Personal tools

FFCP PHASE1:Mm9::chr4:115796223..115796300,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr4:115796223..115796300,-
|id=chr4:115796223..115796300,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=2.88267924788629,1.04692622291808,0,0,0.500895729946347,4.02910252588535,2.33612640595526,0.258246646883153,0,0,0,0.159544317990673,0,0.0874204024189974,20.9859149943868,19.8425762042029,23.785103856357,2.68142840554502,2.33094537129756,1.69755860719212,2.8064285749853,20.8510997521859,18.5451850288644,5.27974995218242,3.89995777814189,0.57423196411502,2.58457197695445,1.29282739611533,4.94060890586572,5.29263272495855,5.32153225572731,17.7808588568697,20.9122027778754,15.8481681015439,18.1976520443303,17.6208724080002,18.1710727073509,5.02237956884289,7.813353445238,4.71171369576418,2.35292595212406,4.78131839470912,3.39857247121808,0.629484089877886,1.52065396829272,0.917733760808408,2.34717403304412,5.66865406589161,1.31811709640683,1.36100929351998,2.51975558925653,2.87505128729943,1.00669563634642,0.725362142011344,1.34437519656986,2.82985379639542,2.57880095944881,0,2.02316460859598,2.11596391708813,1.26766280701236,1.69422266034566,4.4464739805557,0.899899717281399,0,0,2.09720077362883,2.30530983192933,9.85051316930538,4.99521971827255,6.73039876324422,2.28520787523043,1.76694832761291,9.30930074033651,11.4056110511701,11.9498442259303,0,0.255374676170375,0.153606533256243,2.37395317914349,2.28719109006024,3.12548022334056,0.279182999001381,0.56276261003168,0.15279824777681,1.76777151284201,2.98980529678116,0.559198337475902,1.4387976733305,5.59229544790213,0.289864488701678,1.72084775396277,0,0,0,0,3.93244376368905,5.28333999991979,4.1565760736459,2.47337702157238,2.25349471642689,1.28326477414318,0,0,6.27824018932521,6.58735650235256,6.0662933401774,2.62622923353838,4.40194402200192,0.593768556259299,12.3174582003956,5.48037860961854,6.22661842591358,5.12456977878917,3.64524992120685,2.38766523526383,0.741584903203122,1.15679485535929,17.6922110389975,6.63244084784378,12.8088080707028,13.091631834651,1.86391761218122,0,0,4.34276993854605,18.5713442984176,11.3981518888747,20.4583065587634,0.299581278809645,0.915001205637253,2.1361239859187,0,0.767146371990992,0.20778804455956,0.324482526135515,5.80484373946803,8.8328949133166,0.252722758433675,0.210441855886474,17.1758984710769,11.4951052216736,11.884100567153,11.1521565198429,10.9538763633638,13.1957131893395,7.12133106653939,0.517406741478031,22.6346392579484,17.3977593754394,11.4368230706567,9.42541649438572,6.11703948296315,5.92028683087683,4.32142486456681,13.733364410476,13.3420505589515,9.52187256324446,19.8914449576915,14.9130556225561,12.8989332989603,8.28285482720668,13.0209604571866,7.47704080640135,7.25055430570678,7.44108623201305,6.17028823219124,2.6856028744449,5.9241545968853,3.11918181750281,0.486412857275134,0.584799949701329,1.97595103761946,0.268412837520744,0.210289948564127,2.05809224758569,1.65209391491899,5.02456076660734,14.0770245353254,11.8440702648824,13.788818361464,8.67239155880373,9.33987784148455,4.1849637744763,7.59246498471219,3.62337700392824,3.01602250560323,3.18330355265841,3.11942539390592,6.29173586057955,4.53889904736858,2.98711909881551,10.8110703543257,11.6533482861923,11.270773567308,10.7935203758017,7.75809948670503,3.71719845418688,4.42655759869801,1.47610147979602,2.04098346193787,0.987177311374404,0,23.024624588821,21.6214894624523,24.7348323623339,24.7489348093974,16.1588697034119,10.4396599230382,11.7955416354832,8.59316701907687,7.96228098245436,7.18841032636773,4.09355042435354,2.49630138491648,2.27320990152401,2.33216637578486,0,2.21703828199926,14.7803301180978,14.1779529504563,10.3544502322865,11.2651319178481,5.3602002381381,0.952174563544055,0.195133647857799,3.94087860265477,3.5434350343804,2.39182152986231,0.491589944147214,1.38147985492716,1.59113964439663,1.50791283939272,2.17562273527484,5.90117127622843,2.48343071674259,0.321101179975584,0.468846746368813,6.39346286969034,0.504941854408746,11.9893123378178,15.6175497718655,8.18608911384636,14.5770966751057,5.79276552614225,9.6246020468203,14.9779959619711,10.5212108848072,6.7198922250909,0,3.26462195979018,8.01295216502649,4.39794790254655,2.8044920905331,1.32745138339963,7.76898035695941,6.04647113929502,6.03536255218874,4.72483028609236,3.07435147943927,3.6179961043551,6.18007340111759,5.70395805415554,1.58018378967908,0,0,1.02131881726136,13.5045820523483,7.1147276080515,6.43011105094777,5.49754724291048,3.38900753443934,4.11372551505302,2.13125464380219,5.86679270159276,0.63549621259146,0.441056796109924,1.48397627647332,1.93757312035087,7.11692514152239,4.41677672811605,2.46211349617592,3.49777003955821,0.556275906031529,23.4093106693058,10.9385040020508,16.8527019906438,27.8785316366943,36.3606645737927,19.9037010689675,8.32894306969891,11.3360676382163,8.153798454461,1.90934123603023,15.6586316822662,10.775931757723,9.28845931067491,5.85447228840512,5.45906409365444,7.01294601201068,3.14083131756277,0.785267825952089,2.59229946583586,0,8.45539408026285,13.90503878209,15.7185565934243,11.8615224889869,9.94530640778529,9.96841140395591,5.28107573905893,10.54655517236,9.54220034273969,12.3207901621263,9.21696020025169,9.48033361884535,10.3389859797984,14.9957997460648,15.7204195803132,21.6622301757653,18.0800032850951,14.6638448414362,17.7227432609493,17.4671958410295,16.079636204205,14.1156659191577,10.0381617161945,11.1605736302782,8.6488907614361,0.680191150845634,9.10142408833665,12.1113706422792,6.2117308054709,0.386379188064381,1.68914227906064,2.19781949120718,4.07299920250225,0,0,0,0,0.515559547031063,0,0,0,0.900642406448441,0,0,18.785509912736,13.9658705690361,12.2928196142977,8.99494853152688,8.17491334249131,6.06683577885047,5.778414922842,4.73880631649457,5.45562656306086,4.54854981174835,3.29523089857312,6.03604292435444,7.49132059759059,5.25006249719928,7.75378830900779,6.19181798667996,4.86714168968393,5.59436739344745,8.24171801606613,5.00476328456951,8.57173130963539,4.61437096014278,8.82213902805088,6.97662799835177,5.36423468367385,5.49994951295897,5.85369513192872,7.3659519202596,5.29636043998861,4.48913817326191,4.50813068871862,4.92522411877817,4.91077251803627,6.19747364743864,4.24394544158511,3.49734809113124,5.6143586026898,2.14871054048298,2.67803664896381,3.75005412503176,4.40548887678801
|phase1_expression=2.88267924788629,1.04692622291808,0,0,0.500895729946347,4.02910252588535,2.33612640595526,0.258246646883153,0,0,0,0.159544317990673,0,0.0874204024189974,20.9859149943868,19.8425762042029,23.785103856357,2.68142840554502,2.33094537129756,1.69755860719212,2.8064285749853,20.8510997521859,18.5451850288644,5.27974995218242,3.89995777814189,0.57423196411502,2.58457197695445,1.29282739611533,4.94060890586572,5.29263272495855,5.32153225572731,17.7808588568697,20.9122027778754,15.8481681015439,18.1976520443303,17.6208724080002,18.1710727073509,5.02237956884289,7.813353445238,4.71171369576418,2.35292595212406,4.78131839470912,3.39857247121808,0.629484089877886,1.52065396829272,0.917733760808408,2.34717403304412,5.66865406589161,1.31811709640683,1.36100929351998,2.51975558925653,2.87505128729943,1.00669563634642,0.725362142011344,1.34437519656986,2.82985379639542,2.57880095944881,0,2.02316460859598,2.11596391708813,1.26766280701236,1.69422266034566,4.4464739805557,0.899899717281399,0,0,2.09720077362883,2.30530983192933,9.85051316930538,4.99521971827255,6.73039876324422,2.28520787523043,1.76694832761291,9.30930074033651,11.4056110511701,11.9498442259303,0,0.255374676170375,0.153606533256243,2.37395317914349,2.28719109006024,3.12548022334056,0.279182999001381,0.56276261003168,0.15279824777681,1.76777151284201,2.98980529678116,0.559198337475902,1.4387976733305,5.59229544790213,0.289864488701678,1.72084775396277,0,0,0,0,3.93244376368905,5.28333999991979,4.1565760736459,2.47337702157238,2.25349471642689,1.28326477414318,0,0,6.27824018932521,6.58735650235256,6.0662933401774,2.62622923353838,4.40194402200192,0.593768556259299,12.3174582003956,5.48037860961854,6.22661842591358,5.12456977878917,3.64524992120685,2.38766523526383,0.741584903203122,1.15679485535929,17.6922110389975,6.63244084784378,12.8088080707028,13.091631834651,1.86391761218122,0,0,4.34276993854605,18.5713442984176,11.3981518888747,20.4583065587634,0.299581278809645,0.915001205637253,2.1361239859187,0,0.767146371990992,0.20778804455956,0.324482526135515,5.80484373946803,8.8328949133166,0.252722758433675,0.210441855886474,17.1758984710769,11.4951052216736,11.884100567153,11.1521565198429,10.9538763633638,13.1957131893395,7.12133106653939,0.517406741478031,22.6346392579484,17.3977593754394,11.4368230706567,9.42541649438572,6.11703948296315,5.92028683087683,4.32142486456681,13.733364410476,13.3420505589515,9.52187256324446,19.8914449576915,14.9130556225561,12.8989332989603,8.28285482720668,13.0209604571866,7.47704080640135,7.25055430570678,7.44108623201305,6.17028823219124,2.6856028744449,5.9241545968853,3.11918181750281,0.486412857275134,0.584799949701329,1.97595103761946,0.268412837520744,0.210289948564127,2.05809224758569,1.65209391491899,5.02456076660734,14.0770245353254,11.8440702648824,13.788818361464,8.67239155880373,9.33987784148455,4.1849637744763,7.59246498471219,3.62337700392824,3.01602250560323,3.18330355265841,3.11942539390592,6.29173586057955,4.53889904736858,2.98711909881551,10.8110703543257,11.6533482861923,11.270773567308,10.7935203758017,7.75809948670503,3.71719845418688,4.42655759869801,1.47610147979602,2.04098346193787,0.987177311374404,0,23.024624588821,21.6214894624523,24.7348323623339,24.7489348093974,16.1588697034119,10.4396599230382,11.7955416354832,8.59316701907687,7.96228098245436,7.18841032636773,4.09355042435354,2.49630138491648,2.27320990152401,2.33216637578486,0,2.21703828199926,14.7803301180978,14.1779529504563,10.3544502322865,11.2651319178481,5.3602002381381,0.952174563544055,0.195133647857799,3.94087860265477,3.5434350343804,2.39182152986231,0.491589944147214,1.38147985492716,1.59113964439663,1.50791283939272,2.17562273527484,5.90117127622843,2.48343071674259,0.321101179975584,0.468846746368813,6.39346286969034,0.504941854408746,11.9893123378178,15.6175497718655,8.18608911384636,14.5770966751057,5.79276552614225,9.6246020468203,14.9779959619711,10.5212108848072,6.7198922250909,0,3.26462195979018,8.01295216502649,4.39794790254655,2.8044920905331,1.32745138339963,7.76898035695941,6.04647113929502,6.03536255218874,4.72483028609236,3.07435147943927,3.6179961043551,6.18007340111759,5.70395805415554,1.58018378967908,0,0,1.02131881726136,13.5045820523483,7.1147276080515,6.43011105094777,5.49754724291048,3.38900753443934,4.11372551505302,2.13125464380219,5.86679270159276,0.63549621259146,0.441056796109924,1.48397627647332,1.93757312035087,7.11692514152239,4.41677672811605,2.46211349617592,3.49777003955821,0.556275906031529,23.4093106693058,10.9385040020508,16.8527019906438,27.8785316366943,36.3606645737927,19.9037010689675,8.32894306969891,11.3360676382163,8.153798454461,1.90934123603023,15.6586316822662,10.775931757723,9.28845931067491,5.85447228840512,5.45906409365444,7.01294601201068,3.14083131756277,0.785267825952089,2.59229946583586,0,8.45539408026285,13.90503878209,15.7185565934243,11.8615224889869,9.94530640778529,9.96841140395591,5.28107573905893,10.54655517236,9.54220034273969,12.3207901621263,9.21696020025169,9.48033361884535,10.3389859797984,14.9957997460648,15.7204195803132,21.6622301757653,18.0800032850951,14.6638448414362,17.7227432609493,17.4671958410295,16.079636204205,14.1156659191577,10.0381617161945,11.1605736302782,8.6488907614361,0.680191150845634,9.10142408833665,12.1113706422792,6.2117308054709,0.386379188064381,1.68914227906064,2.19781949120718,4.07299920250225,0,0,0,0,0.515559547031063,0,0,0,0.900642406448441,0,0,18.785509912736,13.9658705690361,12.2928196142977,8.99494853152688,8.17491334249131,6.06683577885047,5.778414922842,4.73880631649457,5.45562656306086,4.54854981174835,3.29523089857312,6.03604292435444,7.49132059759059,5.25006249719928,7.75378830900779,6.19181798667996,4.86714168968393,5.59436739344745,8.24171801606613,5.00476328456951,8.57173130963539,4.61437096014278,8.82213902805088,6.97662799835177,5.36423468367385,5.49994951295897,5.85369513192872,7.3659519202596,5.29636043998861,4.48913817326191,4.50813068871862,4.92522411877817,4.91077251803627,6.19747364743864,4.24394544158511,3.49734809113124,5.6143586026898,2.14871054048298,2.67803664896381,3.75005412503176,4.40548887678801
|short_description=p1@Rad54l
|short_description=p1@Rad54l
}}
}}

Revision as of 08:36, 14 November 2012

Short description:p1@Rad54l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rad54l_5end
Coexpression cluster:MCL_coexpression_mm9:151
Association with transcript: 0bp_to_ENSMUST00000102704, ENSMUST00000102705, ENSMUST00000143089, NM_001122958, NM_001122959, NM_009015, uc008ugb.2, uc008ugc.2, uc008ugd.2, uc008uge.2_5end
EntrezGene:Rad54l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rad54l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.84
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.62
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F95.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.57
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.46
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C617.18
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C610.95
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E222.63
forelimb, embryo E12.CNhs10600.359-14H217.40
forelimb, embryo E13.CNhs10589.384-1E211.44
forelimb, embryo E14.CNhs10577.413-26A89.43
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I613.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.89
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D413.02
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I514.08
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D813.79
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F811.65
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D54.43
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F823.02
liver, embryo E13.CNhs10524.378-3H621.62
liver, embryo E14.CNhs10594.409-16E124.73
liver, embryo E15.CNhs10520.433-16D724.75
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G214.78
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C510.35
lung, embryo E16.CNhs10998.458-17B611.27
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E613.50
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G223.41
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F216.85
spleen, neonate N10.CNhs11116.752-24D127.88
spleen, neonate N20.CNhs11112.824-19H136.36
spleen, neonate N25.CNhs11099.1354-25G319.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E315.66
stomach, embryo E15.CNhs10603.1252-16G810.78
stomach, embryo E16.CNhs11022.459-17D49.29
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F513.91
testis, embryo E15.CNhs11034.443-27C515.72
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I59.95
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I410.55
testis, neonate N10.CNhs11204.763-44D99.54
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I215.00
thymus, embryo E16.CNhs11002.456-26C515.72
thymus, embryo E17.CNhs10581.478-18C121.66
thymus, embryo E18.CNhs10595.1273-19G418.08
thymus, neonate N02.CNhs11181.1541-43F814.66
thymus, neonate N03.CNhs11137.2104-43C717.72
thymus, neonate N06.CNhs11197.681-26C417.47
thymus, neonate N07.CNhs11211.713-19D316.08
thymus, neonate N10.CNhs11194.748-24E414.12
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G711.16
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.21
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I818.79
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:115796223..115796300,-&oldid=2309198"