,0,0,0.0762068066549998,0,0,0.288635524920988,0.233753804363138,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,1.28206136987086,0.857473516316263,1.00314420807073,1.6942555278512,1.38097570952153,2.29158205375759,2.57779773515531,4.11049511862385,2.2661816921691,3.37511250115903,2.2516060161211,2.26571204492102,2.5888015587591,2.80225838477277,7.18244772121856,3.92687293234509,1.45864030240976,2.09613162627982,2.206122101400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| ||
|short_description=p@chr5:109122987..109123024,- | |short_description=p@chr5:109122987..109123024,- | ||
}} | }} |
Revision as of 02:25, 14 November 2012
Short description: | p@chr5:109122987..109123024, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:109122987..109123024, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.89e-07 | 44 |
neurectodermal cell | 2.89e-07 | 44 |
neural cell | 9.80e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.67e-12 | 73 |
nervous system | 1.61e-11 | 75 |
neurectoderm | 2.11e-11 | 64 |
neural plate | 2.11e-11 | 64 |
presumptive neural plate | 2.11e-11 | 64 |
ectoderm-derived structure | 4.24e-11 | 95 |
ectoderm | 4.24e-11 | 95 |
presumptive ectoderm | 4.24e-11 | 95 |
ecto-epithelium | 4.93e-10 | 73 |
neural tube | 1.97e-08 | 52 |
neural rod | 1.97e-08 | 52 |
future spinal cord | 1.97e-08 | 52 |
neural keel | 1.97e-08 | 52 |
regional part of nervous system | 3.74e-08 | 54 |
pre-chordal neural plate | 4.62e-08 | 49 |
structure with developmental contribution from neural crest | 3.71e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.