FFCP PHASE1:Mm9::chr13:55504397..55504418,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:55504397..55504418,+ | |id=chr13:55504397..55504418,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.08e-27!14;UBERON:0003918!7.08e-27!14;UBERON:0005095!7.08e-27!14;UBERON:0007687!7.08e-27!14;UBERON:0006554!2.27e-23!16;UBERON:0001008!6.31e-22!17;UBERON:0000489!1.61e-17!21;UBERON:0003103!6.56e-08!43;UBERON:0005172!8.79e-07!49;UBERON:0005173!8.79e-07!49;UBERON:0002417!8.79e-07!49;UBERON:0000916!8.79e-07!49 | |ontology_enrichment_uberon=UBERON:0002113!7.08e-27!14;UBERON:0003918!7.08e-27!14;UBERON:0005095!7.08e-27!14;UBERON:0007687!7.08e-27!14;UBERON:0006554!2.27e-23!16;UBERON:0001008!6.31e-22!17;UBERON:0000489!1.61e-17!21;UBERON:0003103!6.56e-08!43;UBERON:0005172!8.79e-07!49;UBERON:0005173!8.79e-07!49;UBERON:0002417!8.79e-07!49;UBERON:0000916!8.79e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.61e-30,14;UBERON:0003918,1.61e-30,14;UBERON:0011143,1.61e-30,14;UBERON:0005095,1.61e-30,14;UBERON:0007687,1.61e-30,14;UBERON:0006554,1.02e-23,18;UBERON:0001008,1.83e-22,19;UBERON:0000489,2.59e-20,21;UBERON:0003103,8.47e-10,43;UBERON:0005172,1.47e-08,49;UBERON:0005173,1.47e-08,49;UBERON:0002417,1.47e-08,49;UBERON:0000916,1.47e-08,49;UBERON:0003104,8.42e-07,61;UBERON:0009142,8.42e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0.610953983535943,1.55161989734101,3.0158402552837,2.90888070771584,6.34723636312289,8.00693511991011,18.8797660800355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0.610953983535943,1.55161989734101,3.0158402552837,2.90888070771584,6.34723636312289,8.00693511991011,18.8797660800355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p2@Slc34a1 | |short_description=p2@Slc34a1 | ||
}} | }} |
Revision as of 06:02, 14 November 2012
Short description: | p2@Slc34a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc34a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -146bp_to_uc007qqt.1_5end |
EntrezGene: | Slc34a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.61e-30 | 14 |
kidney mesenchyme | 1.61e-30 | 14 |
upper urinary tract | 1.61e-30 | 14 |
kidney rudiment | 1.61e-30 | 14 |
kidney field | 1.61e-30 | 14 |
urinary system structure | 1.02e-23 | 18 |
renal system | 1.83e-22 | 19 |
cavitated compound organ | 2.59e-20 | 21 |
compound organ | 8.47e-10 | 43 |
abdomen element | 1.47e-08 | 49 |
abdominal segment element | 1.47e-08 | 49 |
abdominal segment of trunk | 1.47e-08 | 49 |
abdomen | 1.47e-08 | 49 |
mesenchyme | 8.42e-07 | 61 |
entire embryonic mesenchyme | 8.42e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.